prot_P-fluviatile_contig1.16.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.16.1
Unique Nameprot_P-fluviatile_contig1.16.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length459
Homology
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BLAST of mRNA_P-fluviatile_contig1.16.1 vs. uniprot
Match: A0A6H5KJ38_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ38_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 5.130e-24
Identity = 114/323 (35.29%), Postives = 141/323 (43.65%), Query Frame = 0 
Query:   17 SFRAPGQAMTVTTPPPDIGGLAAGCGGRSPVFFPALRIVMEDRTGGR-WLDSALELQCSCFEACKACRELAPVRLLVSDETPDHLWRQGAATRRAPLEARPRYGSSNSGDG------------------------GGGSSGYICDFSSSLSDVGVDRSSDSGSDIXXXXXXXS----SGFSWENGQSREDSSVCEGQRPSQRRRVRAPGCFFSFSSCRYLPPLRIVGMVWERHTLADIAFG-PELAXXXXXXGVIEPLHGLAWGEPGLRRLTLTS-NWNLPPXXXXXXXXNGDGSLNIDPGHNWPPLLEELVFGKYFDQAVNR 308
            + RA G A+  TT               S + F ALR+V+EDR GGR WL S  ELQ  CF+ACK CR++ PVRL VSD TP HLWR+     +A  E      +     G                        G GSSG  C                     XXXXXXX     S  SW         S+ E +   + R    P  +      R +PPLRI GMVWER  LA  +FG PEL         IEPLHG A     L+R+TL+S N +LP           DG +N      WPP L+EL FG+ F+  +N+
Sbjct:   64 AVRATGAAVRTTT---------------SALLFSALRMVLEDRVGGRGWLGSVRELQSVCFDACKECRKVVPVRLRVSDSTPGHLWRKETTADKAMAETTAEAVAELEPGGSXXXXXXXXXXXXXXXKRSVIESYGSGSSGSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSECSW------SLPSLWEREAAIETRTDTIPSPYSPPD--RDVPPLRIAGMVWERSALAKASFGRPELPEAAFGMAAIEPLHGAACTTT-LKRITLSSKNSHLPTTVMLDAK---DGEIN------WPPSLKELTFGERFNAPINQ 353
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ38_9PHAE5.130e-2435.29Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 244..458
e-value: 1.5E-7
score: 32.2
IPR008615FNIPPFAMPF05725FNIPcoord: 412..455
e-value: 1.7E-8
score: 34.5
coord: 368..410
e-value: 7.5E-7
score: 29.2
coord: 324..365
e-value: 5.1E-6
score: 26.5
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 290..387
coord: 378..459
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 290..387
coord: 378..459
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 286..456

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:203032..204408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.16.1mRNA_P-fluviatile_contig1.16.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 203032..204408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.16.1 ID=prot_P-fluviatile_contig1.16.1|Name=mRNA_P-fluviatile_contig1.16.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=459bp
SRGGFKSNGAEPPHVGSFRAPGQAMTVTTPPPDIGGLAAGCGGRSPVFFP
ALRIVMEDRTGGRWLDSALELQCSCFEACKACRELAPVRLLVSDETPDHL
WRQGAATRRAPLEARPRYGSSNSGDGGGGSSGYICDFSSSLSDVGVDRSS
DSGSDISSGLSDVSSGFSWENGQSREDSSVCEGQRPSQRRRVRAPGCFFS
FSSCRYLPPLRIVGMVWERHTLADIAFGPELAEITFGPGVIEPLHGLAWG
EPGLRRLTLTSNWNLPPPPAAAAAANGDGSLNIDPGHNWPPLLEELVFGK
YFDQAVNRIEFPASLRQLTFGEHFNHSVEGVAWPPNLQELAFGKNFNQGI
DRVSWPASLRRLSFGVHFDQPVAGVTWPASLQHLSFGYRFNQPIAGVFWP
ASLQSLSFGHDFNKAISRVAWPASLRRLSFGYDFDQPIADAALPPSLRSL
LFGYCFNHP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP