prot_P-fluviatile_contig1.540.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.540.1
Unique Nameprot_P-fluviatile_contig1.540.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length671
Homology
BLAST of mRNA_P-fluviatile_contig1.540.1 vs. uniprot
Match: D7FGR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR2_ECTSI)

HSP 1 Score: 508 bits (1307), Expect = 1.380e-168
Identity = 354/715 (49.51%), Postives = 421/715 (58.88%), Query Frame = 0
Query:    1 MQPDDIHFAVVWPTAHDGPARKARQCPLSCPEDCSVIVPFQCSLAEASTTVGCFAASHRKLPC--GVGEIETSVLGSFCMFSSPTSVPPALIVVGTKSWSCASSVFAFIRCVQADLARDQADFGYWQLRSLALRTEAVVPSPGDESSNVLP-RLLEEYNWDDEQSESWEDDDMWLG-TADAAEISNAKAEMDGLRSEATTDASQLQRI--ADLQVEAFVPSEDQNSSRVPAAPLLE----QAYPQVPLIQVDLDDEPST---RXXXXXXXXQLRQHASPTVFDSGLAVVDQMASSVTDTGGENSSLIHSQHAPTPAAAITQTPGAPSCSSALSLDLDVR-AELSPLLGV-LSPSSEKDESSELPS-QAEDLS-MHVAPAKGRFNAAAATGAETPAGVDAPVAISGDAGEAAAAAITANAEG------------NTDVSQAAAAGTTV------------------AVSAAVSEDLAYVHQGSVLKSFAITGSVLVAASHGARARLRITDKHGHIANATAISVVAAENTAGSISPTREYVCKAGPVQQAGAPPKFLRAVAYRCSPAVKILPVRVTCRLNSAGNSLLVWAQVIANPQLPQPLCGVSVLVSLPFSPRNEGHVQSEPPATLKPDRKMLEWVLPMKMKPGGKQVMQARLIIDEGQMAGAAIQQTAPAMVKCHLLDSTFSSVELEIAAMAEERGQVDAGRVMKRCRVQCTQ 668
            M P DIHFA VWP A DG ARK             VIVP QCSLAEAS TVG      RK P   G  +IET  LG FC+FS+ TS PPAL+VVGTKSW C+  VFAF+R VQ DLARD +DFG+WQLR LA R EA +   GD++S  +P RL E  NWDDE+SESWED+ MW   T D   ++ A A  D  R  +    S+  R     + +     S+  +++    A   E    QA   +PL ++  D  P     R        Q  Q  S   F  G  VVD+  S V D G     LI ++ AP   A  T  P +P+  +   L    + A  SPL     S S+  DE S L +  A DLS +  +  KGRFNA      + P+ V  P A+  +  + A   +     G              D   AAA GTT                    VSAAVSEDLAYVH+G  L+S+ ITGSVLVAAS GARA++R+TDK GHIA ATA   VA E  A +I  TREY+CK G VQ  GAPP+FL A+ YRCSPAVK+LPVRVTCRL +AGN +LVW QVIANPQL  PL GV VLV+LPFSPR+EG V+SEPPA+LK DRKMLEWVLP  M+ GGKQV+QARL  DEGQ+  AAI QTAPAMVKCHLLDSTFSSVELE+AA+AEE      G V+KRCRVQC Q
Sbjct:    1 MLPGDIHFAAVWPAAPDGAARK-------------VIVPLQCSLAEASRTVGNLVGLPRKQPPTPGASKIETLALGPFCVFSTSTSTPPALVVVGTKSWGCSPGVFAFLRRVQTDLARDPSDFGFWQLRHLASRVEASLHPAGDDASYAMPPRLFEGRNWDDEESESWEDEYMWSDETVDNDGLTGATAVPDDARDMSPVPVSEPLRSDGVSMALSPLTVSQPDDANARTGATKTEHTTGQADEGIPLNKMVFDGLPPKAPHRPTKPMTTDQRTQQPSGPGF--GSPVVDRRPSPVGDRGSPL--LIPAEQAP---ALATAQPASPNLDADKLLPPSAKGAGFSPLRSDGESSSATPDEVSGLQAVSAIDLSALTTSSMKGRFNAPVG---DQPSTVVGPAAVVKETVDGARTGVPGGETGIQPAAEPHAISPQVDALAAAATGTTADLQDRVGDAGPETEPDNATVSAAVSEDLAYVHRGPDLQSYGITGSVLVAASCGARAQVRVTDKQGHIATATAYPNVAEEKPAMAIPSTREYLCKPGAVQHGGAPPRFLPALMYRCSPAVKVLPVRVTCRLRTAGNRVLVWVQVIANPQLSHPLSGVLVLVNLPFSPRDEGDVKSEPPASLKMDRKMLEWVLPSGMQRGGKQVLQARLSADEGQVRVAAIPQTAPAMVKCHLLDSTFSSVELEVAALAEEGVAPAGGSVVKRCRVQCKQ 692          
