prot_P-fluviatile_contig1.499.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.499.1
Unique Nameprot_P-fluviatile_contig1.499.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length290
Homology
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: A0A6H5K1Z6_9PHAE (RRF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Z6_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 1.290e-119
Identity = 206/294 (70.07%), Postives = 231/294 (78.57%), Query Frame = 0
Query:    7 CRHIARVCKISSASSPRKWSSK-GSVARLHHIAAAS------HQQQHASPLPPLPHSHLP----PACSPWAGQRRLKHGAKKAGKXXXXXXXXXXXXXADGDDDGGAETLDDIAGISEAKARFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVKKKKDSFPEDDVHKRMKEIDECTKDAETKVASMLEKKKAEILTV 289
            CRH+ARV K ++ S+PRKW     S A LH  AAA+      H +    P    P  H        C+   GQ RLKHG KK   XXXXXXX      ADG+D   AE+LDDIAGI E+KARFD+V++GL  +FQGLRGGKTDPG+LDNVKVESYGSMT LAS+AQASMKGPQLIIL+VYDP MTKA+EDAVRECGMGLNP+SEGQGQV+VPIPKPTKESREAVAKVAAKHAEKSKVV+RGIRHKI DQ+KKKKDSFPEDDVH R+KEID+CTKDAE  +ASMLEKKKAEILTV
Sbjct:    8 CRHLARVRKTATLSAPRKWIPMVESAASLHQHAAAAAGVMANHPKHRHPPFSRPPQRHQQGRQQDGCASLIGQIRLKHGGKKGNXXXXXXXXSAPSSTADGEDV--AESLDDIAGIPESKARFDKVLQGLTRNFQGLRGGKTDPGMLDNVKVESYGSMTNLASVAQASMKGPQLIILSVYDPGMTKAIEDAVRECGMGLNPYSEGQGQVHVPIPKPTKESREAVAKVAAKHAEKSKVVVRGIRHKILDQIKKKKDSFPEDDVHMRIKEIDKCTKDAEAGIASMLEKKKAEILTV 299          
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: A0A836CM55_9STRA (Ribosome recycling factor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM55_9STRA)

HSP 1 Score: 169 bits (427), Expect = 9.510e-47
Identity = 97/195 (49.74%), Postives = 126/195 (64.62%), Query Frame = 0
Query:  104 TLDDIAGISEAKARFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQG----------QVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVKKKKDSFPEDDVHKRMKEIDECTKDAETKVASMLEKKKAEILT 288
            T+DD A +    AR DRV+EGLK D   LRGG+ DP + D++ V SYG    L+S+AQ S KGPQL++LT YDPA   AV  AVR+ GM LNP  +G             V VPIPK + E+RE++ KVA K  EK+KV +RGIRHK+ +++KK K +F EDDVH+R KEID      E K A+ L+ KK +IL+
Sbjct:  140 TVDDCAPLDALSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILS 334          
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: R6HZC7_9PROT (Ribosome-recycling factor n=3 Tax=Azospirillum TaxID=191 RepID=R6HZC7_9PROT)

HSP 1 Score: 128 bits (321), Expect = 1.020e-32
Identity = 74/180 (41.11%), Postives = 117/180 (65.00%), Query Frame = 0
Query:  112 SEAKARFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVKK-KKDSFPEDDVHKRMK-EIDECTKDAETKVASMLEKKKAEILTV 289
            S++K+R D+ IE L+ DF  LR G+    LLD + VE+YGSMT L+ +   S+  P+ + ++++D ++ KAV+ A+RE  +GLNP S+GQ  + +PIP  ++E R+ + K+A K+AE++KV +R IR    D VKK KKD+   +D  KR + EI + T ++  K+  ML  K+ +IL V
Sbjct:    9 SDSKSRMDKTIETLRGDFGSLRAGRAHVSLLDGIMVEAYGSMTPLSQVGTVSVPDPRTLSISIWDRSLAKAVDKALRESDLGLNPASDGQ-LIRIPIPPLSEERRKELVKIAGKYAEQNKVAIRNIRRDALDDVKKLKKDNQISEDEEKRFENEIQKLTDESIKKIEEMLSAKEKDILQV 187          
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: A0A840XNP9_9PROT (Ribosome-recycling factor n=12 Tax=Roseomonas TaxID=125216 RepID=A0A840XNP9_9PROT)

