prot_P-fluviatile_contig1.262.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.262.1
Unique Nameprot_P-fluviatile_contig1.262.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length148
Homology
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: D8LLJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLJ6_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 8.660e-95
Identity = 129/147 (87.76%), Postives = 140/147 (95.24%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPWDMEWRKRNGIEQPVHNRRRTPPKQRW 147
            MVFYQQIVTLRPRTNP DLTNIFRRAAA +LEEGGVVRSV NHG+RVLPYRFHS+HDIKE D+RWFSSGRWASAYYDASPA AKKME+QLW+EDKVIRV+TRRP+TKMD+IAS HERSNPWDMEWR RNGIEQPVHNRRRTPPK++W
Sbjct:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPATKMDRIASTHERSNPWDMEWRNRNGIEQPVHNRRRTPPKKKW 147          
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A835Z0N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N7_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.360e-27
Identity = 52/122 (42.62%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPWD 122
            M FYQ + T + RT P+ LT ++RR   TVLE+GG+VR V NHG++ L YRF +R  +  ++NR+ + GRW S Y+DA P    K++  L  +D  +R  T +P  KM+ I++ H+ +NPW+
Sbjct:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHK-TNPWE 121          
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A6S8YXD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YXD6_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.130e-21
Identity = 46/121 (38.02%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 121
            MVFY+ ++T +   +   LTN  +  ++ V+E GG+VR+V NHGIR LP+RF +R+  KE  NR++  GR+ S +YDASP    ++E ++  +D+++R T  +   K+  I + +E+ NP+
Sbjct:    1 MVFYECVLTAKNTASFASLTNTVKSISSIVVESGGIVRTVQNHGIRNLPHRFKARYPDKEG-NRYYKEGRFISVWYDASPRTLNQVENEIRLDDQILRYTHLKARNKLWYINNPNEKKNPY 120          
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A6T7JZ88_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T7JZ88_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.250e-21
Identity = 47/121 (38.84%), Postives = 79/121 (65.29%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 121
            MVFY+ ++T +      +LTN+ +  +  V+E GG+VRSV NHGIR LP+RF +++  KE  NR++  GR+ S +YDASP A ++++  L  +++V+R T  +P  K+     ++E+ NP+
Sbjct:    1 MVFYECVLTAKNTAPFMNLTNLMKTVSLKVVERGGIVRSVQNHGIRDLPHRFKAKYPDKEG-NRYYKKGRFISVFYDASPHAREEVQAILDLDEEVLRNTHLKPRNKVTYANIVNEKKNPY 120          
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A7S2IGM9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGM9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.060e-21
Identity = 46/121 (38.02%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 121
            MVFY+ ++T +       LT + +  ++TV+E GG+VR+V NHGIR LP+RF +++  KE  NR++  GR+ S +YDASP    K+E ++  +D+++R T  +   K+  I    E+ NP+
Sbjct:    1 MVFYECVLTAKNTAPFTSLTKLMKTISSTVVENGGIVRTVQNHGIRNLPHRFKAKYPDKEG-NRYYKKGRFISVWYDASPRVLAKVENEIRLDDQILRHTHLKARNKLWYINIASEKKNPY 120          
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A1E7FMF6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMF6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.700e-21
Identity = 45/121 (37.19%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 121
            MVFY+ +++ +  T+ K LT + ++ +  V+E GG+VRS+ NHG+R  P+RF +++       R++  GR+ S YYD++P   K++E  L   D+V+RVT  +  +K+D I   HE+ NP+
Sbjct:    1 MVFYECVLSTKHTTHFKALTALMKQVSLKVVENGGIVRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISIYYDSNPTTLKQVETVLTMNDQVLRVTHLKSRSKLDWINYKHEK-NPY 120          
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: K0TLA5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLA5_THAOC)

HSP 1 Score: 92.4 bits (228), Expect = 8.240e-21
Identity = 44/121 (36.36%), Postives = 79/121 (65.29%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 121
