mRNA_P-fluviatile_contig12.1407.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1407.1
Unique NamemRNA_P-fluviatile_contig12.1407.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: A0A6H5KKC3_9PHAE (LHCP protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKC3_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 6.080e-117
Identity = 188/239 (78.66%), Postives = 200/239 (83.68%), Query Frame = 1 
Query:    1 MKCAAAVALMMASAEAFVPSTSVLPTSSRATSSSSLQMVFNFGKAAKSATKAVKKAVPKKQAAPTNAVEGLVGYDIETGGVPFDPLNFGKNCPPQQMQWYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETGVGGDLGFDPFGLRPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDSLADFA 717
            MKCA A ALM+ASA AFVPS + LPT +   SSSSLQM+  FG+ +K A KA     P  +   TNAV+GLVG DIETGG PFDPL FGKNCPPQQMQWYRAAELKHGRV MLAA GQITQHFTHWNDPSGIFDK+ SAWGAMQQVYEQRPFAF+QIILAIFA EVY NK+ EE   GGDLGFDP GL+PSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDSLA  A
Sbjct:    1 MKCATAFALMVASANAFVPS-APLPTVTSRASSSSLQMIGGFGRKSKPAPKA-----PPARPVSTNAVDGLVGADIETGG-PFDPLGFGKNCPPQQMQWYRAAELKHGRVCMLAAFGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIILAIFAVEVYGNKRQEENEAGGDLGFDPLGLKPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDSLAGLA 232
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: A0A0G4GYX1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GYX1_VITBC)

HSP 1 Score: 182 bits (463), Expect = 8.710e-50
Identity = 94/172 (54.65%), Postives = 117/172 (68.02%), Query Frame = 1 
Query:  193 TNAVEGLVGYDIETGGVPFDPLNFGKNCPPQQMQWYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETGVG-GDLGFDPFGLRPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDSL 705
            TNA +GL+G D+E     FDPL F  N   + ++WYRAAELKHGRV MLAA GQ+ Q F H  DPSG+FD T+S++GA  +V  +RP+A +QI+LAIFA EV   K   + G   GDL FDPF +R  +PE WE  QLRELKNGRLAM  I  M+VQE I+G GV+ +   L
Sbjct:   48 TNA-QGLIGSDLEW--PEFDPLGFTNNISDETLEWYRAAELKHGRVCMLAALGQLVQSFWHLPDPSGVFDSTDSSFGAFNKVVSERPWAAIQILLAIFAVEVLGAKTQAKPGQAPGDLDFDPFKVRSDDPEIWEATQLRELKNGRLAMIGITAMLVQEAISGKGVIAQWQGL 216
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: A0A835YT25_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT25_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.300e-48
Identity = 90/165 (54.55%), Postives = 112/165 (67.88%), Query Frame = 1 
Query:  205 EGLVGYDIETGGVPFDPLNFGKNCPPQQMQWYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETGVG-GDLGFDPFGLRPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKV 696
            EGLVG D+E     +DPL F  N  P  + WYRAAELKHGRVAMLAA G+I Q + H  DP  +F ++   W A+QQVY +RP A  QI+LAIFA E     +  + G   GDL +DP  L+PS+PE WE+VQLRELKNGRLAM AI G  VQE++TG G +E++
