prot_P-fluviatile_contig1.396.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig1.396.1
Unique Name	prot_P-fluviatile_contig1.396.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	271

Homology

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BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 1.040e-70
Identity = 153/268 (57.09%), Postives = 167/268 (62.31%), Query Frame = 0

Query:   14 ESGLVDVFTVSVRRMWENCWSYNHEGTKAWLAAERLSCVFERLLLEWVLRTCPAPPLLSQLLETEVRPCSACGIGYDPAASASAAVAADAPGNGSEVSASRTGNASPPFQAAATAAA-PPVGDA--PATVVCDFCDATYHLDCLRPPLVQVPRAEWFCPACVCPLGARGRG------GAGMALARRPPAEGFGCGSRWSEPAEVGEEAVGAGSSPAMALANEEGCTVAGWAAGKGVEGPCAERSTGRT-REPPLLCGSGHGGSLETGG 271
            E+GLVD FT+SVRRMWENCWSYNHEGTKAW+AA RLS VFERLL EW+LR  PAPP L QLL  E RPCSACG   DP  S       D    GS  + + +GNASPP  AAA+ AA    G+A  PATVVCDFCDATYHL CLRPPL QVPR EWFCPACVCP G  G G        G  L RRPP  GFGC SRWS  +  G ++   G + A ALAN  G   A                T     EPPLLCGSG GGS+E  G
Sbjct: 1398 EAGLVDEFTISVRRMWENCWSYNHEGTKAWVAAVRLSSVFERLLREWILRATPAPPGLPQLLGGETRPCSACGAVDDP--STPDVRLGD---TGSSGAPATSGNASPPAAAAASVAALSATGEAAAPATVVCDFCDATYHLGCLRPPLAQVPRGEWFCPACVCP-GTAGGGXXGWGQATGATLVRRPPEGGFGCRSRWSGTSAGGNKS---GEAAARALANGAGGRAADXXXXXXXXXXXXXVGTAAAGMEPPLLCGSGSGGSIEKDG 1656

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BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 8.910e-70
Identity = 152/275 (55.27%), Postives = 166/275 (60.36%), Query Frame = 0

Query:   14 ESGLVDVFTVSVRRMWENCWSYNHEGTKAWLAAERLSCVFERLLLEWVLRTCPAPPLLSQLLETEVRPCSACGIGYDPAASASAAVAA--DAPGNGSEVSASRT--GNASPPFQA--------AATAAAPPVGDAPATVVCDFCDATYHLDCLRPPLVQVPRAEWFCPACVCP-LGARGRGGAGMA----LARRPPAEGFGCGSRWSEPAEVGEEAVGAGSSPAMALANEEGCTVAGWAAGKGVEGPCAERSTGRTREPPLLCGSGHGGSLETGG 271
            E+GLVD FT+SVRRMWENCWSYNHEGTKAWLAA RLS VFERLL EW+LR  PAPP L QLL +E RPCSACG   DP+ +A AA AA  D P   + +S + T  GNASPP            AT  A     APATVVCDFCDATYHL CL PPL QVPR EWFCPACVCP   A G GG G A    L RRPP  GFGC SRWS  +  G ++  A +                        G     + G   EPPLLCGSG GGSLE  G
Sbjct:  994 EAGLVDEFTISVRRMWENCWSYNHEGTKAWLAAVRLSSVFERLLREWILRATPAPPGLPQLLGSEARPCSACGAVEDPSTAAEAAAAATPDVPLGDTGISGAPTTSGNASPPXXXXXXXXXXLVATGEAA----APATVVCDFCDATYHLGCLHPPLAQVPRGEWFCPACVCPGTAAAGGGGWGQATGATLVRRPPEGGFGCRSRWSGTSAGGNKSGAAAARALXXXXXXXXXXXXXXXXXXXXXGAVGTAAAGV--EPPLLCGSGSGGSLEKDG 1262

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BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: A0A7L3E537_9PASS (PHRF1 protein (Fragment) n=1 Tax=Chaetops frenatus TaxID=221966 RepID=A0A7L3E537_9PASS)

HSP 1 Score: 62.4 bits (150), Expect = 2.770e-7
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0

Query:  140 VVCDFCDATYHLDCLRPPLVQVPRAEWFCPACVCPLGARG 179
            ++CD CDA YH++CL PPL +VP  EWFCPAC  P+GA G
Sbjct:  202 LLCDGCDAGYHMECLNPPLTEVPVDEWFCPACA-PMGANG 240