            MVFY+ ++T +  T+   LT++ +  +  ++E GG+VRS+ NHGIR LP+RF S++  +E  NR++  GR+ S +YD++P  AK++E  L   ++++R T  R S + +++  + E  NP+
Sbjct:   39 MVFYECLMTAKNTTHYNLLTSLMKEVSHKIVENGGIVRSIQNHGIRQLPHRFKSKYADREG-NRYYEKGRFISVFYDSNPVTAKQVETILNLNEEILRNTHLRASNRFNEVNDLLESRNPY 158          
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A7S1YM88_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM88_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 7.600e-20
Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 121
            MVFY+ ++T +       LT++ +  +  V+E GG+VRSV NHGIR L +RF +RH  ++   R F  GR+ S YYD+SPA  +++ + L  ++ V+R T  R   K+D I + +++ NP+
Sbjct:    1 MVFYECVITAKNTAPFYQLTSLMKEISLKVVENGGIVRSVQNHGIRDLAHRFRARHPDRDG-TRLFQKGRFISVYYDSSPAIQEEVGEILVMDENVLRATHLRARNKLDTINNPYQKKNPY 120          
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A1Z5JK56_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JK56_FISSO)

HSP 1 Score: 85.9 bits (211), Expect = 1.480e-18
Identity = 46/121 (38.02%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 121
            MVFY+ +VT +   +   LTN+ +  +  ++E GG+VR+V NHGIR LP+RF + +  +E  NR++S GR+ S YYDA+P    +++  L  +++V+R T  R  + +D I ++ E  NP+
Sbjct:    1 MVFYECVVTAKNTAHFHTLTNLVKLVSHEIVEGGGIVRAVHNHGIRTLPHRFKATYPDREG-NRYYSKGRFFSIYYDANPDTMSQVDTILKMDEEVLRSTHLRARSTLDFI-NLREDRNPY 119          
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A7S2MAY0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAY0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.170e-18
Identity = 40/124 (32.26%), Postives = 76/124 (61.29%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPWDME 124
            MVFY+ ++T +   +  +LT + +  +  ++  GG+VRS+ NHG+R LP+RF +++  +E  NR++  GR+ S +YDASP   +++E  L  +++++R T  +   K   + ++ E  NP+  E
Sbjct:    1 MVFYECLMTAKNTAHYNNLTALMKDISLKIVNNGGIVRSIQNHGVRQLPHRFRAKYADREG-NRYYEKGRFVSVFYDASPGIMRQVEGILNLDEQILRNTHLKGRNKFMDVNNVREAKNPYIQE 123          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LLJ6_ECTSI8.660e-9587.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0N7_9STRA5.360e-2742.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S8YXD6_9STRA1.130e-2138.02Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6T7JZ88_9STRA1.250e-2138.84Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A7S2IGM9_9STRA4.060e-2138.02Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1E7FMF6_9STRA5.700e-2137.19Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
K0TLA5_THAOC8.240e-2136.36Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S1YM88_9STRA7.600e-2038.02Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1Z5JK56_FISSO1.480e-1838.02Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2MAY0_9STRA2.170e-1832.26Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 1..128
e-value: 4.6E-20
score: 73.6
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 4..101
e-value: 5.3E-15
score: 55.5
IPR000529Ribosomal protein S6PANTHERPTHR21011MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6coord: 1..122
NoneNo IPR availablePANTHERPTHR21011:SF128S RIBOSOMAL PROTEIN S6, MITOCHONDRIALcoord: 1..122
IPR035980Ribosomal protein S6 superfamilySUPERFAMILY54995Ribosomal protein S6coord: 1..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:3224598..3226443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.262.1mRNA_P-fluviatile_contig1.262.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 3224581..3227280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.262.1 ID=prot_P-fluviatile_contig1.262.1|Name=mRNA_P-fluviatile_contig1.262.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=148bp
MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPY
RFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVT
TRRPSTKMDQIASIHERSNPWDMEWRKRNGIEQPVHNRRRTPPKQRW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR000529Ribosomal_S6
IPR035980Ribosomal_S6_sf