mRNA_P-fluviatile_contig1.436.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.436.1
Unique NamemRNA_P-fluviatile_contig1.436.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: D8LNC5_ECTSI (Nuclear nucleic acid-binding protein C1D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC5_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 5.750e-73
Identity = 128/156 (82.05%), Postives = 139/156 (89.10%), Query Frame = 2 
Query:    5 MASSSEENKGVESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPPEQRTLKVDAEASRRFINAALSSDSVWQNAKSTDSKIAQKKRAAAGIGRSEPAGEPE 472
            MA +SEE+KGVESLKNFERALGHVRNSVRPL LMSR+EV  CVSA DRA LNLQVAYGVSSLFYMFLKTQGVSP  HPVK ELDRIRGYF RLK++ +PPEQRTLKVD +ASRRFINAALS DSVWQNAK TD K AQ+KRA+AGIGR+ PAG+PE
Sbjct:    1 MAGASEESKGVESLKNFERALGHVRNSVRPLTLMSREEVGGCVSAKDRATLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKGELDRIRGYFGRLKNVGKPPEQRTLKVDQDASRRFINAALSGDSVWQNAKGTDPKSAQQKRASAGIGRANPAGQPE 156
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: UPI001F04DAC0 (nuclear nucleic acid-binding protein C1D-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04DAC0)

HSP 1 Score: 94.0 bits (232), Expect = 7.930e-19
Identity = 45/113 (39.82%), Postives = 76/113 (67.26%), Query Frame = 2 
Query:   26 NKGVESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPPEQRTLKVDAEASRRFINAAL 364
            N+   ++K+F  + G V  ++ PL   S DE+   +   DRAKL+L V YG++++F+++L TQGV+P  H VK ELDRI+ Y  ++K +S+  ++ ++K+D +A+RRF+  AL
Sbjct:   13 NEIFSAMKDFHHSFGSVEETLEPLLRSSNDELHEKLDVLDRAKLDLMVVYGINTMFWIYLITQGVNPKEHGVKHELDRIKNYMKKVKDVSER-KKASMKIDKDAARRFVKGAL 124
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: L8HHM1_ACACA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHM1_ACACA)

HSP 1 Score: 90.9 bits (224), Expect = 1.430e-17
Identity = 42/110 (38.18%), Postives = 71/110 (64.55%), Query Frame = 2 
Query:   41 SLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPPEQRTLKVDAEASRRFINAALSS 370
            ++   E+A+  V   +      S DE+   +S  D A+L++ +AY +++LFY++LKTQGV P  HPVK E++R++ Y  +LK L+QP E  ++ +D +A+ RFI  A++S
Sbjct:   16 TISTLEKAVSDVEKHIESYLKTSVDEITNDLSTEDGARLSVLLAYALNTLFYIYLKTQGVDPADHPVKDEIERVKEYIQKLKQLTQPKETPSMVLDKQAANRFIQHAVNS 125
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: A0A8J4PQY2_9MYCE (Nuclear nucleic acid-binding protein C1D n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PQY2_9MYCE)

HSP 1 Score: 88.2 bits (217), Expect = 6.190e-17
Identity = 49/132 (37.12%), Postives = 84/132 (63.64%), Query Frame = 2 
Query:   38 ESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPPEQRT-LKVDAEASRRFINAALSSDSVWQNAKSTD-SKIAQKKR 427
            + + NFE  L  +   + P   +S  E    ++  + AKLN+ VAY ++SLF+M+L+TQGVSP  H VK EL+RI+ Y ++LKS++   E++  +++D++A++R I+  L+ +    +  S+D S  +QKKR
Sbjct:   12 QDITNFENILDKLEGQLDPFFKVSLKEHQEKLTPVESAKLNITVAYALNSLFFMYLQTQGVSPHDHQVKNELERIKPYILKLKSMTNKTEEKPKMQIDSDAAKRMIDNTLAMNKKIDSTVSSDNSSSSQKKR 143
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: R1DEY4_EMIHU (Nuclear nucleic acid-binding protein C1D n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DEY4_EMIHU)

HSP 1 Score: 87.8 bits (216), Expect = 1.280e-16
Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 2 
Query:   35 VESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPPE--QRTLKVDAEASRRFINAAL 364
              ++ NFER LG +   VR L      E+   +   + A+L+L VAY +++LFYM+LKTQG+    HPV AEL+RI+GY  ++++ SQ  E  QR   ++A A++RFI  AL
Sbjct:   20 ASAVANFERGLGDIEERVRRLQRAPWAELCGGLPPLESARLHLMVAYTINTLFYMYLKTQGIPSANHPVLAELERIKGYIRKVRAASQEAEASQRQASLNASAAKRFIVHAL 131
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: A0A7S3W1R2_EMIHU (Nuclear nucleic acid-binding protein C1D (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W1R2_EMIHU)

HSP 1 Score: 87.8 bits (216), Expect = 1.610e-16
Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 2 
Query:   35 VESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPPE--QRTLKVDAEASRRFINAAL 364
              ++ NFER LG +   VR L      E+   +   + A+L+L VAY +++LFYM+LKTQG+    HPV AEL+RI+GY  ++++ SQ  E  QR   ++A A++RFI  AL
Sbjct:   26 ASAVANFERGLGDIEERVRRLQRAPWAELCGGLPPLESARLHLMVAYTINTLFYMYLKTQGIPSANHPVLAELERIKGYIRKVRAASQEAEASQRQASLNASAAKRFIVHAL 137
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: A0A2R2MU34_LINUN (Nuclear nucleic acid-binding protein C1D n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MU34_LINUN)

HSP 1 Score: 87.8 bits (216), Expect = 2.810e-16
Identity = 47/118 (39.83%), Postives = 75/118 (63.56%), Query Frame = 2 
Query:   38 ESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPPEQRTLKVDAEASRRFINAALSSDSVWQNA 391
            + L +F+ +L  V ++++PL +   +EV   ++  D AK+NL  AY V+SLF+ +L  +G +P  HPVK ELDRIRGY  R+K + +  +++  K+D  AS+RF+ +AL     WQ A
Sbjct:   18 DQLSSFDDSLTKVEDTLKPLLMTPLNEVHEKLNPLDCAKVNLVAAYAVNSLFWTYLNVRGENPKEHPVKQELDRIRGYMNRVKEIQE--KEKAPKLDKPASKRFVKSAL-----WQAA 128
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: C1D_XENLA (Nuclear nucleic acid-binding protein C1D n=2 Tax=Xenopus TaxID=8353 RepID=C1D_XENLA)

HSP 1 Score: 86.3 bits (212), Expect = 2.920e-16
Identity = 44/109 (40.37%), Postives = 72/109 (66.06%), Query Frame = 2 
Query:   38 ESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPPEQRTLKVDAEASRRFINAAL 364
            E L  FE ++G V   ++ +  +SR E++  +   ++AKL+L  AY ++SLF+++L TQG++P  HPVK EL+RIRGY  R+K ++    ++  ++D  A+RRFI  AL
Sbjct:   17 EYLMAFENSVGSVDEMLKKMMSVSRSELLQKIEPLEQAKLDLVSAYTLNSLFWIYLTTQGINPKEHPVKEELERIRGYMNRVKEITD--RKKAARLDKGAARRFIKHAL 123
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: A0A835ZH36_9STRA (Nuclear nucleic acid-binding protein C1D (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH36_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.410e-16
Identity = 46/110 (41.82%), Postives = 70/110 (63.64%), Query Frame = 2 
Query:   35 VESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPPEQRTLKVDAEASRRFINAAL 364
            V  L N  +AL ++++ +RPL   +R+E+ + V+  + AKLN  +AYG+SSL+YM L+T+G     H VK ELDRI+G   RL+ +  P  QR + V+  A++RFI   L
Sbjct:   22 VAPLTNLHKALHNLKSKLRPLTETTREELASQVTKQEMAKLNAAMAYGISSLYYMLLRTKGCDTTDHGVKKELDRIKGAMGRLQMVKVP--QRGIVVNVAAAQRFIKHGL 129
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BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Match: A0A2D4BWA5_PYTIN (Nuclear nucleic acid-binding protein C1D n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWA5_PYTIN)

HSP 1 Score: 86.7 bits (213), Expect = 4.940e-16
Identity = 48/123 (39.02%), Postives = 78/123 (63.41%), Query Frame = 2 
Query:   35 VESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPLG---HPVKAELDRIRGYFVRLKSLSQPPEQRTLKVDAEASRRFINAALSSDSVWQNAK 394
            VE+L + ++ L  V   ++ L   S +E +  +S  ++AK+ + +AY +++L Y++LKTQGVS        VK ELDR++G+  ++K   +  +  TLK+D EAS+RFIN ALS D V+ +AK
Sbjct:    6 VEALTSVDQTLAAVEEHLQVLKNKSLEEFLAELSPIEKAKVQVSLAYSINALLYVYLKTQGVSSKDIRQTHVKQELDRVKGFIKKIKDTEELAKGPTLKLDKEASQRFINNALSGDQVYVDAK 128
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNC5_ECTSI5.750e-7382.05Nuclear nucleic acid-binding protein C1D n=1 Tax=E... [more]
UPI001F04DAC07.930e-1939.82nuclear nucleic acid-binding protein C1D-like n=1 ... [more]
L8HHM1_ACACA1.430e-1738.18Nuclear nucleic acid-binding protein C1D n=1 Tax=A... [more]
A0A8J4PQY2_9MYCE6.190e-1737.12Nuclear nucleic acid-binding protein C1D n=1 Tax=P... [more]
R1DEY4_EMIHU1.280e-1641.96Nuclear nucleic acid-binding protein C1D n=1 Tax=E... [more]
A0A7S3W1R2_EMIHU1.610e-1641.96Nuclear nucleic acid-binding protein C1D (Fragment... [more]
A0A2R2MU34_LINUN2.810e-1639.83Nuclear nucleic acid-binding protein C1D n=1 Tax=L... [more]
C1D_XENLA2.920e-1640.37Nuclear nucleic acid-binding protein C1D n=2 Tax=X... [more]
A0A835ZH36_9STRA3.410e-1641.82Nuclear nucleic acid-binding protein C1D (Fragment... [more]
A0A2D4BWA5_PYTIN4.940e-1639.02Nuclear nucleic acid-binding protein C1D n=2 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4905731..4909271 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score249.2
Seed ortholog evalue2.3e-63
Seed eggNOG ortholog2880.D8LNC5
Preferred nameC1D
KEGG koko:K12592
KEGG Pathwayko03018,map03018
GOsGO:0000176,GO:0000178,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0000972,GO:0000973,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003712,GO:0003714,GO:0003723,GO:0003725,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006996,GO:0008134,GO:0008150,GO:0008152,GO:0008298,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016075,GO:0016078,GO:0016180,GO:0016922,GO:0017053,GO:0019219,GO:0019222,GO:0019439,GO:0022613,GO:0030234,GO:0031123,GO:0031125,GO:0031126,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032069,GO:0032991,GO:0033036,GO:0034470,GO:0034472,GO:0034475,GO:0034476,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0035257,GO:0042254,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051252,GO:0051253,GO:0051276,GO:0051336,GO:0051427,GO:0051641,GO:0060255,GO:0060700,GO:0065007,GO:0065009,GO:0070013,GO:0070651,GO:0070727,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071033,GO:0071034,GO:0071035,GO:0071038,GO:0071039,GO:0071042,GO:0071043,GO:0071046,GO:0071047,GO:0071051,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098772,GO:0140110,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901917,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905354,GO:1905777,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.maturation of 5.8S rRNA
