prot_P-fluviatile_contig10.730.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig10.730.1
Unique Nameprot_P-fluviatile_contig10.730.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length551
Homology
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BLAST of mRNA_P-fluviatile_contig10.730.1 vs. uniprot
Match: D7FXQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ3_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.570e-10
Identity = 56/122 (45.90%), Postives = 66/122 (54.10%), Query Frame = 0 
Query:  160 RADLVALLDELGLSGSDILPEKSKMSKALSGLEDGWELVGLDGSGGPEMVRIVGXXXXXXXX------RSAPRLMLEE--LGMKPGDVAAVVTSYPLLLAVTAENARAVVKWLESRGGLSSK 273
            + DL ALLD L L   D+LPE SK S+AL GL       G +     +  R VG               SAP +ML+   +GMK  +VAAVV SYPLLL V A  AR+VV WL  R GLSSK
Sbjct:  113 KQDLAALLDVLQLKERDVLPELSKKSRALLGLG------GEEALQDSDTARAVGDNVQRSGTDGYGRRSSAPWVMLDRKGVGMKADEVAAVVRSYPLLLTVGAGQARSVVNWLTRRAGLSSK 228
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BLAST of mRNA_P-fluviatile_contig10.730.1 vs. uniprot
Match: A0A6H5KY24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY24_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 5.290e-10
Identity = 54/115 (46.96%), Postives = 64/115 (55.65%), Query Frame = 0 
Query:  160 RADLVALLDELGLSGSDILPEKSKMSKALSGLEDGWELVGLDGSGGPEMVRIVGXXXXXXXXR--SAPRLMLEE--LGMKPGDVAAVVTSYPLLLAVTAENARAVVKWLESRGGL 270
            + DL ALLD L L   D+LPE SK S+AL GL  G E    D +    +   V         R  SAP +ML+   +GMK  +VAAVV SYPLLL V A  AR+VV WL  R GL
Sbjct:    2 KQDLAALLDVLQLKERDVLPELSKKSRALLGL--GGEEALQDSNTARAVGDTVQRKGTDGYGRRSSAPWVMLDRKGVGMKADEVAAVVRSYPLLLTVDAGQARSVVSWLTRRAGL 114
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXQ3_ECTSI1.570e-1045.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY24_9PHAE5.290e-1046.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 240..270
e-value: 680.0
score: 5.2
coord: 422..454
e-value: 0.0025
score: 27.1
coord: 496..528
e-value: 0.0047
score: 26.1
coord: 313..344
e-value: 0.032
score: 23.4
coord: 349..380
e-value: 71.0
score: 12.3
coord: 459..491
e-value: 1.6
score: 17.7
coord: 276..307
e-value: 0.21
score: 20.6
coord: 385..417
e-value: 0.012
score: 24.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 384..548
e-value: 5.7E-20
score: 71.5
coord: 228..377
e-value: 1.9E-16
score: 59.9
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 284..400
e-value: 6.7E-20
score: 73.4
coord: 401..549
e-value: 5.5E-31
score: 109.7
NoneNo IPR availablePANTHERPTHR13068:SF78MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 355..547
coord: 197..472
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 197..472
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 355..547

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig10contigP-fluviatile_contig10:1565514..1572588 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig10.730.1mRNA_P-fluviatile_contig10.730.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig10 1565487..1573038 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig10.730.1 ID=prot_P-fluviatile_contig10.730.1|Name=mRNA_P-fluviatile_contig10.730.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=551bp
MQCMLAGIWQQPGTFAFNVHIGLPVRTEGRAHINFSRPQHMGCNSKRAPA
TTAGTLTPATSRTLTPGPGLQRPYSTLALLETPRTAPAAAQAPSADAHRR
RKRNLAAASSSAWSSKGSVASRRGCGLEARAAVAAVAALPSTSDSSVAAE
AADAQNGIDRADLVALLDELGLSGSDILPEKSKMSKALSGLEDGWELVGL
DGSGGPEMVRIVGGGGGGGGRRSAPRLMLEELGMKPGDVAAVVTSYPLLL
AVTAENARAVVKWLESRGGLSSKQIAKVVRSHPATLRYDVEKRLQPRAVW
LEKEGVTTRAGIGKVISKAPQMLGLTEAKLSPKTAWLQSYLGLSPESVAG
VMKAFPPVLILSIENLEGKVAWLQKRLDLDRVAVSKVLRLNPSIFGSKID
SSLEPKLKWLRESLGLEEADVAAVVRAHPSILSYSVTENLVPTTDWLQKR
MRLDQEGVAAMVRTFPSILGLSPATNIETKLSWLRENLDLDEERLLGLVK
TCPQLFGCSVKANLGPTLRFFRERLGGSREEIKELVLSNPTLLRYSLKKG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf