mRNA_P-fluviatile_contig1.262.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: D8LLJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLJ6_ECTSI) HSP 1 Score: 279 bits (713), Expect = 2.500e-90 Identity = 129/147 (87.76%), Postives = 140/147 (95.24%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPWDMEWRKRNGIEQPVHNRRRTPPKQRW 458
MVFYQQIVTLRPRTNP DLTNIFRRAAA +LEEGGVVRSV NHG+RVLPYRFHS+HDIKE D+RWFSSGRWASAYYDASPA AKKME+QLW+EDKVIRV+TRRP+TKMD+IAS HERSNPWDMEWR RNGIEQPVHNRRRTPPK++W
Sbjct: 1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPATKMDRIASTHERSNPWDMEWRNRNGIEQPVHNRRRTPPKKKW 147
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A835Z0N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N7_9STRA) HSP 1 Score: 107 bits (268), Expect = 6.630e-24 Identity = 52/122 (42.62%), Postives = 79/122 (64.75%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPWD 383
M FYQ + T + RT P+ LT ++RR TVLE+GG+VR V NHG++ L YRF +R + ++NR+ + GRW S Y+DA P K++ L +D +R T +P KM+ I++ H+ +NPW+
Sbjct: 1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHK-TNPWE 121
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A6S8YXD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YXD6_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.550e-19 Identity = 46/121 (38.02%), Postives = 78/121 (64.46%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 380
MVFY+ ++T + + LTN + ++ V+E GG+VR+V NHGIR LP+RF +R+ KE NR++ GR+ S +YDASP ++E ++ +D+++R T + K+ I + +E+ NP+
Sbjct: 1 MVFYECVLTAKNTASFASLTNTVKSISSIVVESGGIVRTVQNHGIRNLPHRFKARYPDKEG-NRYYKEGRFISVWYDASPRTLNQVENEIRLDDQILRYTHLKARNKLWYINNPNEKKNPY 120
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A6T7JZ88_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T7JZ88_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 6.340e-19 Identity = 47/121 (38.84%), Postives = 79/121 (65.29%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 380
MVFY+ ++T + +LTN+ + + V+E GG+VRSV NHGIR LP+RF +++ KE NR++ GR+ S +YDASP A ++++ L +++V+R T +P K+ ++E+ NP+
Sbjct: 1 MVFYECVLTAKNTAPFMNLTNLMKTVSLKVVERGGIVRSVQNHGIRDLPHRFKAKYPDKEG-NRYYKKGRFISVFYDASPHAREEVQAILDLDEEVLRNTHLKPRNKVTYANIVNEKKNPY 120
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A7S2IGM9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGM9_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.790e-18 Identity = 46/121 (38.02%), Postives = 76/121 (62.81%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 380
MVFY+ ++T + LT + + ++TV+E GG+VR+V NHGIR LP+RF +++ KE NR++ GR+ S +YDASP K+E ++ +D+++R T + K+ I E+ NP+
Sbjct: 1 MVFYECVLTAKNTAPFTSLTKLMKTISSTVVENGGIVRTVQNHGIRNLPHRFKAKYPDKEG-NRYYKKGRFISVWYDASPRVLAKVENEIRLDDQILRHTHLKARNKLWYINIASEKKNPY 120
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A1E7FMF6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMF6_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.680e-18 Identity = 45/121 (37.19%), Postives = 77/121 (63.64%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 380
MVFY+ +++ + T+ K LT + ++ + V+E GG+VRS+ NHG+R P+RF +++ R++ GR+ S YYD++P K++E L D+V+RVT + +K+D I HE+ NP+
Sbjct: 1 MVFYECVLSTKHTTHFKALTALMKQVSLKVVENGGIVRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISIYYDSNPTTLKQVETVLTMNDQVLRVTHLKSRSKLDWINYKHEK-NPY 120
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: K0TLA5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLA5_THAOC) HSP 1 Score: 91.7 bits (226), Expect = 3.780e-18 Identity = 44/121 (36.36%), Postives = 79/121 (65.29%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 380
MVFY+ ++T + T+ LT++ + + ++E GG+VRS+ NHGIR LP+RF S++ +E NR++ GR+ S +YD++P AK++E L ++++R T R S + +++ + E NP+
Sbjct: 39 MVFYECLMTAKNTTHYNLLTSLMKEVSHKIVENGGIVRSIQNHGIRQLPHRFKSKYADREG-NRYYEKGRFISVFYDSNPVTAKQVETILNLNEEILRNTHLRASNRFNEVNDLLESRNPY 158
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A7S1YM88_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM88_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.180e-17 Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 380
MVFY+ ++T + LT++ + + V+E GG+VRSV NHGIR L +RF +RH ++ R F GR+ S YYD+SPA +++ + L ++ V+R T R K+D I + +++ NP+
Sbjct: 1 MVFYECVITAKNTAPFYQLTSLMKEISLKVVENGGIVRSVQNHGIRDLAHRFRARHPDRDG-TRLFQKGRFISVYYDSSPAIQEEVGEILVMDENVLRATHLRARNKLDTINNPYQKKNPY 120
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A1Z5JK56_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JK56_FISSO) HSP 1 Score: 85.1 bits (209), Expect = 4.220e-16 Identity = 46/121 (38.02%), Postives = 77/121 (63.64%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPW 380
MVFY+ +VT + + LTN+ + + ++E GG+VR+V NHGIR LP+RF + + +E NR++S GR+ S YYDA+P +++ L +++V+R T R + +D I ++ E NP+
Sbjct: 1 MVFYECVVTAKNTAHFHTLTNLVKLVSHEIVEGGGIVRAVHNHGIRTLPHRFKATYPDREG-NRYYSKGRFFSIYYDANPDTMSQVDTILKMDEEVLRSTHLRARSTLDFI-NLREDRNPY 119
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Match: A0A7S2MAY0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAY0_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 5.820e-16 Identity = 40/124 (32.26%), Postives = 76/124 (61.29%), Query Frame = 3
Query: 18 MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYRFHSRHDIKENDNRWFSSGRWASAYYDASPAAAKKMEQQLWSEDKVIRVTTRRPSTKMDQIASIHERSNPWDME 389
MVFY+ ++T + + +LT + + + ++ GG+VRS+ NHG+R LP+RF +++ +E NR++ GR+ S +YDASP +++E L +++++R T + K + ++ E NP+ E
Sbjct: 1 MVFYECLMTAKNTAHYNNLTALMKDISLKIVNNGGIVRSIQNHGVRQLPHRFRAKYADREG-NRYYEKGRFVSVFYDASPGIMRQVEGILNLDEQILRNTHLKGRNKFMDVNNVREAKNPYIQE 123 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.262.1 >prot_P-fluviatile_contig1.262.1 ID=prot_P-fluviatile_contig1.262.1|Name=mRNA_P-fluviatile_contig1.262.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=148bp MVFYQQIVTLRPRTNPKDLTNIFRRAAATVLEEGGVVRSVVNHGIRVLPYback to top mRNA from alignment at P-fluviatile_contig1:3224581..3227280+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.262.1 ID=mRNA_P-fluviatile_contig1.262.1|Name=mRNA_P-fluviatile_contig1.262.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2700bp|location=Sequence derived from alignment at P-fluviatile_contig1:3224581..3227280+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:3224581..3227280+ >mRNA_P-fluviatile_contig1.262.1 ID=mRNA_P-fluviatile_contig1.262.1|Name=mRNA_P-fluviatile_contig1.262.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=888bp|location=Sequence derived from alignment at P-fluviatile_contig1:3224581..3227280+ (Porterinema fluviatile SAG_2381)back to top |