mRNA_P-fluviatile_contig1.361.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.361.1 vs. uniprot
Match: D7G7C4_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C4_ECTSI) HSP 1 Score: 407 bits (1047), Expect = 2.720e-122 Identity = 399/819 (48.72%), Postives = 447/819 (54.58%), Query Frame = 1
Query: 709 DLKLLPSGTSRSLRLKKQAQVTPSPSEFRARERQDLADQPFCSVCAAPFTLMMRRQRCAVCGESVCAQCSSDKRHVEGQKGLQRVCDICIVEGPVVLDEHGVYSAGPSPADTPIDMRAISTAPVPIAPPRSTSSASAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRSLFADSPQASSAAVESESSSPSARGKSFGQSHAYTAAVNAAXXXXXXXXXXXXXXXXXXXXXXXSGRLTVSTRTPRSSPTPTXXXXXXXRSPVTVTTVVKGSGPHSGTGGA-------RGVGGDXXXXXGGETAKDYFSRAAAAMESDVVKGGAVIAPPPIATSGAKTKPPAVEAASAGAEGAGVLVLGDDCEGETEGGPPSSASHAGKGRKRGKXXXXXXXXXXXXKSSQDRRQHSSSAQSFGDYHGTSIG---TPGTRSSRSTPRG------SNSCTLGFSNHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYTGVGKQRRASLSSRGRAGTDVDDSGAARGGRLERAMWTQSSAFVRDFIRGAGIHRLDPRRLSGDERCALSCALHDCINARLAPSNNYVPTRLYVRCPLRRWTGPLTVVVSSTGVDRAWAGAWALVRKILEALLAFTQERERAAVSGIGGGRTRRXXXXXXXXXXXXXXX-VGAPGSQQH--QGWMPGRRLMAVIILMLLATYRRYQVTHPEVTTVHVFGAASSLFFALGAFLIRAAADLAIDSCGAVIPSLCGTREARLAAAYSHLQASGGGGXXXXXXXXGHLGGVEDXXXXXXXXXQEEGSRVFADAVGRAPGEGHELDQYFIL 3108
DLKL PSGTSR+LRLKKQAQ TPSPSEF++RERQD+ DQPFC VCAAPFTLMMRRQRCAVC +SVCA CSSDKRHVEGQKGLQRVCDICIVEGPVVLDE+G+Y+A PSP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + S A TA V AA + + ++ XX RSPVTVTTV KGSG HS +GG XXXXX A ES+ GA G + VEA A AG LGD+ +GE EGGPPSS S+ KGRKRGKXXXXXXXXX K+ QDRRQHS S+QSF D TPGTRSSRSTPR S++ XXXXXXXXXXXX ++ VG QRR++ S G AGT DD A+GG +SAFV DF+RGAGIHRLDPRR+ G+ + LT+VVS TG+DRAWAGAW L+RK+L+ LL +QER R SG G XXX XXXXXXXXX VGA GS Q + W PGRR+ A L LLA+YRRYQVTHPEVTT HV GAASSL AL AFL+RAAADL ID+CGAVIPSLCGTRE+RL AAY LQ G G G E+ +E G R A+ VG EGHELDQYFIL
Sbjct: 46 DLKLRPSGTSRTLRLKKQAQFTPSPSEFKSRERQDVVDQPFCGVCAAPFTLMMRRQRCAVCADSVCAPCSSDKRHVEGQKGLQRVCDICIVEGPVVLDENGMYAASPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSRVKPRKSPA---------------------TATVKAA-----------------------ADAAKLRPKSQAXXXXXXXXTFKPPRSPVTVTTVAKGSGGHSMSGGGIRXXXXXXXXXXXXXXXXXXXXXXXXEGEEAVTSESERGHKGAA---------GKQEASVTVEAEMRAA--AGAEALGDEEDGEAEGGPPSSVSNTSKGRKRGKXXXXXXXXXS--KTPQDRRQHSWSSQSFSDXXXXXXXXXXTPGTRSSRSTPRSNGGNDFSHAXXXXXXXXXXNTAPFCSTAVALAGTASKXXXXXXXXXXXXSKGKWESVGGQRRSAGSGVGEAGTS-DDGPQAQGG--------VASAFVMDFVRGAGIHRLDPRRIGGEXXXXXXXXXXX------------XXXXXXXXXXXXXLSDQLTLVVSWTGLDRAWAGAWVLIRKLLQKLLEMSQERGR---SGNGXXXXXXXXXATXXXXXXXXXHYVGAAGSHQQWQRRWRPGRRVAAAASLTLLASYRRYQVTHPEVTTDHVLGAASSLVLALAAFLVRAAADLTIDACGAVIPSLCGTRESRLEAAYRRLQQQRGDG------------GGEEGVGGGGDAGREGGVRPVAEKVGGPAAEGHELDQYFIL 771 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.361.1 >prot_P-fluviatile_contig1.361.1 ID=prot_P-fluviatile_contig1.361.1|Name=mRNA_P-fluviatile_contig1.361.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1018bp MRRRKKEKTQQERITIYTDDDAPESAGMGGNAVIRHSKDASNNSGGVVTVback to top mRNA from alignment at P-fluviatile_contig1:4271260..4281569+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.361.1 ID=mRNA_P-fluviatile_contig1.361.1|Name=mRNA_P-fluviatile_contig1.361.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10310bp|location=Sequence derived from alignment at P-fluviatile_contig1:4271260..4281569+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4271260..4281569+ >mRNA_P-fluviatile_contig1.361.1 ID=mRNA_P-fluviatile_contig1.361.1|Name=mRNA_P-fluviatile_contig1.361.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6108bp|location=Sequence derived from alignment at P-fluviatile_contig1:4271260..4281569+ (Porterinema fluviatile SAG_2381)back to top |