prot_P-fluviatile_contig1.542.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.542.1
Unique Nameprot_P-fluviatile_contig1.542.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length100
Homology
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BLAST of mRNA_P-fluviatile_contig1.542.1 vs. uniprot
Match: A0A6H5JGB4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGB4_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 5.080e-42
Identity = 81/100 (81.00%), Postives = 86/100 (86.00%), Query Frame = 0 
Query:    1 MNALRSARPTAVVKAAAARLATNSRGRKIVRDPRKAKKRPSASTALEEVREEERAPAPP-FQPFLQQPSTPQSLGSSMAQSMIWGVGMALAFTAVGMFFR 99
            MNA+RSARP A + AA ARLAT+SRGRKIVRDPRKAK+RP ASTALEEVREEERAPA P FQPFLQQ   PQ+ GSSM QSM WGVGMALAFTAVGM FR
Sbjct:    1 MNAVRSARPRAAMNAAVARLATSSRGRKIVRDPRKAKQRPRASTALEEVREEERAPAAPKFQPFLQQDPAPQTFGSSMLQSMTWGVGMALAFTAVGMMFR 100
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BLAST of mRNA_P-fluviatile_contig1.542.1 vs. uniprot
Match: V9F8I3_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=V9F8I3_PHYPR)

HSP 1 Score: 49.3 bits (116), Expect = 2.340e-5
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:   55 APAPPFQPFLQ-QPSTPQSLGSSMAQSMIWGVGMALAFTAVGMFF 98
            AP PP  PF+Q +  TPQ+ G  M +S +WG+GMA AF+ VG+ F
Sbjct:   58 APPPPANPFVQSEQQTPQTFGGVMKESFVWGLGMAAAFSVVGIIF 102
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BLAST of mRNA_P-fluviatile_contig1.542.1 vs. uniprot
Match: V9F9J0_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9F9J0_PHYPR)

HSP 1 Score: 49.3 bits (116), Expect = 2.930e-5
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:   55 APAPPFQPFLQ-QPSTPQSLGSSMAQSMIWGVGMALAFTAVGMFF 98
            AP PP  PF+Q +  TPQ+ G  M +S +WG+GMA AF+ VG+ F
Sbjct:   58 APPPPANPFVQSEQQTPQTFGGVMKESFVWGLGMAAAFSVVGIIF 102
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BLAST of mRNA_P-fluviatile_contig1.542.1 vs. uniprot
Match: H3H280_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H280_PHYRM)

HSP 1 Score: 48.5 bits (114), Expect = 5.900e-5
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:   55 APAPPFQPFLQ-QPSTPQSLGSSMAQSMIWGVGMALAFTAVGMFF 98
            AP PP  PF+Q +   PQS G  M +S +WG+GMA+AF+ VG+ F
Sbjct:   54 APPPPANPFVQSEQQAPQSFGGVMKESFLWGMGMAVAFSVVGVVF 98
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JGB4_9PHAE5.080e-4281.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
V9F8I3_PHYPR2.340e-551.11Uncharacterized protein n=6 Tax=Phytophthora paras... [more]
V9F9J0_PHYPR2.930e-551.11Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
H3H280_PHYRM5.900e-551.11Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..99
NoneNo IPR availableTMHMMTMhelixcoord: 81..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5856701..5858927 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.542.1mRNA_P-fluviatile_contig1.542.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 5855624..5858934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.542.1 ID=prot_P-fluviatile_contig1.542.1|Name=mRNA_P-fluviatile_contig1.542.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=100bp
MNALRSARPTAVVKAAAARLATNSRGRKIVRDPRKAKKRPSASTALEEVR
EEERAPAPPFQPFLQQPSTPQSLGSSMAQSMIWGVGMALAFTAVGMFFR*
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