Sbjct:   45 EGLVGSDLEL--ATWDPLGFTNNQNPDTINWYRAAELKHGRVAMLAALGEIFQSYYHLPDP--VFSQSARPWDALQQVYAERPLAVAQILLAIFACEAIGQAQQAKPGQAPGDLNWDPLNLKPSDPETWEKVQLRELKNGRLAMMAIAGFFVQENLTGQGPIEQI 205
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: FCP_CHAMQ (Fucoxanthin-chlorophyll a-c binding protein, chloroplastic n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=FCP_CHAMQ)

HSP 1 Score: 171 bits (434), Expect = 1.100e-45
Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 1 
Query:  196 NAVEGLVGYDIETGGVPFDPLNFGKNCPPQQMQWYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETG-VGGDLGFDPFGLRPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLE 690
            ++ EGL+G D+E     FDPL F  N  P  ++WYRAAELKHGRVAMLAA GQ+ Q F H  DP  +F ++   W A+ +V  +RP A VQI LAIFA E        + G   GDLG+DP  LR SN E +ER QLRELKNGRLAM AI  MIVQE++TG GV+E
Sbjct:   40 SSAEGLIGSDLEL--PEFDPLGFTNNPAPGALEWYRAAELKHGRVAMLAALGQLVQSFYHLPDP--VFSESAKPWQALVKVCNERPLAAVQIGLAIFACEAIGQANQAKPGQAAGDLGWDPLNLRGSNEEIFERAQLRELKNGRLAMIAITAMIVQENLTGYGVIE 201
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: W7TCK1_9STRA (Chloroplast light harvesting protein isoform 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCK1_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.070e-43
Identity = 87/167 (52.10%), Postives = 110/167 (65.87%), Query Frame = 1 
Query:  196 NAVEGLVGYDIETGGVPFDPLNFGKNCPPQQMQWYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETGVG-GDLGFDPFGLRPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEK 693
            ++ +GL G DIE     FDPL F  N  P+ + WYRAAELKHGRVAMLAA GQI QHF    D SG+F   +    A+ +V  +RP A +QI LAIFA E        + G   GDLG+DP  L+  +PE + +VQ RELKNGRLAM AI GM+VQE++TG+GV+E+
Sbjct:   39 SSAQGLAGSDIEF--PEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQ 203
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: A0A0G4GRR2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GRR2_9ALVE)

HSP 1 Score: 157 bits (398), Expect = 9.660e-41
Identity = 101/228 (44.30%), Postives = 132/228 (57.89%), Query Frame = 1 
Query:   10 AAAVALMMASAEAFVPSTSVLPTSSRATSSSSLQMVFNFGKAAKSATKAVKKAVPKKQAAPTNAVEGLVGYDIETGGVPFDPLNFGKNCPPQQMQWYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETG-VGGDLGFDPFGLRPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLE 690
            A A++L ++S  AFVPS++ L  SSR + S    +    G+                     NAV G+ G D E     FDP+ F +N P + ++WYRAAELKHGRV MLAA G I    TH   P   F+   S  GA+ ++ E+RP+A +QI+LAIFA E    K   E G  GGDLGFDP GL+PS+PE  E  QLRE+KNGRLAM AILG   QE++T   +++
Sbjct:    5 AVALSLSVSSCTAFVPSSNGL-LSSRPSRSGKSSLDMKLGR---------------------NAV-GMPGTDFELPD--FDPIGFTQNAPLETLEWYRAAELKHGRVCMLAALGNIVAGITHL--PDTCFEGKGSL-GAVYKIMEERPWAGLQIVLAIFAVEALGQKIQSEPGREGGDLGFDPLGLKPSDPELLEATQLREIKNGRLAMIAILGQWAQEYVTNRPIID 204
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: A0A7S4UG07_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UG07_9DINO)

HSP 1 Score: 149 bits (375), Expect = 2.450e-38
Identity = 80/133 (60.15%), Postives = 94/133 (70.68%), Query Frame = 1 
Query:  295 WYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETGVG-GDLGFDPFGLRPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLE 690
            WYRAAELKHGRVAMLAA GQI Q F    DP  +F +  + W AM +VYE+RP A VQI+LA FA E          G   GDLGFDP  L+ ++PE +ERVQLRELKNGRLAM+AI  MIVQE++TG GV+E
Sbjct:    1 WYRAAELKHGRVAMLAALGQIFQSFYTLPDP--VFAEKANPWQAMIKVYEERPLAMVQILLAAFACEAAGAFIQARPGQAPGDLGFDPLNLKSNDPEIFERVQLRELKNGRLAMWAIAAMIVQENLTGYGVIE 131
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: A0A835Z156_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z156_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.360e-37
Identity = 94/231 (40.69%), Postives = 125/231 (54.11%), Query Frame = 1 
Query:   10 AAAVALMMASAEAFVPSTSVLPTSSRATSSSSLQMVFNFGKAAKSATKAVKKAVPKKQAAPTNAVEGLVGYDIETGGVPFDPLNFGKNCPPQQMQWYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETGVGGDLGFDPFGLRPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDS 702
            A A   ++A A AFVPS+      +R  SSS++QM                            + +GLVG  +ETGGV +DP N       + + WYRAAELKHGRV MLAA G + Q +  W  P  +F  T +   A+ Q+Y +RP A  QI+LAI A EV  +   + T  G DL +DP GL P +PE    +QL+ELKNGRLAM A  G  +QE +TG G +E++ S
Sbjct:    6 AVAALALVAGASAFVPSSFSGAQVARVASSSAMQM----------------------------SADGLVGASVETGGV-WDPANLASKASEEDLAWYRAAELKHGRVCMLAAVGCLVQGY--WQLPDPVFSNTKAV-DAVAQIYTERPGAIYQILLAIAAIEVLGSSIQKYTAPG-DLKWDPLGLAPEDPEELATLQLKELKNGRLAMVATAGFFLQEALTGQGAVEQITS 203
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: A0A0G4F0S3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F0S3_VITBC)

HSP 1 Score: 147 bits (370), Expect = 1.060e-36
Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = 1 
Query:  208 GLVGYDIETGGVPFDPLNFGKNCPPQQMQWYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETGVGGDLGFDPFGLRPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKV 696
            GLVG DI+     FDPL   K    + ++WYRAAELKHGRVAMLAA G + Q+   +  P   F + N    A+ +++ +RP A +QI+ AI A EV  N+   +T  GGDL +DP G++P++PE + ++QLRELKNGRLAM ++LGM  QE +T  G ++++
Sbjct:   56 GLVGNDIDAPN--FDPLGLSKTADDETLKWYRAAELKHGRVAMLAALGFLVQNI--YQLPDSPFQEANPI-NAVYKLWSERPLAIMQILTAIAAIEVLGNQVQLQTEDGGDLKWDPLGIKPNDPEEFRKMQLRELKNGRLAMISVLGMTAQEALTDQGPIDQI 213
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BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Match: A0A0G4ESK4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ESK4_VITBC)

HSP 1 Score: 146 bits (369), Expect = 1.830e-36
Identity = 82/169 (48.52%), Postives = 107/169 (63.31%), Query Frame = 1 
Query:  208 GLVGYDIETGGVPFDPLNFGK-NCPPQQMQWYRAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQRPFAFVQIILAIFAAEVYANKKYEETGVGGDLGFDPFGLRP-----SNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKV 696
            GLVG DIE     FDP      +  P+ + WYRAAELKHGR+ MLAA G  TQ      DPSG+F +T     A+ +V  +RP A +Q++LAI A EV A  +  ++   GDLGFDP  L+      SNPEA+E++QLRELKNGRLAM A  GM++Q+ +TG   LE++
Sbjct:   50 GLVGSDIEAPN--FDPWKLAAGDLEPETLSWYRAAELKHGRICMLAALGLTTQEVVQLPDPSGVFSETKGI-PALVKVANERPGAIIQLLLAIGAIEVAALNR-ADSAAPGDLGFDPLNLQQKLGLASNPEAFEKMQLRELKNGRLAMVATAGMLIQQFLTGQATLEQL 214
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKC3_9PHAE6.080e-11778.66LHCP protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A0G4GYX1_VITBC8.710e-5054.65Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A835YT25_9STRA3.300e-4854.55Light harvesting complex protein n=2 Tax=Tribonema... [more]
FCP_CHAMQ1.100e-4554.82Fucoxanthin-chlorophyll a-c binding protein, chlor... [more]
W7TCK1_9STRA1.070e-4352.10Chloroplast light harvesting protein isoform 4 n=2... [more]
A0A0G4GRR2_9ALVE9.660e-4144.30Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S4UG07_9DINO2.450e-3860.15Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A835Z156_9STRA1.360e-3740.69Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A0G4F0S3_VITBC1.060e-3646.01Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4ESK4_VITBC1.830e-3648.52Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:1260562..1266288 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score105.1
Seed ortholog evalue4.5e-20
Seed eggNOG ortholog159749.K0T193
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S5AH@2759,2XCIH@2836
COG Functional cat.P
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-15_000490.1
Exons3
Model size2057
Cds size720
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1407.1prot_P-fluviatile_contig12.1407.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 1261899..1266288 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815505.088948-UTR-P-fluviatile_contig12:1260561..12618981622815505.088948-UTR-P-fluviatile_contig12:1260561..1261898Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1260562..1261898 -
