prot_P-fluviatile_contig1.288.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.288.1
Unique Nameprot_P-fluviatile_contig1.288.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length332
Homology
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BLAST of mRNA_P-fluviatile_contig1.288.1 vs. uniprot
Match: A0A6H5JP78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP78_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.490e-32
Identity = 103/266 (38.72%), Postives = 138/266 (51.88%), Query Frame = 0 
Query:   21 DDVSTTDHRFRMLIASVEYYTSDTVWGSDLTMLMASQALRITVKILHPMDKKSRDVYDAAGR-QPAHGTGRKGD-KCEDYRHSQVFLPDDAALTYRGVGTGETTRLIEEAAVALTGGMTRASANELADIPEINRDSICRAGCHFAAVLSTDGRNVPFPVFKVAPPLTREL---------------DERL------SKECDE---------ERAAYNRRRGIQPGSDEARAVAAXXXXXXXXRRQARRELSRANRQLALEERMRARQ 254
            DD +T  ++ +MLIASV  ++    WG DLTML+ASQALRITVK++  +D  SR   +A+   +   G+ RK +   ED RHSQ FLP DA  + R VG G+  R + EA V LT   T+ASA EL ++ E+ + + C  GC FAAV   D    PFP+ + APPL +                 D R+      +  CD          E+AA+    G+QPG + A A           RRQAR+  +  NRQL L E   ARQ
Sbjct:   47 DDAATVANKSKMLIASVADFSKPACWGGDLTMLLASQALRITVKLVCSIDMMSRKRDEASATLETDRGSTRKDNINPEDNRHSQTFLPGDAVSSLR-VGGGD--RTVTEATVILTSSCTQASAGELDNLVEVTKATTCCTGCQFAAVSKKDRSTPPFPLVRAAPPLFQAWYQVPRRACCWVCARDDARMQLIFFAADPCDPPIPGAGREAEQAAHKASLGVQPGWEAAAAATRAAEEAAIARRQARKIKAVENRQLELAELANARQ 309
[Close]
BLAST of mRNA_P-fluviatile_contig1.288.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.790e-28
Identity = 75/160 (46.88%), Postives = 93/160 (58.13%), Query Frame = 0 
Query:   31 RMLIASVEYYTSDTVWGSDLTMLMASQALRITVKILHPMDKKSRDVYDAAGRQPA--HGTGRKGDKCEDYRHSQVFLPDDAALTYRGVGTGETTRLIEEAAVALTGGMTRASANELADIPEINRDSICRAGCHFAAVLSTDGRNVPFPVFKVAPPLTREL 188
            RML+ASV Y   DTVWG D T+L+ASQAL+ITVK+L P D   R   D +   P    G GRKGDK +D R SQ FL DDA       G G   R++ EA V LT    +AS  EL ++ E+ + + C  G HFAAV   D    PFP+ + APPL + L
Sbjct:   93 RMLLASVAYDCEDTVWGGDFTLLLASQALKITVKLLSPNDVMVRK-RDESSATPGTIRGAGRKGDKVDDTRLSQTFLADDAVSCLHIQGGG---RMVAEATVVLTSCTGQASVGELDNLVEVTKSTACPRGVHFAAVSKKDRSTPPFPLVRAAPPLFQAL 248
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP78_9PHAE1.490e-3238.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K454_9PHAE1.790e-2846.88SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 230..250
NoneNo IPR availableCOILSCoilCoilcoord: 267..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3548258..3550453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.288.1mRNA_P-fluviatile_contig1.288.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 3547826..3550675 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.288.1 ID=prot_P-fluviatile_contig1.288.1|Name=mRNA_P-fluviatile_contig1.288.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=332bp
MMTPSSIRENPPQVRWVQGRDDVSTTDHRFRMLIASVEYYTSDTVWGSDL
TMLMASQALRITVKILHPMDKKSRDVYDAAGRQPAHGTGRKGDKCEDYRH
SQVFLPDDAALTYRGVGTGETTRLIEEAAVALTGGMTRASANELADIPEI
NRDSICRAGCHFAAVLSTDGRNVPFPVFKVAPPLTRELDERLSKECDEER
AAYNRRRGIQPGSDEARAVAAAAVVAAATRRQARRELSRANRQLALEERM
RARQAEKGKVVGLIYEVEDHEERREKGQDQIQRHEESTHHRPSFAERAQA
GVQAELHQRRDEPSTGCWCQEGGRRKGSAEV*
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