mRNA_P-fluviatile_contig8.14646.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: A0A835ZH45_9STRA (DNA-directed RNA polymerases I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH45_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.160e-45 Identity = 81/131 (61.83%), Postives = 103/131 (78.63%), Query Frame = 1
Query: 22 DGDGGEEYDVFANEDDDPQLEEAAPLEADPTEMDVVDAADAGGAG-----LRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIENETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIM 399
DGD + YD FA++ D+ EE A ++++++A + GGA ++ A +RIT+KYMTKYE+ARILGTRALQISMNAP+MVD+EN TDPLKIA KELRERKIPIKIRRYLPDGS+EDWA+EEL++
Sbjct: 4 DGDHADAYDAFADDGDEDMQEEVADEVGQAGQLELMEADETGGAAPGAPPVKPAQERITSKYMTKYEKARILGTRALQISMNAPIMVDLENMTDPLKIAEKELRERKIPIKIRRYLPDGSYEDWALEELMI 134
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: A0A1Z5JVB2_FISSO (DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVB2_FISSO) HSP 1 Score: 149 bits (375), Expect = 1.770e-41 Identity = 86/146 (58.90%), Postives = 103/146 (70.55%), Query Frame = 1
Query: 1 MSDNEYGDGDGG---EEYDVFANEDDDPQLEEAAPLEADPTEMDV---------VDAADAGGAGLRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIENETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIMD 402
MSD+E G GG E VF EDD P+ E L++D +DV V GG +A +RITT+Y+TKYE+AR+LGTRALQISMNAPVMVD++ ETDPLKIA KELRERKIPI IRRY+PDGSHEDWA++ELI+D
Sbjct: 1 MSDDEDPIGSGGGFDNEGGVF--EDDQPEAAEDDELQSDDEGLDVTGEHTSIVGVGEGSEGGGRSVAAAERITTRYLTKYEKARVLGTRALQISMNAPVMVDLDGETDPLKIAEKELRERKIPIIIRRYMPDGSHEDWAVDELIVD 144
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: A0A7R9ZBL4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBL4_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.980e-41 Identity = 84/135 (62.22%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 1 MSDNEYGDGDGGEEYDVFANEDDDPQLE-EAAPLEADPTEMDVVDAADAGGAGLRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIENETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIMD 402
M ++ G G G E+ DV DD+ Q + AA E D + + A G G A+ R+TTKY+TKYERAR+LGTRALQISMNAPVMVD++ ETDPLKIAMKELRERKIPI IRRYLPDGSHEDW+I+ELI+D
Sbjct: 30 MGADDGGRGGGNEDLDVTGERDDNAQEDMNAANNEGDGELL----GSSAPGGGATGAE-RVTTKYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLKIAMKELRERKIPIIIRRYLPDGSHEDWSIDELIVD 159
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: D8LKY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY3_ECTSI) HSP 1 Score: 146 bits (368), Expect = 4.280e-41 Identity = 74/81 (91.36%), Postives = 78/81 (96.30%), Query Frame = 1
Query: 1 MSDNEYGDGDGGEEYDVFANEDDDPQLEEAAPLEADPTEMDVVDAADAGGAGLRSADDRITTKYMTKYERARILGTRALQI 243
MSDNEYGDGDGGEEYDVFANEDDDPQ++E PLEADP +M+VVDAADAGGAGLRSADDRITTKYMTKYERARILGTRALQI
Sbjct: 1 MSDNEYGDGDGGEEYDVFANEDDDPQVDEPTPLEADPADMEVVDAADAGGAGLRSADDRITTKYMTKYERARILGTRALQI 81
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: A0A5P1E299_ASPOF (Uncharacterized protein n=2 Tax=Petrosaviidae TaxID=1437197 RepID=A0A5P1E299_ASPOF) HSP 1 Score: 146 bits (368), Expect = 1.920e-40 Identity = 81/140 (57.86%), Postives = 100/140 (71.43%), Query Frame = 1
Query: 1 MSDNEYGDGDGGEEYDVFANEDDDPQLEEAAPLEADPTEMDVVDAADAGGAGLRSADD------RITTKYMTKYERARILGTRALQISMNAPVMVDIENETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIMD 402
M+D +Y D D G + +E +P++EE A ++A+ DV D D G D+ R TTKYMTKYERARILGTRALQISMNAPVMV++E ETDPL+IAMKELRERKIP IRRYLPDGS+EDW ++ELI++
Sbjct: 1 MADEDYNDMDMG-----YEDEPPEPEIEEGAEIDAENNNEDVPD--DIVGGEAEDKDEASVERSRKTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 133
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: A0A6U3VZ54_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VZ54_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.740e-40 Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 100 EADPTEMDVVDAADAG-----GAGLRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIENETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIMD 402
