mRNA_P-fluviatile_contig10.730.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.730.1 vs. uniprot
Match: A0A6H5LCH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCH8_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 1.380e-8 Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 3
Query: 1677 MIPRARAIENAGLGPPVFGQHVKPIAAYTDSAFAAWLDSL 1796
M+PRA AIE +GLG VF +HVKPIAAYTD AF AWLDSL
Sbjct: 1 MMPRAMAIEKSGLGRLVFREHVKPIAAYTDPAFEAWLDSL 40 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.730.1 >prot_P-fluviatile_contig10.730.1 ID=prot_P-fluviatile_contig10.730.1|Name=mRNA_P-fluviatile_contig10.730.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=551bp MQCMLAGIWQQPGTFAFNVHIGLPVRTEGRAHINFSRPQHMGCNSKRAPAback to top mRNA from alignment at P-fluviatile_contig10:1565487..1573038+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.730.1 ID=mRNA_P-fluviatile_contig10.730.1|Name=mRNA_P-fluviatile_contig10.730.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7552bp|location=Sequence derived from alignment at P-fluviatile_contig10:1565487..1573038+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:1565487..1573038+ >mRNA_P-fluviatile_contig10.730.1 ID=mRNA_P-fluviatile_contig10.730.1|Name=mRNA_P-fluviatile_contig10.730.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3306bp|location=Sequence derived from alignment at P-fluviatile_contig10:1565487..1573038+ (Porterinema fluviatile SAG_2381)back to top |