HSP 1 Score: 127 bits (319), Expect = 2.080e-32
Identity = 75/175 (42.86%), Postives = 110/175 (62.86%), Query Frame = 0
Query:  117 RFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVKK--KKDSFPEDDVHKRMKEIDECTKDAETKVASMLEKKKAEILTV 289
            R D  +E LK +F GLR G+  P LL+ ++VE+YGSMT L  +A  S+ GP L+ + V+D A+TK VE A+RE  +GLNP +EGQ  + VP+P  T E R  +AK AA++AE+++V +RG+R    +QVK   KK    ED+  +   EI + T     +V + L +K+ +I TV
Sbjct:   15 RMDGAMETLKKEFAGLRTGRASPALLEPIRVEAYGSMTPLNQVANISVAGPGLLSVQVWDKALTKHVESAIREANLGLNPQAEGQ-VIRVPLPPLTTERRNELAKAAARYAEQTRVAIRGVRRDGMEQVKAWVKKHETSEDEAKRAEDEIQKLTDQYVKQVDAALAEKEKDIRTV 188          
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: UPI001BA79AAC (ribosome recycling factor n=1 Tax=Roseomonas terrae TaxID=424799 RepID=UPI001BA79AAC)

HSP 1 Score: 127 bits (318), Expect = 2.920e-32
Identity = 76/175 (43.43%), Postives = 108/175 (61.71%), Query Frame = 0
Query:  117 RFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVKK--KKDSFPEDDVHKRMKEIDECTKDAETKVASMLEKKKAEILTV 289
            R D  IE LK +FQGLR G+  P LL+ V+VE+YGS+T L  +A  S+ GP L+ + V+D  +TKAVE A+RE  +GLNP +EGQ  + VP+P  T E R  + K AA++AE ++V +RG+R    +Q K   KK    ED+V +   EI + T     +V + L  K+ +I TV
Sbjct:   15 RMDGAIETLKKEFQGLRTGRASPALLEPVRVEAYGSVTPLNQVANVSIAGPGLLSVQVWDKGLTKAVESAIREANLGLNPQAEGQ-VIRVPLPPLTAERRNELVKAAARYAESTRVAIRGVRRDGMEQAKGWIKKHEASEDEVKQAETEIQKLTDQYVKQVDASLVDKEKDIRTV 188          
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: A0A4R0Y5H3_9PROT (Ribosome-recycling factor n=4 Tax=Acetobacteraceae TaxID=433 RepID=A0A4R0Y5H3_9PROT)

HSP 1 Score: 127 bits (318), Expect = 3.090e-32
Identity = 73/175 (41.71%), Postives = 111/175 (63.43%), Query Frame = 0
Query:  117 RFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVK--KKKDSFPEDDVHKRMKEIDECTKDAETKVASMLEKKKAEILTV 289
            R D  +E LK +F GLR G+  P LL+ ++VE+YGS   LA +A  S+ GP ++ + V+D ++TKAVE A+R+ G+GLNP SEGQ  + V +P  T++ R  +AK AAK++E +KV +RG+R    +Q++  KKK    EDD  +   E+ + T D   K+   L +K+ +I TV
Sbjct:   17 RMDGALETLKKEFAGLRTGRASPSLLEPIRVEAYGSNQPLAQVANVSVAGPSMLQVQVWDRSVTKAVEIAIRDSGLGLNPQSEGQ-TIRVMLPPLTEQRRNELAKTAAKYSEGAKVAIRGVRRDGMEQIQGWKKKSEIGEDDAKRWSDEVQKLTDDYVKKIDVSLAEKEKDIKTV 190          
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: A0A8J6JSD3_9PROT (Ribosome-recycling factor n=1 Tax=Rubritepida sp. TaxID=2497596 RepID=A0A8J6JSD3_9PROT)