1693562077.8451145-UTR-P-fluviatile_contig12:1260561..12618981693562077.8451145-UTR-P-fluviatile_contig12:1260561..1261898Porterinema fluviatile SAG_2381UTRP-fluviatile_contig12 1260562..1261898 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815505.1000364-CDS-P-fluviatile_contig12:1261898..12621831622815505.1000364-CDS-P-fluviatile_contig12:1261898..1262183Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1261899..1262183 -
1693562077.8603365-CDS-P-fluviatile_contig12:1261898..12621831693562077.8603365-CDS-P-fluviatile_contig12:1261898..1262183Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1261899..1262183 -
1622815505.11265-CDS-P-fluviatile_contig12:1263817..12641481622815505.11265-CDS-P-fluviatile_contig12:1263817..1264148Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1263818..1264148 -
1693562077.8694956-CDS-P-fluviatile_contig12:1263817..12641481693562077.8694956-CDS-P-fluviatile_contig12:1263817..1264148Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1263818..1264148 -
1622815505.1235518-CDS-P-fluviatile_contig12:1266184..12662881622815505.1235518-CDS-P-fluviatile_contig12:1266184..1266288Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1266185..1266288 -
1693562077.8790905-CDS-P-fluviatile_contig12:1266184..12662881693562077.8790905-CDS-P-fluviatile_contig12:1266184..1266288Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 1266185..1266288 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1407.1

>prot_P-fluviatile_contig12.1407.1 ID=prot_P-fluviatile_contig12.1407.1|Name=mRNA_P-fluviatile_contig12.1407.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=240bp
MKCAAAVALMMASAEAFVPSTSVLPTSSRATSSSSLQMVFNFGKAAKSAT
KAVKKAVPKKQAAPTNAVEGLVGYDIETGGVPFDPLNFGKNCPPQQMQWY
RAAELKHGRVAMLAAAGQITQHFTHWNDPSGIFDKTNSAWGAMQQVYEQR
PFAFVQIILAIFAAEVYANKKYEETGVGGDLGFDPFGLRPSNPEAWERVQ
LRELKNGRLAMFAILGMIVQEHITGVGVLEKVDSLADFA*
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mRNA from alignment at P-fluviatile_contig12:1260562..1266288-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1407.1 ID=mRNA_P-fluviatile_contig12.1407.1|Name=mRNA_P-fluviatile_contig12.1407.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5727bp|location=Sequence derived from alignment at P-fluviatile_contig12:1260562..1266288- (Porterinema fluviatile SAG_2381)
ATGAAGTGCGCCGCAGCAGTTGCCCTTATGATGGCCTCGGCCGAGGCCTT
CGTACCGAGCACTTCGGTGCTCCCGACTTCGTCTCGCGCCACCTCGTCAT
