prot_P-fluviatile_contig1.361.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.361.1
Unique Nameprot_P-fluviatile_contig1.361.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1018
Homology
BLAST of mRNA_P-fluviatile_contig1.361.1 vs. uniprot
Match: D7G7C4_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C4_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 4.690e-125
Identity = 399/819 (48.72%), Postives = 447/819 (54.58%), Query Frame = 0
Query:  218 DLKLLPSGTSRSLRLKKQAQVTPSPSEFRARERQDLADQPFCSVCAAPFTLMMRRQRCAVCGESVCAQCSSDKRHVEGQKGLQRVCDICIVEGPVVLDEHGVYSAGPSPADTPIDMRAISTAPVPIAPPRSTSSASAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRSLFADSPQASSAAVESESSSPSARGKSFGQSHAYTAAVNAAXXXXXXXXXXXXXXXXXXXXXXXSGRLTVSTRTPRSSPTPTXXXXXXXRSPVTVTTVVKGSGPHSGTGGA-------RGVGGDXXXXXGGETAKDYFSRAAAAMESDVVKGGAVIAPPPIATSGAKTKPPAVEAASAGAEGAGVLVLGDDCEGETEGGPPSSASHAGKGRKRGKXXXXXXXXXXXXKSSQDRRQHSSSAQSFGDYHGTSIG---TPGTRSSRSTPRG------SNSCTLGFSNHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYTGVGKQRRASLSSRGRAGTDVDDSGAARGGRLERAMWTQSSAFVRDFIRGAGIHRLDPRRLSGDERCALSCALHDCINARLAPSNNYVPTRLYVRCPLRRWTGPLTVVVSSTGVDRAWAGAWALVRKILEALLAFTQERERAAVSGIGGGRTRRXXXXXXXXXXXXXXX-VGAPGSQQH--QGWMPGRRLMAVIILMLLATYRRYQVTHPEVTTVHVFGAASSLFFALGAFLIRAAADLAIDSCGAVIPSLCGTREARLAAAYSHLQASGGGGXXXXXXXXGHLGGVEDXXXXXXXXXQEEGSRVFADAVGRAPGEGHELDQYFIL 1017
            DLKL PSGTSR+LRLKKQAQ TPSPSEF++RERQD+ DQPFC VCAAPFTLMMRRQRCAVC +SVCA CSSDKRHVEGQKGLQRVCDICIVEGPVVLDE+G+Y+A PSP                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +      S A                     TA V AA                       +    +  ++        XX     RSPVTVTTV KGSG HS +GG              XXXXX            A   ES+    GA          G +     VEA    A  AG   LGD+ +GE EGGPPSS S+  KGRKRGKXXXXXXXXX   K+ QDRRQHS S+QSF D          TPGTRSSRSTPR       S++                            XXXXXXXXXXXX   ++  VG QRR++ S  G AGT  DD   A+GG         +SAFV DF+RGAGIHRLDPRR+ G+                                     +  LT+VVS TG+DRAWAGAW L+RK+L+ LL  +QER R   SG G      XXX  XXXXXXXXX  VGA GS Q   + W PGRR+ A   L LLA+YRRYQVTHPEVTT HV GAASSL  AL AFL+RAAADL ID+CGAVIPSLCGTRE+RL AAY  LQ   G G            G E+         +E G R  A+ VG    EGHELDQYFIL
Sbjct:   46 DLKLRPSGTSRTLRLKKQAQFTPSPSEFKSRERQDVVDQPFCGVCAAPFTLMMRRQRCAVCADSVCAPCSSDKRHVEGQKGLQRVCDICIVEGPVVLDENGMYAASPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSRVKPRKSPA---------------------TATVKAA-----------------------ADAAKLRPKSQAXXXXXXXXTFKPPRSPVTVTTVAKGSGGHSMSGGGIRXXXXXXXXXXXXXXXXXXXXXXXXEGEEAVTSESERGHKGAA---------GKQEASVTVEAEMRAA--AGAEALGDEEDGEAEGGPPSSVSNTSKGRKRGKXXXXXXXXXS--KTPQDRRQHSWSSQSFSDXXXXXXXXXXTPGTRSSRSTPRSNGGNDFSHAXXXXXXXXXXNTAPFCSTAVALAGTASKXXXXXXXXXXXXSKGKWESVGGQRRSAGSGVGEAGTS-DDGPQAQGG--------VASAFVMDFVRGAGIHRLDPRRIGGEXXXXXXXXXXX------------XXXXXXXXXXXXXLSDQLTLVVSWTGLDRAWAGAWVLIRKLLQKLLEMSQERGR---SGNGXXXXXXXXXATXXXXXXXXXHYVGAAGSHQQWQRRWRPGRRVAAAASLTLLASYRRYQVTHPEVTTDHVLGAASSLVLALAAFLVRAAADLTIDACGAVIPSLCGTRESRLEAAYRRLQQQRGDG------------GGEEGVGGGGDAGREGGVRPVAEKVGGPAAEGHELDQYFIL 