BLAST of mRNA_P-fluviatile_contig1.540.1 vs. uniprot
Match: A0A6H5JKK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKK0_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 2.450e-120
Identity = 284/593 (47.89%), Postives = 342/593 (57.67%), Query Frame = 0
Query:  117 DQADFGYWQLRSLALRTEAVVPSPGDESSNVLP-RLLEEYNWDDEQSESWEDDDMWLG-TADAAEISNAKAEMDGLRSEATTDASQLQRI--ADLQVEAFVPSEDQNSSRVPAAPLLEQAYPQ----VPLIQVDLDDEPST---RXXXXXXXXQLRQHASPTVFDSGLAVVDQMASSVTDTGGENSSLIHSQHAPTPAAAITQTPGAPSCSSALSLDLDVRAELSPLLGV-LSPSSEKDESSELPS-QAEDLS-MHVAPAKGRFNAAAATGAETPAG--------VD-APVAISG------------------DAGEAAAAAITANAEGNTDVSQAAAAGTTVAVSAAVSEDLAYVHQGSVLKSFAITGSVLVAASHGARARLRITDKHGHIANATAISVVAAENTAGSISPTREYVCKAGPVQQAGAPPKFLRAVAYRCSPAVKILPVRVTCRLNSAGNSLLVWAQVIANPQLPQPLCGVSVLVSLPFSPRNEGHVQSEPPATLKPDRKMLEWVLPMKMKPGGKQVMQARLIIDEGQMAGAAIQQTAPAMVKCHLLDSTFSSVELEIAAMAEERGQVDAGRVMKRCRVQCTQ 668
            D +DFG+WQLR LALR EA +   GD++S  +P RL E  NWDDE+SESWED+ MW   T D   ++   A  D  +  +    S+  R     + +     S+ ++++ +      E A       V L ++  D  P     R        Q  Q  S   F  G  VV +  S V   G     LI    AP  A A+ Q   A   +  L     + A  SPL     SPS+  DE S L    A DLS +  +  +GRFNA       T  G        VD AP  + G                  D+  AAA    A  +     S A        VSAAVSEDLAYVH+G  L+S+ ITGSVLVAAS GARA++R+TDK GHIA ATA   VA E  A ++ PTREY+CK G VQ  GAPP+FL A+ YRCSPAVK+LPVRVTCRL +AGN +LVW QVIANPQLPQPL GVSVLV+LPFSPR+EG V+SEPPATLK DRKMLEWVLP  M+ GGKQV+QARL  DEGQ+  AAI QTAPAMVKCHLLDSTFSSVELE+AA+A+E      G V+KRCRVQC Q
Sbjct:   32 DASDFGFWQLRHLALRVEASLSPAGDDASYAMPPRLFEGRNWDDEESESWEDEYMWSDETVDNDGLTGVTAVPDDAKDMSPVPVSEPLRSDGVSMALSPLTVSQPEDANTLTGVTRTEHATGHADEGVSLNKMFFDGLPPKAPHRPTKPMMTDQRTQQPSGPGF--GSPVVGRRPSPVGYRGSPL--LIPPDQAP--ALAMAQPANANVDADKLLPPSAMGAGFSPLRSDGESPSATPDEVSGLQGGSAVDLSTLTTSSMEGRFNAVVGDEPSTVVGPTTVVKETVDGAPTGVPGGETGIQPAAEPHAISPQVDSLPAAATGTKAGLQDRVGDSGAETEPDNAMVSAAVSEDLAYVHRGPELQSYGITGSVLVAASCGARAQVRVTDKQGHIATATANPNVAEEKPAIAVPPTREYLCKPGAVQHGGAPPRFLPALMYRCSPAVKVLPVRVTCRLRTAGNRVLVWVQVIANPQLPQPLSGVSVLVNLPFSPRDEGDVKSEPPATLKTDRKMLEWVLPSGMQQGGKQVLQARLSADEGQVRVAAIPQTAPAMVKCHLLDSTFSSVELEVAALAKEGVAPAVGSVVKRCRVQCKQ 618          
BLAST of mRNA_P-fluviatile_contig1.540.1 vs. uniprot
Match: B5YM56_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM56_THAPS)

HSP 1 Score: 60.5 bits (145), Expect = 1.110e-5
Identity = 44/166 (26.51%), Postives = 81/166 (48.80%), Query Frame = 0
Query:  506 KFLRAVAYRCSPAVKILPVRVTCRLNSAGNSLLVWAQVIANPQLPQPLCGVSVLVSLPFSPRNEGHVQSEPPATLKPDRKMLEWVLPMKMKPGGKQVMQARLIID-------EGQMAGAAIQQTAPAMVKCHLLDSTFSSVELEIAAMAEERGQVDAGRVMKRCRV 664
            ++   V Y+CS +++ +P+RV  R+ + G S  V  Q+ +NPQ P  L  +++++ +P   R E  +Q  PP  +  + K +      ++  G K  +QA   ID       EG M   A +   P + +C    +  S+V LE++ + +      +  V++R RV
Sbjct: 1099 QYFPVVRYKCSSSLRPVPIRVQNRVRTQGKSCRVALQISSNPQNPNELVQLTIIMGVPSGVRGES-LQCNPPGGVWNEAKSVVLWCVSELGGGEKFQLQAIFDIDDELLNSSEGDMTDLAEKLEFPVLARCQCSSAQLSNVMLEVSDVPDLFPAEVSKSVIRRFRV 1263          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FGR2_ECTSI1.380e-16849.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKK0_9PHAE2.450e-12047.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B5YM56_THAPS1.110e-526.51Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 415..670
score: 9.156
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 512..664

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5838426..5841939 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.540.1mRNA_P-fluviatile_contig1.540.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 5838426..5842172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.540.1 ID=prot_P-fluviatile_contig1.540.1|Name=mRNA_P-fluviatile_contig1.540.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=671bp
MQPDDIHFAVVWPTAHDGPARKARQCPLSCPEDCSVIVPFQCSLAEASTT
VGCFAASHRKLPCGVGEIETSVLGSFCMFSSPTSVPPALIVVGTKSWSCA
SSVFAFIRCVQADLARDQADFGYWQLRSLALRTEAVVPSPGDESSNVLPR
LLEEYNWDDEQSESWEDDDMWLGTADAAEISNAKAEMDGLRSEATTDASQ
LQRIADLQVEAFVPSEDQNSSRVPAAPLLEQAYPQVPLIQVDLDDEPSTR
RQQQQKQQQLRQHASPTVFDSGLAVVDQMASSVTDTGGENSSLIHSQHAP
TPAAAITQTPGAPSCSSALSLDLDVRAELSPLLGVLSPSSEKDESSELPS
QAEDLSMHVAPAKGRFNAAAATGAETPAGVDAPVAISGDAGEAAAAAITA
NAEGNTDVSQAAAAGTTVAVSAAVSEDLAYVHQGSVLKSFAITGSVLVAA
SHGARARLRITDKHGHIANATAISVVAAENTAGSISPTREYVCKAGPVQQ
AGAPPKFLRAVAYRCSPAVKILPVRVTCRLNSAGNSLLVWAQVIANPQLP
QPLCGVSVLVSLPFSPRNEGHVQSEPPATLKPDRKMLEWVLPMKMKPGGK
QVMQARLIIDEGQMAGAAIQQTAPAMVKCHLLDSTFSSVELEIAAMAEER
GQVDAGRVMKRCRVQCTQQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028565MHD
IPR036168AP2_Mu_C_sf