E DP E D V+ + G G+ + +R+TT+Y+TKYERAR+LGTRALQISMNAPVMVD++ ETDPLKIAM+ELRERKIPI IRRYLPDGSHEDW I+ELI+D
Sbjct: 91 EHDPNEQDDVNVMNEGEMEILGSSGSALSERVTTRYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLKIAMRELRERKIPIIIRRYLPDGSHEDWKIDELIVD 196
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: B8C3F5_THAPS (Dna-directed RNA polymerase i (Fragment) n=2 Tax=Bacillariophyta TaxID=2836 RepID=B8C3F5_THAPS) HSP 1 Score: 142 bits (357), Expect = 1.130e-39 Identity = 66/76 (86.84%), Postives = 72/76 (94.74%), Query Frame = 1
Query: 175 RITTKYMTKYERARILGTRALQISMNAPVMVDIENETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIMD 402
RITT+Y+TKYERAR+LGTRALQISMNAPVMVD+E ETDPLKIA KELRERKIPI IRRYLPDGSHEDW I+ELI+D
Sbjct: 1 RITTRYLTKYERARVLGTRALQISMNAPVMVDLEGETDPLKIAQKELRERKIPIVIRRYLPDGSHEDWGIDELIVD 76
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: A0A7S2E4M0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E4M0_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.290e-39 Identity = 75/109 (68.81%), Postives = 85/109 (77.98%), Query Frame = 1
Query: 100 EADPTEMDVVDAADAGG--------AGLRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIENETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIMD 402
E DP D V+A + G A S +R+TTKY+TKYERAR+LGTRALQISMNAPVMVD++ ETDPLKIAMKELRERKIPI IRRYLPDGSHEDW I+ELI+D
Sbjct: 52 EHDPNAQDDVNAVNNEGDLELLGSSAPGGSRAERVTTKYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLKIAMKELRERKIPIIIRRYLPDGSHEDWKIDELIVD 160
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: A0A6U0JRN7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JRN7_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.990e-39 Identity = 70/90 (77.78%), Postives = 80/90 (88.89%), Query Frame = 1
Query: 133 AADAGGAGLRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIENETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIMD 402
AA GGA +R+TT+Y+TKYERAR+LGTRALQISMNAPVMVD++ ETDPLKIAMKELRERKIPI IRRYLPDGSHEDW+I+ELI+D
Sbjct: 114 AAPGGGAA-----ERVTTRYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLKIAMKELRERKIPIIIRRYLPDGSHEDWSIDELIVD 198
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Match: A0A7S2Y910_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y910_9STRA) HSP 1 Score: 143 bits (361), Expect = 4.080e-39 Identity = 67/81 (82.72%), Postives = 76/81 (93.83%), Query Frame = 1
Query: 160 RSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIENETDPLKIAMKELRERKIPIKIRRYLPDGSHEDWAIEELIMD 402
R+A +RITTKY+TKYERAR+LGTRALQISMNAPVMVD++ ETDPL+IA KELRERKIPI IRRYLPDGSHEDW I+ELI+D
Sbjct: 84 RAATERITTKYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLRIAEKELRERKIPIIIRRYLPDGSHEDWKIDELIID 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14646.1 >prot_P-fluviatile_contig8.14646.1 ID=prot_P-fluviatile_contig8.14646.1|Name=mRNA_P-fluviatile_contig8.14646.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=135bp MSDNEYGDGDGGEEYDVFANEDDDPQLEEAAPLEADPTEMDVVDAADAGGback to top mRNA from alignment at P-fluviatile_contig8:3514600..3517011- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14646.1 ID=mRNA_P-fluviatile_contig8.14646.1|Name=mRNA_P-fluviatile_contig8.14646.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2412bp|location=Sequence derived from alignment at P-fluviatile_contig8:3514600..3517011- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:3514600..3517011- >mRNA_P-fluviatile_contig8.14646.1 ID=mRNA_P-fluviatile_contig8.14646.1|Name=mRNA_P-fluviatile_contig8.14646.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=810bp|location=Sequence derived from alignment at P-fluviatile_contig8:3514600..3517011- (Porterinema fluviatile SAG_2381)back to top |