771          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7C4_ECTSI4.690e-12548.72FYVE-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 247..312
e-value: 7.5E-5
score: 31.2
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 252..307
e-value: 2.0E-9
score: 37.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 250..311
e-value: 7.2E-11
score: 43.7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..880
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 881..898
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 904..924
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 925..1017
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 899..903
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 253..311
score: 10.013
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 254..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4271317..4280746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.361.1mRNA_P-fluviatile_contig1.361.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 4271260..4281569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.361.1 ID=prot_P-fluviatile_contig1.361.1|Name=mRNA_P-fluviatile_contig1.361.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1018bp
MRRRKKEKTQQERITIYTDDDAPESAGMGGNAVIRHSKDASNNSGGVVTV
TPPQQRKRSLLGSLGSMRDLVEQVQDSLSKTRQDPTSSSSGGGKSKDKDT
GNAPMSGSSSTHSSTEKPSSSRIASILSGSNSHGGGSSHSGKASSLFGPL
LDMKGGNKDKDKDKDNKDTGGSAPASPASLAPAAAAATTTAAAAGADIRA
LAIIGSNGGPSSKKKMLDLKLLPSGTSRSLRLKKQAQVTPSPSEFRARER
QDLADQPFCSVCAAPFTLMMRRQRCAVCGESVCAQCSSDKRHVEGQKGLQ
RVCDICIVEGPVVLDEHGVYSAGPSPADTPIDMRAISTAPVPIAPPRSTS
SASAEPATASAKAAAATKMSSASTSTKRAAAATAAAVRSLFADSPQASSA
AVESESSSPSARGKSFGQSHAYTAAVNAAAAASPPRKPPVTTGGSSKGGG
GSSGRLTVSTRTPRSSPTPTTTTSRPPRSPVTVTTVVKGSGPHSGTGGAR
GVGGDGDGDGGGETAKDYFSRAAAAMESDVVKGGAVIAPPPIATSGAKTK
PPAVEAASAGAEGAGVLVLGDDCEGETEGGPPSSASHAGKGRKRGKKARR
AAGAAADAKSSQDRRQHSSSAQSFGDYHGTSIGTPGTRSSRSTPRGSNSC
TLGFSNHGGGGAGPAPMLSSGSTATATTAPRVGAGGGSKGKWEYTGVGKQ
RRASLSSRGRAGTDVDDSGAARGGRLERAMWTQSSAFVRDFIRGAGIHRL
DPRRLSGDERCALSCALHDCINARLAPSNNYVPTRLYVRCPLRRWTGPLT
VVVSSTGVDRAWAGAWALVRKILEALLAFTQERERAAVSGIGGGRTRRGS
GGGRSGNGHYYHHVGAPGSQQHQGWMPGRRLMAVIILMLLATYRRYQVTH
PEVTTVHVFGAASSLFFALGAFLIRAAADLAIDSCGAVIPSLCGTREARL
AAAYSHLQASGGGGGGGEGGGRGHLGGVEDGAGDGRGVGQEEGSRVFADA
VGRAPGEGHELDQYFIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD