prot_P-fluviatile_contig1.483.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.483.1
Unique Nameprot_P-fluviatile_contig1.483.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length60
Homology
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BLAST of mRNA_P-fluviatile_contig1.483.1 vs. uniprot
Match: D8LNH2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNH2_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.150e-21
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 0 
Query:    1 MIGVQGRFVTIPGALGVQENQVSLLHLMIAATVVLFGGWKAAAVMVFAYVITNQKGRAR 59
            MIGVQGR VTIPGALGVQE QV  ++LMIAA VVLFGGWK AA++VFAYV+ NQK R R
Sbjct:   82 MIGVQGRTVTIPGALGVQEQQVPFVYLMIAALVVLFGGWKVAALIVFAYVLINQKPRGR 140
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNH2_ECTSI2.150e-2176.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..59
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5326230..5328065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.483.1mRNA_P-fluviatile_contig1.483.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 5325722..5329270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.483.1 ID=prot_P-fluviatile_contig1.483.1|Name=mRNA_P-fluviatile_contig1.483.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=60bp
MIGVQGRFVTIPGALGVQENQVSLLHLMIAATVVLFGGWKAAAVMVFAYV
ITNQKGRAR*
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