CGAGGTGAGAAAAAGAGCTCGCGTGAGGTGGAGCCGTGAGTGTGCACGAG
ACCCATCAGAGCGAGAGCTGCGGCGGCGTTTCCCACGCGGTTTATCGCAA
ACGGAGCAGGAGCGAGGAATGGACCTGCTTTGTATTGTGCCATATGTCTT
GCGTGTGTGCCGTTCCTTCGTGGAAGGTGTATGTGATGAGCCACCCGCTG
CCGTGCGTGAATCGCCAAACATGCGCGATGTGCGCACTGCCGTTGAAAAG
ACTTGCAGCAAAGCGGTACACTGTATCAATTATTGCAAGGTATACCGTGG
CTGGGGTCTCCCTAGCACACATACATGTCGCTCCTTGTTGTGGGATCTCA
TCGCGGTTAGGTCTCGTACTGGCGCCGTGTAGACTTTGGATGCTGTCTTA
GCTGTGTTGTGCATGCACCCACCACCGTTCTTGTATGCGAACAGAGAAAC
AAGTGGCATCCCCCCCCCCCTTTAATAGTACGTGACTACGCGCTGTGACA
CGTAACGCAAACATGATGGATCACAGTCGTCCAATTCTATTGTAAACAGC
AGCACTCAAGCCAAAATTGCTCTTGCGGGGCATAGTTGCACACAAAAGTT
AATCCTGCTCATAAACATTGGAGCCATCGCTTGCTCTTCTCGTGTAATGT
GTGTTCGTACGGGGACGAGACACGTGCGTTTCCTCGCGCCCGCTCTCGTG
GCACAAATCTTGACTGAATCCGCGTCTCCGGCAGACCCTTTTTTTTAAGC
CTGTTCAAACACGACCGTTGAGCCTTGTTCAAGTTGGTCCAGCCAAGGTT
ATCGCAATTCTAAACGCTATCCATGTGCCAGTACTGCATGGATCGTACAC
ACTTCCGCGCGAAATGCCTCGCCACCGCAGTCGCTGATGGCTGCTGAATT
TTTTGTAAGAGTTTAGATCAGTGAGGCATTTTCCACACGTTCGTGCTCGT
TCTTTGCTAGCATCGCCGTAGCATCGCCGCACATCTTCCCCGAAAATTCC
GCCAGCAGGCCACCCAGGTCTTGATTGTTACCAGTGGCGTGGGATAAAGG
ATGGAACCCGGAGGTTGACGGTTACAAAGCTGGGTAAAAAAACCCGGCCA
TTTTTCCCCGTAGTCGGAGCAGCGGCACGAACGAGCACAATGTGGCTCTC
TACGAAACGTCTCTACAATATATATCCTCGTCCTCGAAAGCCAATCTCAA
GACGACGGGTGCCGGATCTCTCGCCCTTTCCTTGCAGTCAACTTGATTTT
TTCAAAGGTGGGCGTTAGCTCGTGTGCCAAGCCACCGATTCTTGCGGTGC
TTGAAGGCCCTGCAATCCATCTTTTTGCGGCCGAGTCTGTTGACTCGTTT
AAAAATCCGGTATTTCTGGACTGAATGCTACTCCGGAGTACATGTTTCCT
CATTCGAAATGGAGCGGTTTCCGATACACGGTCGCCTCTCTCGTCTCGTC
ACTTCAATCGCCTTTTATCGGGACTACTAGTGTATCTGCGTCCGCCGCGA
TTCCGATAGCACCAGTCACCAAAACCCTGTCGTTCAAGGGCGCCGGTTGT
TTTGTTGGCTTCCGCCGCCGTACGTGTACCCCCTCCTGAAACGCACCAAG
TCGAGCCTCATCTTTACACTCTTGACTGGCCTCGCAATGGTTTCGCTAGT
CCTCTGGATCCCTCAGATGCAGTCATTCCTGAGTCTCTCGGTCTCGCTCC
CACCTGTTTTCCGTTCCCTCTCACGCAAGCACAGCATCACGCCGAAACTT
GAGCAAGGACGTCACGATGTGTTTTTCTACTTCATCGAGAATCATGCTGA
CATAAATATTTCTGACATGCTGCCCTTTCCCTTCGCCTCGTCGCCTGCTC
CCCTGCCGCCGCTGCGCTGCCGTCCCTGGGCGTACGCTCTGCCCTCCCAC
TTCCCTCGTCCCCTCCCTCTGCCACACGGCCTCCTCTCCATGCCATCTGC
TACCTCTCATTTTATCGAAACGGATCCTGATTAAAAATCACACACAACTT
CCCCCCCATATACGTGTAAACGATAATTTAAACAAAGTAGCCTCCAAATG
GTATTCAACTTCGGAAAGGCCGCCAAGAGCGCCACGAAGGCAGTCAAGAA
GGCCGTCCCCAAGAAGCAGGCTGCGCCCACGAACGCGGTCGAGGGGCTCG
TGGGCTACGACATCGAGACCGGTGGCGTGCCATTCGACCCGCTCAACTTC
GGGAAGAACTGCCCCCCCCAGCAGATGCAGTGGTACCGCGCGGCGGAACT
CAAGCACGGGCGCGTCGCCATGCTCGCCGCGGCCGGGCAGATCACGCAGC
ACTTTACCCACTGGAACGATCCCTCGGGCATCTTCGACAAGACGAACTCG
GCATGGGGGGCGATGCAGCAGGTGTGCGTGCTTGGTATTGTTTTCTGACA
CTAGACGTAACTTCCTAAAATCTTGGTCCTGTGGACACAAAACCAGTTAC
ATCACTCGAAGAAAGACACTACACATAAACGTACCCACGCGTACATTCAC
GACAGTCGTCTCCTGCGGGATCTGCGCATAGTGTATACTCCGTATTTCGT
TGGCGAAGTTTTGTTGGCATTGCACACGCCGGCCTGCTTCCGAATAGGAA
AGTCGTCAGTCTCCCATGCCAGGTTCGTGGATTGGAGGGCGTGTGTCAAC
AAAAGATGTTCCTCCTGTTGAGAGTTGTGCTGCCGGCGGGTTGCCCTTGA
CGGGGCGGCTCTTCTCGTTCGATATTCCGTTTTGCAATTGCGTTCTAGCT
TGTGCTGTAGTTGAGGTAAAATCAGGTATTGACTTAACGGCAGCAGCAGC
AACTGAACTTGCGATTTGATGCCAACGGATCTGGGATGTGAGGGTGGCAA
AAATCCCCAAACTTCCGCATGAAGACGAAAAGTGTTTCGGTTCGGGTCGT
CCCTTTGCATGTATGCGAACCGGTTATGCCGCATACGCGATCGGCGTTTC
TCTCGCTGCTGAGCAGAGAACAAAACTTGAGGATGGATGCCGCGCAGAGC
AATTGCAGACCCTCAAACGTTTTGTAAGGAACTCGTCAATCAAGCCCATG
TTGTGTGGGACATCTTGCCGATCTGCGTGTGATCTCACCGACGTATGTTG
AAGGAAAGCGATCTCGAACATACGCAAGGGTTCTTCGTCGTCCGTCGTTG
GGAATGTTCTGCCCAACAAACACTCGAACCCAACGACGAGGTTGGTAGAA
ACAGCAAGGGCCCTCTTGAGTCGCGATGGCACAGCTCGCTGGGCTTCTTT
AGAGCTATTTCGTCGAAAACAAATAACTTGTCAACGCGGGGGGGTCATTT
CCTGAGTTTTTTCGCGAAGCATTTGAATGGCGAGGTGCACCGCGAAGAAG
AACAAGGTCGCCGCCCCTGCCGTTCTCAGAAACTACCCAAGACATCAAGT
AGTCAAGAGCGGACGCGGTGGAGCACTTGGATGTGCCCGTGTTTATTTTT
CCTTGGTCGAGGCGGTTGGCTGTTAGGCACGCGCACACTGACCCTGCTCT
TCGGGGTGTGCGTTCAAGAGATGATTGCTCAACCCCGCGCTTTCACGAAG
CTGTTCATGATACGGCTGCATTAAGCCTTGATTTTTGTCGAATTCCAGGC
GGCTGATTGTTGCCAAACTGGGTTTGTCCCTCCCACTGGAAACATGACAC
TTCAATGTTCAACGACCGTCTGGAGTGCCCCCAGGTCGTGTACCCCACCA
CTCGCTCAGGATAGTAGTTTGAGCTTTGACGTCAAGCTGAAGGTTGATAT
CTGACGAACAATCTGGGCAATCCAGCGCCCATGAAGTGCTGCACATGCAC
GGAAAATTCGTATTCGATGTCTCCACTTCCCCCTGGCGCATATTCACGTG
GCGGCAAAGACAGGTGTACGAGCAGCGACGATGTGGTGCGCATGCAGAAA
AGTAAACAGCTGCAACCTCACCCCCCCTTGCCGCCTCTCACCGCCGTTTT
CCCGTCCCCACCTCTCCGGCCCCCTCGGCGAATTTCCCATCGGTGGCGAG
CACAGGTGTACGAGCAGCGCCCGTTCGCCTTCGTGCAGATCATTCTGGCC
ATCTTCGCTGCCGAGGTGTACGCTAACAAGAAGTACGAGGAAACCGGCGT
CGGCGGCGACCTCGGCTTCGACCCCTTCGGGCTCAGGCCCTCCAACCCCG
AGGCGTGGGAGAGGGTGCAGCTGAGGGAGCTGAAGAACGGCCGCCTGGCC
ATGTTCGCCATCCTCGGGATGATCGTCCAGGAGCACATCACCGGCGTCGG
GGTGTTGGAGAAGGTGGACAGCCTGGCCGACTTCGCTTAACTTGACCCAG
CTCCCGCCAGTGCCGCTACTAAGAAAGATAGAGAGACCAGCTGTTCCTTT
GTCTTTCGCTTTTTTTTTTTTTCGTGGCGTCTTCGACCCCCGTCCCCCTC
CGTCCGCGAACGAGCGTGCGTTCGGTTGCTGTTTGCGCGCTCTCTCTTGC
GGGCGCGCGGCTCGCTCGCCTTCCCCCTTCCGCTCTTTTTGCCCTTCGAG
GGCGGGTGCGGTGGGGGGGTTGGGGGGTGAGCGTGTGGAACGCAGTTCTG
ACATTTAAACCTCGTCGTTTTTTCTGCCGGCGGCCCCGACGGTAGCCAGG
TTCGGGGCACGTGACAGTCTACCGACGGCGGCAGTCACGCGCCGCCCGCC
GCTCTTTTTTTTTGGGCAGTTTTGATGCTTTAGAGGTGGCTGCCAGCCTT
AACGTTGACGGCGGAGTAACGCACGTGGCAGGTATACATGTTCTAGCGCG
AGTTGGTGTGGCCCAGGTTTTTTGTTGGTTTTCTGCTGGAGGTAGTGACG
TTCATGTGTGGTAGACGGATGCTGCACGCGCGTCCCATTCCAGGCAGGCA
TGGCGCGTGCTGGGAGAAACTAGATCCGGCCTAGAAATGCGGTCGCTTGG
AAGCACCCTATGGGTGAAATGCCCGAACATGTCTGTTGTGTATGCCAGCT
GAAGATCGAGTACTGCTGCTGTAGATTTTGCCCTGGTTTGATCTGCCAGG
