prot_P-fluviatile_contig1.273.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.273.1
Unique Nameprot_P-fluviatile_contig1.273.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length308
Homology
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BLAST of mRNA_P-fluviatile_contig1.273.1 vs. uniprot
Match: A0A6H5K094_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K094_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 7.880e-65
Identity = 158/316 (50.00%), Postives = 179/316 (56.65%), Query Frame = 0 
Query:    1 MEQVFFRLHVRFVTTVTRLLSPKTRRVLEYVTLANAFLLVVSLAWLHIRFVNPKGGQRSAVSCLPDALERAGVDPAQLHVLQIHIRLPPDDRGGGAISASGTGSQTVPINSKVRSSSGRSSHRSFDRSKGNLGEE--SDSCRHRNGDRGGTGDPAVCSDGGVDAAATAPAGIAVVGATSAADSGAGDGP-------------------PLEFESPPSTPEIFYSMKLVTGKNAVGTLSGPGTLGIEK--YHGGTGAGDSGAXXXXXXXXXXXXXXXXXXXXXXGLVCGGAMEVRHSTVVQTLVDAFSWGKGGGTAV 293
            MEQVFFRLHVRFVTTVTRLLSPKTRR+LEYVTLANAFLLV SLAWLH RFVNPKG Q SAVSCLP ALE+AGVDPAQLHVLQIHIR PPDD              + P  S     S RS         G   E+  SDS RH  G  G  G   +   GG ++   +  G A    T + +     G                    P   +SPP +PEIFYSMKLVTGK+AVGTLSGPGTLGIE+    GG G   +                   XXXXX  +CG  +E +   +VQTL+DAFSWG  G T +
Sbjct:    1 MEQVFFRLHVRFVTTVTRLLSPKTRRLLEYVTLANAFLLVTSLAWLHTRFVNPKGSQGSAVSCLPAALEKAGVDPAQLHVLQIHIRQPPDDXXXXXXXXXXKNLMSFPDGSSRIDDSSRS---------GTNAEQQVSDSRRHSGGAAGDAG-LGISGLGGGESGYASATGTAASACTGSGEEEGAAGTMGSXXXXXXXXXXXXXWLLPPRLDSPPLSPEIFYSMKLVTGKDAVGTLSGPGTLGIERCVVKGGDGVDGN---------------NPAGXXXXXXXICGAVVEEKRPALVQTLMDAFSWGGKGETGI 291
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BLAST of mRNA_P-fluviatile_contig1.273.1 vs. uniprot
Match: D8LLK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK2_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 2.300e-53
Identity = 150/313 (47.92%), Postives = 164/313 (52.40%), Query Frame = 0 
Query:    1 MEQVFFRLHVRFVTTVTRLLSPKTRRVLEYVTLANAFLLVVSLAWLHIRFVNPKGGQRSAVSCLPDALERAGVDPAQLHVLQIHIRLPPDDRGGGAISASGTGSQTVPINSKVRSSSGRSSHRSFDRSKGNLGEESDSCRHRNG--DRG------GTGDPAVCSDGGVDAAATAPAGIAVVGATSAADSGAGDGP----------PLEFESPPSTPEIFYSMKLVTGKNAVGTLSGPGTLGIEK--YHGGTGAGDSGAXXXXXXXXXXXXXXXXXXXXXXGLVCGGAMEVRHSTVVQTLVDAFSWGKGGGTAV 293
            MEQVFFRLHVRFVTTVTRLLSPKTRR+LEYVTLANAFLLV SLAWLH RFVNPKG Q SAVSCLP ALE+AGVDPAQLHVLQIHIR PPDD                                                       D G      G       S  G  AA         VGA  A  S +              P   +SPP +PEIFYSMKLVTGK+AVGTLSGPGTLGIE+    GG G   +                   XXXXX  +CG  +E +  T+VQTL+DAFSWG  G T +
Sbjct:    1 MEQVFFRLHVRFVTTVTRLLSPKTRRLLEYVTLANAFLLVTSLAWLHTRFVNPKGRQGSAVSCLPAALEKAGVDPAQLHVLQIHIRQPPDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAADAGLGMSGLGXXXXXXXSVTGTTAATACTGSGEEVGAAGAIGSESXXXXXXXXXXXXLLPPRLDSPPQSPEIFYSMKLVTGKDAVGTLSGPGTLGIERCVVKGGDGVDGN---------------NPAGXXXXXXXICGAVVEEKRPTLVQTLMDAFSWGGKGETGI 298
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BLAST of mRNA_P-fluviatile_contig1.273.1 vs. uniprot
Match: A0A7S2WVH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVH7_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.040e-5
Identity = 30/56 (53.57%), Postives = 36/56 (64.29%), Query Frame = 0 
Query:    1 MEQVFFRLHVRFVTTVTRLLSPKTRRVLEYVTLANAFLLVVSLAWLHIRFVNPKGG 56
            MEQVFFRLHVR V T+TR  SP  RRV+EY  LA +  L   +  LH R + P+ G
Sbjct:    1 MEQVFFRLHVRCVRTITRACSPTFRRVVEYGLLALSVGLCSLVVALHTRHIAPRDG 56
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K094_9PHAE7.880e-6550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLK2_ECTSI2.300e-5347.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2WVH7_9STRA5.040e-553.57Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019144MembralinPFAMPF09746Membralincoord: 2..52
e-value: 6.2E-6
score: 25.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..308
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3345035..3347193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.273.1mRNA_P-fluviatile_contig1.273.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 3345035..3347321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.273.1 ID=prot_P-fluviatile_contig1.273.1|Name=mRNA_P-fluviatile_contig1.273.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=308bp
MEQVFFRLHVRFVTTVTRLLSPKTRRVLEYVTLANAFLLVVSLAWLHIRF
VNPKGGQRSAVSCLPDALERAGVDPAQLHVLQIHIRLPPDDRGGGAISAS
GTGSQTVPINSKVRSSSGRSSHRSFDRSKGNLGEESDSCRHRNGDRGGTG
DPAVCSDGGVDAAATAPAGIAVVGATSAADSGAGDGPPLEFESPPSTPEI
FYSMKLVTGKNAVGTLSGPGTLGIEKYHGGTGAGDSGAGGNRGDGDIGIG
IGGGDGIGGGGLVCGGAMEVRHSTVVQTLVDAFSWGKGGGTAVQAGAASA
AAAAPSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019144Membralin