HSP 1 Score: 126 bits (317), Expect = 4.340e-32
Identity = 72/179 (40.22%), Postives = 112/179 (62.57%), Query Frame = 0
Query:  113 EAKARFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVK--KKKDSFPEDDVHKRMKEIDECTKDAETKVASMLEKKKAEILTV 289
            + K R D  +E LK +FQGLR G+  P LL+ ++VE YG+++ L  +A  S+ GP ++ + V+D   TKAVE A+R+ G+GLNP +EGQ  + VP+P  T E R  ++K A+K+AE +K+ +RG+R    +QV+  KKK    EDD  +  KE+   T +   K+ ++  +K  +I TV
Sbjct:   13 DMKRRMDSTMETLKKEFQGLRTGRASPNLLEPIRVEIYGAVSPLNQVANVSVGGPGMLHVQVFDRTQTKAVEIAIRDSGLGLNPQAEGQ-TIRVPLPPLTAERRNDLSKQASKYAEGAKIAVRGVRRDGMEQVQAWKKKSDISEDDAKRAEKEMQTLTDEYVKKIDTVFAEKDKDIRTV 190          
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: A0A6V1LRG3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LRG3_HETAK)

HSP 1 Score: 127 bits (319), Expect = 1.990e-31
Identity = 69/180 (38.33%), Postives = 114/180 (63.33%), Query Frame = 0
Query:  109 AGISEAKARFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVKKKKDSFPEDDVHKRMKEIDECTKDAETK-VASMLEKKKAEIL 287
            A + +   +  R I+ L  D + LR G+ DP + D+++V++YG    L+++A  + +GPQL+++ VYDP +  AV+ A+RECGMGLNP +   G ++VP+PK +KE RE +A++A +  EK+K  +R  R    D+ KK     PED+  + +KEID    DA+ K V+ +++ K+ E+L
Sbjct:   95 ADLEQVDQKMGRYIQALDKDLRTLRAGRADPAMFDHLQVDAYGQSAPLSAVADVAPRGPQLLVVNVYDPQLKGAVDTAIRECGMGLNPQALEGGALSVPVPKTSKEKREKLARMAKQQGEKTKQNVRNARRSAIDETKKA--GLPEDESKRLVKEIDALC-DAKLKAVSDLIDGKQKELL 271          
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: UPI001A067563 (Ribosome recycling factor n=1 Tax=Acetobacteraceae bacterium H6797 TaxID=2571211 RepID=UPI001A067563)

HSP 1 Score: 123 bits (309), Expect = 6.290e-31
Identity = 74/186 (39.78%), Postives = 113/186 (60.75%), Query Frame = 0
Query:  107 DIAGI-SEAKARFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVK--KKKDSFPEDDVHKRMKEIDECTKDAETKVASMLEKKKAEILTV 289
            DIA + S+   R D  +E LK +F GLR G+  P LL+ ++VE+YGS   L+ +A  S+ GP ++ + V+D ++TKAVE A+R+ G+GLNP +EG   + VP+P  T E R  +AK AAK+AE +KV  RG+R    + +K  +KK    +DD  K   E+ + T      + + L +K+ +I TV
Sbjct:    4 DIAALKSDLSRRMDGALETLKKEFSGLRTGRASPALLEPIRVEAYGSNQPLSQVANVSVSGPSMLSVQVWDKSVTKAVEVAIRDSGLGLNPQAEGT-VIRVPLPPLTTERRNELAKTAAKYAEAAKVAARGVRRDGMETIKGWEKKSEVGKDDAAKWSDEVQKLTDATIKAIDAALAEKEKDIKTV 188          
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Match: A0A1Q6T2D3_9PROT (Ribosome-recycling factor n=2 Tax=Acetobacter TaxID=434 RepID=A0A1Q6T2D3_9PROT)

HSP 1 Score: 123 bits (308), Expect = 8.600e-31
Identity = 71/180 (39.44%), Postives = 116/180 (64.44%), Query Frame = 0
Query:  112 SEAKARFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESYGSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEGQGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVKK-KKDSFPEDDVHKRM-KEIDECTKDAETKVASMLEKKKAEILTV 289
            ++   R ++ +E L++DF GLR G+    LLDN+ VE+YG+ T +A +   S+   + + ++V+D  + KAVE A+RE  +GLNP S+GQ  + +PIP  ++E R+ + KVA K+AE++K+ +R IR    D+V+K KKD+   +D  KR   EI + T D+  K+  ML++K+ +IL V
Sbjct:    9 TDTTERMEKTLETLRNDFGGLRAGRAHASLLDNIMVEAYGTPTPIAQVGTVSVPDARTLSVSVWDKGIAKAVEKALRESDLGLNPVSDGQ-LIRIPIPPLSEERRKELVKVAGKYAEQNKIAIRNIRRDALDEVRKLKKDNLISEDDEKRYGTEIQKLTDDSIKKIDDMLDQKEKDILQV 187          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1Z6_9PHAE1.290e-11970.07RRF domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CM55_9STRA9.510e-4749.74Ribosome recycling factor domain-containing protei... [more]
R6HZC7_9PROT1.020e-3241.11Ribosome-recycling factor n=3 Tax=Azospirillum Tax... [more]
A0A840XNP9_9PROT2.080e-3242.86Ribosome-recycling factor n=12 Tax=Roseomonas TaxI... [more]
UPI001BA79AAC2.920e-3243.43ribosome recycling factor n=1 Tax=Roseomonas terra... [more]
A0A4R0Y5H3_9PROT3.090e-3241.71Ribosome-recycling factor n=4 Tax=Acetobacteraceae... [more]
A0A8J6JSD3_9PROT4.340e-3240.22Ribosome-recycling factor n=1 Tax=Rubritepida sp. ... [more]
A0A6V1LRG3_HETAK1.990e-3138.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001A0675636.290e-3139.78Ribosome recycling factor n=1 Tax=Acetobacteraceae... [more]
A0A1Q6T2D3_9PROT8.600e-3139.44Ribosome-recycling factor n=2 Tax=Acetobacter TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1360.40coord: 136..211
e-value: 2.0E-51
score: 175.8
NoneNo IPR availableGENE3D1.10.132.20coord: 116..286
e-value: 2.0E-51
score: 175.8
NoneNo IPR availablePANTHERPTHR20982:SF3MITOCHONDRIAL RIBOSOME RECYCLING FACTORcoord: 58..288
IPR023584Ribosome recycling factor domainPFAMPF01765RRFcoord: 125..287
e-value: 1.3E-47
score: 161.7
IPR002661Ribosome recycling factorPANTHERPTHR20982RIBOSOME RECYCLING FACTORcoord: 58..288
IPR036191RRF superfamilySUPERFAMILY55194Ribosome recycling factor, RRFcoord: 112..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5515637..5520037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.499.1mRNA_P-fluviatile_contig1.499.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 5515637..5521175 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.499.1 ID=prot_P-fluviatile_contig1.499.1|Name=mRNA_P-fluviatile_contig1.499.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=290bp
MAARSPCRHIARVCKISSASSPRKWSSKGSVARLHHIAAASHQQQHASPL
PPLPHSHLPPACSPWAGQRRLKHGAKKAGKKGGKGGKGAASAAADGDDDG
GAETLDDIAGISEAKARFDRVIEGLKHDFQGLRGGKTDPGLLDNVKVESY
GSMTTLASLAQASMKGPQLIILTVYDPAMTKAVEDAVRECGMGLNPHSEG
QGQVNVPIPKPTKESREAVAKVAAKHAEKSKVVLRGIRHKIQDQVKKKKD
SFPEDDVHKRMKEIDECTKDAETKVASMLEKKKAEILTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023584Ribosome_recyc_fac_dom
IPR002661Ribosome_recyc_fac
IPR036191RRF_sf