CAGGGGGCGAAAGATATTTAGTCTTGGAACCACACCTCGCAGAAGTCAGA
GATAGTCGGTGGAGGCACAGATCTTGACTGTGGCCAGGAGGAGTGCCTGT
CGTTTTGCTTGCTAAATGCATCATTTCTCATCCTCCGGCTGTGGTTCTTT
TCCATCCGTGTTCTCTCTCCGTCCGTCGCGAACCGAAAAACCCATTCAAA
TCATCAGTGTTCGCGTACCCGTTCCCATGGAACTTTGCCTGACCCAGCGC
GCACAGAGAGAGCAGAGCCCGTTCGTGTGTTGCGACCCTGGATGGCAAGT
TTTTGTCGTTCACTGGACAACCCTTGTTTTTGATTTACCATGACCTGCCT
GGTGCTTCTCTCCATCTCGCACGGGGTGTACTTCGTGTCGCTCGCGCGGT
CCACGGTCACACCCCGCGTTGATCGTTCATGGAAACCCTGGGTTGCTCGT
TTCACGGGATACAATGTGTTGTTGCGTTATTAATGATCATCCACGGGACA
GACGGTTCGCCTTTTTGTTTGAGCCACTCGCGGTGTTGCTCGGTTACGGG
AGAACCGACGTTTGTTCTGCGTCGCGAGGAAACGCGCAATGTTTGCGCGC
CTGCGACGACGGCCCTCCTTTTACCGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig12:1260562..1266288-

>mRNA_P-fluviatile_contig12.1407.1 ID=mRNA_P-fluviatile_contig12.1407.1|Name=mRNA_P-fluviatile_contig12.1407.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1440bp|location=Sequence derived from alignment at P-fluviatile_contig12:1260562..1266288- (Porterinema fluviatile SAG_2381)
ATGAAGTGCGCCGCAGCAGTTGCCCTTATGATGGCCTCGGCCGAGGCCTT
CGTACCGAGCACTTCGGTGCTCCCGACTTCGTCTCGCGCCACCTCGTCAT
CGAGATGAAGTGCGCCGCAGCAGTTGCCCTTATGATGGCCTCGGCCGAGG
CCTTCGTACCGAGCACTTCGGTGCTCCCGACTTCGTCTCGCGCCACCTCG
TCATCGAGCCTCCAAATGGTATTCAACTTCGGAAAGGCCGCCAAGAGCGC
CACGAAGGCAGTCAAGAAGGCCGTCCCCAAGAAGCAGGCTGCGCCCACGA
ACGCGGTCGAGGGGCTCGTGGGCTACGACATCGAGACCGGTGGCGTGCCA
TTCGACCCGCTCAACTTCGGGAAGAACTGCCCCCCCCAGCAGATGCAGTG
GTACCGCGCGGCGGAACTCAAGCACGGGCGCGTCGCCATGCTCGCCGCGG
CCGGGCAGATCACGCAGCACTTTACCCACTGGAACGATCCCTCGGGCATC
TTCGACAAGACGAACTCGGCATGGGGGGCGATGCAGCAGCCTCCAAATGG
TATTCAACTTCGGAAAGGCCGCCAAGAGCGCCACGAAGGCAGTCAAGAAG
GCCGTCCCCAAGAAGCAGGCTGCGCCCACGAACGCGGTCGAGGGGCTCGT
GGGCTACGACATCGAGACCGGTGGCGTGCCATTCGACCCGCTCAACTTCG
GGAAGAACTGCCCCCCCCAGCAGATGCAGTGGTACCGCGCGGCGGAACTC
AAGCACGGGCGCGTCGCCATGCTCGCCGCGGCCGGGCAGATCACGCAGCA
CTTTACCCACTGGAACGATCCCTCGGGCATCTTCGACAAGACGAACTCGG
CATGGGGGGCGATGCAGCAGGTGTACGAGCAGCGCCCGTTCGCCTTCGTG
CAGATCATTCTGGCCATCTTCGCTGCCGAGGTGTACGCTAACAAGAAGTA
CGAGGAAACCGGCGTCGGCGGCGACCTCGGCTTCGACCCCTTCGGGCTCA
GGCCCTCCAACCCCGAGGCGTGGGAGAGGGTGCAGCTGAGGGAGCTGAAG
AACGGCCGCCTGGCCATGTTCGCCATCCTCGGGATGATCGTCCAGGAGCA
CATCACCGGCGTCGGGGTGTTGGAGAAGGTGGACAGCCTGGCCGACTTCG
CTTAAGTGTACGAGCAGCGCCCGTTCGCCTTCGTGCAGATCATTCTGGCC
ATCTTCGCTGCCGAGGTGTACGCTAACAAGAAGTACGAGGAAACCGGCGT
CGGCGGCGACCTCGGCTTCGACCCCTTCGGGCTCAGGCCCTCCAACCCCG
AGGCGTGGGAGAGGGTGCAGCTGAGGGAGCTGAAGAACGGCCGCCTGGCC
ATGTTCGCCATCCTCGGGATGATCGTCCAGGAGCACATCACCGGCGTCGG
GGTGTTGGAGAAGGTGGACAGCCTGGCCGACTTCGCTTAA
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