prot_P-fluviatile_contig1.398.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.398.1
Unique Nameprot_P-fluviatile_contig1.398.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length278
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 183..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..182
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..91
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..65
NoneNo IPR availableTMHMMTMhelixcoord: 162..184
NoneNo IPR availableTMHMMTMhelixcoord: 50..69
NoneNo IPR availableTMHMMTMhelixcoord: 79..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4584735..4585568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.398.1mRNA_P-fluviatile_contig1.398.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 4584735..4585648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.398.1 ID=prot_P-fluviatile_contig1.398.1|Name=mRNA_P-fluviatile_contig1.398.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=278bp
PGPLALFILSHPGVVPVPSHATAASDALSVAARRSGWAVRAAGRGETRAH
VFVVVHASLLLLLLYHFGLEHVHVVAVVVVALDGLIPGTAAALGATAGAA
IATTAGFRLRAFLLGTRGGRGRRRRCRHGGVSIMFDLHGGQRAFLLFSPI
HPLRRRRRRRRLLHAGPVCCCMSLCAISSFLVEPSYPLLDIRRATPCFFR
TTGPALRQQASTAGRSRRPFRRHIALSAATATTAATARAVDRHFPPPSLP
LPVTPDGAVGCTCTLPGPFLPRALLAG*
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