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BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: UPI00188E0B55 (PHD and RING finger domain-containing protein 1 isoform X1 n=3 Tax=Talpa occidentalis TaxID=50954 RepID=UPI00188E0B55)

HSP 1 Score: 62.0 bits (149), Expect = 3.710e-7
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0

Query:  140 VVCDFCDATYHLDCLRPPLVQVPRAEWFCPACVCPLGA 177
            ++CD CDA YH++CLRPPL +VP  EWFCP C  P GA
Sbjct:  298 LLCDGCDAGYHMECLRPPLQEVPVDEWFCPECAAPEGA 335

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BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: A0A851P5G7_9GALL (PHRF1 protein (Fragment) n=1 Tax=Penelope pileata TaxID=1118817 RepID=A0A851P5G7_9GALL)

HSP 1 Score: 62.0 bits (149), Expect = 3.720e-7
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0

Query:  140 VVCDFCDATYHLDCLRPPLVQVPRAEWFCPACVCPLGA 177
            ++CD CDA YH++CL PPL +VP  EWFCPACV PLGA
Sbjct:  210 LLCDGCDAGYHMECLNPPLSEVPVDEWFCPACV-PLGA 246

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BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: A9TBW6_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TBW6_PHYPA)

HSP 1 Score: 62.0 bits (149), Expect = 3.860e-7
Identity = 48/158 (30.38%), Postives = 74/158 (46.84%), Query Frame = 0

Query:   16 GLVDVFTVSVRRMWENCWSYNHEGTKAWLAAERLSCVFERLLLEWVLRTCPAPPLLSQLLETEVRPCSACGIGYDPAASASAAVAADAPGNGSEVSASRTGNASPPFQAAATAAAPPVG-DAPATVVCDFCDATYHLDCLRPPLVQVPRAEWFCPACV 172
            G  D F   +R++W+N  S +  G+     A  LS +FE+L L+ V+      P      E      S      D +  +++       GN ++    + G A  P++   T     V  D  + ++CD CDA YH+ CL PPL +VP+  WFCP+CV
Sbjct: 1837 GSTDAFAADMRQIWKNVESVHKSGSAILELANTLSQLFEKLYLKQVVSLIKGMPDTKDDKEKV----SDVDTKVDGSVRSNSKAGTKGSGNAAD---DKLGKA--PWEDDTTCRVCGVDEDYDSILLCDGCDAEYHIYCLVPPLEKVPKGNWFCPSCV 1985

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BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: A0A7I4C0B1_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4C0B1_PHYPA)

HSP 1 Score: 62.0 bits (149), Expect = 3.950e-7
Identity = 48/158 (30.38%), Postives = 74/158 (46.84%), Query Frame = 0

Query:   16 GLVDVFTVSVRRMWENCWSYNHEGTKAWLAAERLSCVFERLLLEWVLRTCPAPPLLSQLLETEVRPCSACGIGYDPAASASAAVAADAPGNGSEVSASRTGNASPPFQAAATAAAPPVG-DAPATVVCDFCDATYHLDCLRPPLVQVPRAEWFCPACV 172
            G  D F   +R++W+N  S +  G+     A  LS +FE+L L+ V+      P      E      S      D +  +++       GN ++    + G A  P++   T     V  D  + ++CD CDA YH+ CL PPL +VP+  WFCP+CV
Sbjct: 1763 GSTDAFAADMRQIWKNVESVHKSGSAILELANTLSQLFEKLYLKQVVSLIKGMPDTKDDKEKV----SDVDTKVDGSVRSNSKAGTKGSGNAAD---DKLGKA--PWEDDTTCRVCGVDEDYDSILLCDGCDAEYHIYCLVPPLEKVPKGNWFCPSCV 1911

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BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: A0A7K7X6G2_9PASS (PHRF1 protein (Fragment) n=1 Tax=Mohoua ochrocephala TaxID=874463 RepID=A0A7K7X6G2_9PASS)

HSP 1 Score: 61.6 bits (148), Expect = 4.980e-7
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0

Query:  140 VVCDFCDATYHLDCLRPPLVQVPRAEWFCPACVCPLGARG 179
            ++CD CDA YH++CL PPL +VP  EWFCPAC  P+GA G
Sbjct:  180 LLCDGCDAGYHMECLNPPLSEVPVDEWFCPACA-PMGANG 218

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BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: A0A7K5QKT6_9PASE (PHRF1 protein (Fragment) n=1 Tax=Prunella himalayana TaxID=670356 RepID=A0A7K5QKT6_9PASE)

HSP 1 Score: 61.6 bits (148), Expect = 4.980e-7
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0

Query:  140 VVCDFCDATYHLDCLRPPLVQVPRAEWFCPACVCPLGARG 179
            ++CD CDA YH++CL PPL +VP  EWFCPAC  P+GA G
Sbjct:  180 LLCDGCDAGYHMECLNPPLSEVPVDEWFCPACA-PMGANG 218

[Close]

BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Match: A0A7L3QB98_9SYLV (PHRF1 protein (Fragment) n=1 Tax=Cettia cetti TaxID=68486 RepID=A0A7L3QB98_9SYLV)

HSP 1 Score: 61.6 bits (148), Expect = 4.980e-7
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0

Query:  140 VVCDFCDATYHLDCLRPPLVQVPRAEWFCPACVCPLGARG 179
            ++CD CDA YH++CL PPL +VP  EWFCPAC  P+GA G
Sbjct:  180 LLCDGCDAGYHMECLNPPLSEVPVDEWFCPACA-PMGANG 218

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig1.396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KQ21_9PHAE	1.040e-70	57.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LI13_ECTSI	8.910e-70	55.27	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7L3E537_9PASS	2.770e-7	62.50	PHRF1 protein (Fragment) n=1 Tax=Chaetops frenatus...	[more]
UPI00188E0B55	3.710e-7	63.16	PHD and RING finger domain-containing protein 1 is...	[more]
A0A851P5G7_9GALL	3.720e-7	68.42	PHRF1 protein (Fragment) n=1 Tax=Penelope pileata ...	[more]
A9TBW6_PHYPA	3.860e-7	30.38	Predicted protein n=1 Tax=Physcomitrium patens Tax...	[more]
A0A7I4C0B1_PHYPA	3.950e-7	30.38	Uncharacterized protein n=4 Tax=Physcomitrium pate...	[more]
A0A7K7X6G2_9PASS	4.980e-7	62.50	PHRF1 protein (Fragment) n=1 Tax=Mohoua ochrocepha...	[more]
A0A7K5QKT6_9PASE	4.980e-7	62.50	PHRF1 protein (Fragment) n=1 Tax=Prunella himalaya...	[more]
A0A7L3QB98_9SYLV	4.980e-7	62.50	PHRF1 protein (Fragment) n=1 Tax=Cettia cetti TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 81..172 e-value: 5.6E-8 score: 42.5
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 126..175 e-value: 9.2E-13 score: 49.7
IPR036427	Bromodomain-like superfamily	GENE3D	1.20.920.10		coord: 16..63 e-value: 3.4E-6 score: 28.6
IPR036427	Bromodomain-like superfamily	SUPERFAMILY	47370	Bromodomain	coord: 21..59
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 139..173 e-value: 2.6E-8 score: 33.6
None	No IPR available	PANTHER	PTHR47162	FAMILY NOT NAMED	coord: 138..173
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 139..176

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig1	contig	P-fluviatile_contig1:4573218..4574454 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig1.396.1	mRNA_P-fluviatile_contig1.396.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig1 4573218..4574454 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig1.396.1 ID=prot_P-fluviatile_contig1.396.1|Name=mRNA_P-fluviatile_contig1.396.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=271bp
GAKAESAAGEIAVESGLVDVFTVSVRRMWENCWSYNHEGTKAWLAAERLS
CVFERLLLEWVLRTCPAPPLLSQLLETEVRPCSACGIGYDPAASASAAVA
ADAPGNGSEVSASRTGNASPPFQAAATAAAPPVGDAPATVVCDFCDATYH
LDCLRPPLVQVPRAEWFCPACVCPLGARGRGGAGMALARRPPAEGFGCGS
RWSEPAEVGEEAVGAGSSPAMALANEEGCTVAGWAAGKGVEGPCAERSTG
RTREPPLLCGSGHGGSLETGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001965	Znf_PHD
IPR013083	Znf_RING/FYVE/PHD
IPR036427	Bromodomain-like_sf
IPR019787	Znf_PHD-finger
IPR011011	Znf_FYVE_PHD