EggNOG OGsKOG4835@1,KOG4835@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionExosome-associated factor Rrp47/DNA strand repair C1D
Ec32 orthologEc-04_004370.1
Exons4
Model size1823
Cds size864
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.436.1prot_P-fluviatile_contig1.436.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 4905735..4908316 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815335.1895306-UTR-P-fluviatile_contig1:4905730..49057341622815335.1895306-UTR-P-fluviatile_contig1:4905730..4905734Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4905731..4905734 +
1693561535.5469298-UTR-P-fluviatile_contig1:4905730..49057341693561535.5469298-UTR-P-fluviatile_contig1:4905730..4905734Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4905731..4905734 +
1622815335.445895-UTR-P-fluviatile_contig1:4908316..49092711622815335.445895-UTR-P-fluviatile_contig1:4908316..4909271Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4908317..4909271 +
1693561538.8143086-UTR-P-fluviatile_contig1:4908316..49092711693561538.8143086-UTR-P-fluviatile_contig1:4908316..4909271Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4908317..4909271 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815335.2006817-CDS-P-fluviatile_contig1:4905734..49058141622815335.2006817-CDS-P-fluviatile_contig1:4905734..4905814Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4905735..4905814 +
1693561535.5594227-CDS-P-fluviatile_contig1:4905734..49058141693561535.5594227-CDS-P-fluviatile_contig1:4905734..4905814Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4905735..4905814 +
1622815335.2140508-CDS-P-fluviatile_contig1:4906630..49067121622815335.2140508-CDS-P-fluviatile_contig1:4906630..4906712Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4906631..4906712 +
1693561537.136992-CDS-P-fluviatile_contig1:4906630..49067121693561537.136992-CDS-P-fluviatile_contig1:4906630..4906712Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4906631..4906712 +
1622815335.2238739-CDS-P-fluviatile_contig1:4907231..49073291622815335.2238739-CDS-P-fluviatile_contig1:4907231..4907329Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4907232..4907329 +
1693561538.776824-CDS-P-fluviatile_contig1:4907231..49073291693561538.776824-CDS-P-fluviatile_contig1:4907231..4907329Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4907232..4907329 +
1622815335.4005957-CDS-P-fluviatile_contig1:4907712..49083161622815335.4005957-CDS-P-fluviatile_contig1:4907712..4908316Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4907713..4908316 +
1693561538.7943609-CDS-P-fluviatile_contig1:4907712..49083161693561538.7943609-CDS-P-fluviatile_contig1:4907712..4908316Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4907713..4908316 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.436.1

>prot_P-fluviatile_contig1.436.1 ID=prot_P-fluviatile_contig1.436.1|Name=mRNA_P-fluviatile_contig1.436.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=288bp
MASSSEENKGVESLKNFERALGHVRNSVRPLALMSRDEVVTCVSAADRAK
LNLQVAYGVSSLFYMFLKTQGVSPLGHPVKAELDRIRGYFVRLKSLSQPP
EQRTLKVDAEASRRFINAALSSDSVWQNAKSTDSKIAQKKRAAAGIGRSE
PAGEPEKIHKPKAASAAVAAGGAPAESAGVSGRSNSSGGGGSASGKRKHA
AADGSAGDSSSPAAGGWTAVEKRRSGGGERVIKRSEAGLAATHKAVSPQR
EDGPDAAAPGESLRATKKAKGTTGSGTNKKTARYHVW*
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mRNA from alignment at P-fluviatile_contig1:4905731..4909271+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.436.1 ID=mRNA_P-fluviatile_contig1.436.1|Name=mRNA_P-fluviatile_contig1.436.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3541bp|location=Sequence derived from alignment at P-fluviatile_contig1:4905731..4909271+ (Porterinema fluviatile SAG_2381)
AACCATGGCGAGTTCTAGCGAGGAAAATAAAGGCGTGGAGTCTCTGAAGA
ACTTCGAACGAGCTCTTGGGCATGTGCGCAACAGGTGACCAGTGTGCGTT
CAAAATGACTGTCGTTGGTTTTGGTTCAAAGGAGGATCCTGGTCTGCGTC
CAAACTCTGCTTGCTCTACATTCCTGGAGCTGATAGGTTAGAAAGTAGCA
CGAAGGAGACGCTGCCGCAGGCTTGGTTAACCCGCGCGTTCCATTTGTGC
GAGGAAAGTGGTACAAATGCTTGTTTTCATGCGAAAGTCGTTTCCGTTTG
ATTCACGCGCATATGCACAACCACAGAAACCCACGACCATCTCCCTCCCT
TGGGCAAGATGGTGTACCCCAGCGACGCGTCGCATCTAACCCCCTGTGTA
TCAACCTTGGCGATGCCGTAGAGCACATTTACGGACAGGACGAAATCTGT
ATCACCAATTGGAGGCAATGTTCGCTTGTCAAGTTATCGACGTGCAGCAG
CAACAGCAGCTGCTGTCGTAGAGAGTTGGGTCTCGTAGCAATCCATCCGA
GGTGAAACACAAAGCATAAGGGTCGCGGCTCTTCCTCTCTGTGCCCCCGG
ATGCGTCGCCGTGCACGAAGAAGTCAACCCGGTAGTAGGAAGGTGCCTCT
GCCGACGATATTTTGGTAGTTAATGCCTCTGTGTCTCTCTCGGCCAAACT
ACTTTAGGGACATGTTTCGTTTCTTTTCCTTTCCTTCCGCTCTCAGCCCC
CGAACTCAGTTGCTGCCTCTTCCCTCTGCCTTCCCGACCCCCTAACGCTC
CGGGTGTGCTTATCGCTACCGCCCCCTCCACTCGTCGACACACCCTATTT
CACCGCCCGCGTGCGTCCGTAAAAAACGGAACGAAACGATGCATTCAAAG
CGTGCGACCGCTGGCGCTCATGAGCCGGGACGAGGTCGTGACTTGCGTGA
GCGCTGCTGATCGTGCCAAGCTCAACCTGCAGGTGGGTGCCGTACGGTAC
TATAACAGCAGCAGCTGCTGCTGCCATGCTATATGCCGGTAACAACAGGT
GGTGTTGGGCGCATCAGGCAATATTGTTGTCAGATCGCCCGTCGCTCGTG
TTGAGTTGCGCGTCGCCCGGATGAGTTTTCATATCATACTCGGGAGAATG
GCGTCAAGTCGGCCAGATTCTGTCCCACCCTGCAACAAGACGCATCAAGG
ATGAAACAAAACAAAGCCAAGCTCCGCATGCACCGCCGTTGCAAGGATTT
TTTGGCGCACATGCGCCCACGAATGGCGATGACCCATGGGACGGGTGTCA
CTGCCCGTGTTGTCTCTAACCTCGAATTCAACGAAGGCATCTTGATCGAC
TTCCCAACGTGCACACGCTTCGCCAGTCACACTCCAACCACAACCGTGTG
CTTCGCACGATTATGGCTGATGTCGTAGCTCAAAAAGACGACGTACAAGC
AACCTAGGGTGATTATCATTTTTACACGACCGACTGACACTGCTGTTGCA
GGTGGCCTACGGCGTGAGCTCCCTCTTCTACATGTTCCTGAAGACGCAGG
GGGTGTCACCCTTGGGCCACCCGGTCAAGGCCGAGCTCGACCGTATACGG
TGAGGGAGCAGAAAAGAACCGTCAGAGGCGGTAGGAGAGATATACAGAGA
GCTCGTGGATTTACACGAGGAGGCTTTTTGTTTTTGAACGTTCATGCGCC
AAGAAGCGAGAGAGCGAAATGCTCCTTGCGGTTAAACAAGTCACCACCAG
AGCGCGACCGCGAGAAACAAGCTGAACCTTTTGAAGCGACAAAAAGTAGC
CAGCTGTATGTCATCGCATATGCATCCGCCCTCCAGCTCCCGTCGTGCCT
GGCCATCTTACCCACCACCCATATCCTCTATCTTTGCTTGCTCCTTTGTT
TTTTTTGTTTCTTGTTGCACCTTGTGTTGTGCGTGCTGCTACCACCCTGC
TCGGTGCTTGCCTGGCAACGGCGGAATGCCAGCGGCTACTTCGTGCGCCT
GAAGAGTTTAAGTCAGCCGCCGGAGCAGCGCACCCTCAAGGTGGACGCTG
AGGCCAGCCGGCGCTTCATCAACGCCGCGCTCTCGAGCGACAGCGTCTGG
CAGAACGCCAAGTCCACGGACTCGAAGATCGCGCAGAAGAAGCGCGCCGC
CGCTGGCATCGGCCGGAGCGAACCTGCCGGAGAGCCTGAGAAGATACACA
AGCCGAAGGCAGCCTCAGCGGCGGTGGCGGCGGGAGGAGCACCAGCAGAA
TCAGCAGGAGTCAGCGGCCGCAGCAACAGTAGTGGCGGCGGCGGCAGCGC
CAGTGGCAAGCGGAAACACGCCGCGGCCGATGGTAGCGCCGGTGATTCGT
CGAGTCCCGCCGCGGGGGGATGGACGGCGGTGGAGAAGCGAAGGAGCGGC
GGCGGCGAACGAGTAATCAAGAGAAGCGAGGCCGGGCTTGCAGCGACTCA
TAAGGCGGTGTCACCGCAGCGGGAAGACGGGCCGGACGCGGCGGCGCCCG
GGGAATCGCTGCGCGCCACGAAGAAGGCCAAGGGCACTACTGGTTCCGGG
ACGAACAAGAAAACCGCGCGATATCACGTTTGGTAGAGGCATTTCGTGGT
GTTCCATTCGGCTGCCTTTTAGCGCGCTGTTGGTTTGGAGTATTGAAACT
TGTGTCGGAAGGTTCGGCCAAACGTGAGTGCTGTTTTTTGGTGATCATCA
GATGGAGAGAGGAAGGTTAAGTACGGAAAGCATCTATACGGAAGAAGTGC
GTACAGCCCACCCATTATCCCATGGCCCACCCACTCCCCGAAGTGGAGGA
GGTGATCGCAGGGACTAAAGGAAGCAGCAACGTTCGCCTCCGTCCGCACC
TTGAAGGGTTTCCGACTTACTGTCCGCCGGTGGGAGTGCGGCAACAGTTG
GGTTGTTCAGATCCAGCGCATCGGCTTGGGGTCGCACAATGCGTCGGGTA
AGTTTGCTCTCCCTTGTCCCTTTGGCACCCGGACTTCATGTTACTCAACA
CTTTTGTCCGGGGGGCGAACGACCACCATCTCACAAGAGGCGGCCAAACT
ATTCGCTGCCCCGGAGGTAAGTGCTTAAAAAAGGGAAGTCTTGGGATCAC
AACGACACGGGGCAGACCCTCCCGAGGCTTGCCACCTCGCCCAGCCGATG
GACGTGGATCTCAACGGCCCAGCTTTTTTTCATCCTCCAACGTGCTTGGA
TACAAGATCTGCTGCTTTTTTTTTGCTCCTGCGCAGCTCCTCTCGGGAGG
CCGACGAGGAGGGCGCGGTGTGGTGACGACGGCCGGGGGTTGGTATTTTG
TCTTGCGGCGTTTTCGTGCCTTGTTTCCCCACTCGCCGGCTAGACTGCCT
ACGTCGTCGACGCTGCCGGGCGGTGCAGTGGAGCCCGCCGTTGGCATTGC
GACCACCGTCGACTTCGTTGGTGCCTTTGATATTGCTGTTGCTGTTGCTG
TTGTCATCGTATTGTCGTTTCCTCTTGTCGATGATGATACTCGACGAACA
TAGATTTCCGTGAAACGCGAGTCCGGTGTTTTTCGGGGAGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:4905731..4909271+

>mRNA_P-fluviatile_contig1.436.1 ID=mRNA_P-fluviatile_contig1.436.1|Name=mRNA_P-fluviatile_contig1.436.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1728bp|location=Sequence derived from alignment at P-fluviatile_contig1:4905731..4909271+ (Porterinema fluviatile SAG_2381)
ATGGCGAGTTCTAGCGAGGAAAATAAAGGCGTGGAGTCTCTGAAGAACTT
CGAACGAGCTCTTGGGCATGTGCGCAACAGATGGCGAGTTCTAGCGAGGA
AAATAAAGGCGTGGAGTCTCTGAAGAACTTCGAACGAGCTCTTGGGCATG
TGCGCAACAGCGTGCGACCGCTGGCGCTCATGAGCCGGGACGAGGTCGTG
ACTTGCGTGAGCGCTGCTGATCGTGCCAAGCTCAACCTGCAGCGTGCGAC
CGCTGGCGCTCATGAGCCGGGACGAGGTCGTGACTTGCGTGAGCGCTGCT
GATCGTGCCAAGCTCAACCTGCAGGTGGCCTACGGCGTGAGCTCCCTCTT
CTACATGTTCCTGAAGACGCAGGGGGTGTCACCCTTGGGCCACCCGGTCA
AGGCCGAGCTCGACCGTATACGGTGGCCTACGGCGTGAGCTCCCTCTTCT
ACATGTTCCTGAAGACGCAGGGGGTGTCACCCTTGGGCCACCCGGTCAAG
GCCGAGCTCGACCGTATACGCGGCTACTTCGTGCGCCTGAAGAGTTTAAG
TCAGCCGCCGGAGCAGCGCACCCTCAAGGTGGACGCTGAGGCCAGCCGGC
GCTTCATCAACGCCGCGCTCTCGAGCGACAGCGTCTGGCAGAACGCCAAG
TCCACGGACTCGAAGATCGCGCAGAAGAAGCGCGCCGCCGCTGGCATCGG
CCGGAGCGAACCTGCCGGAGAGCCTGAGAAGATACACAAGCCGAAGGCAG
CCTCAGCGGCGGTGGCGGCGGGAGGAGCACCAGCAGAATCAGCAGGAGTC
AGCGGCCGCAGCAACAGTAGTGGCGGCGGCGGCAGCGCCAGTGGCAAGCG
GAAACACGCCGCGGCCGATGGTAGCGCCGGTGATTCGTCGAGTCCCGCCG
CGGGGGGATGGACGGCGGTGGAGAAGCGAAGGAGCGGCGGCGGCGAACGA
GTAATCAAGAGAAGCGAGGCCGGGCTTGCAGCGACTCATAAGGCGGTGTC
ACCGCAGCGGGAAGACGGGCCGGACGCGGCGGCGCCCGGGGAATCGCTGC
GCGCCACGAAGAAGGCCAAGGGCACTACTGGTTCCGGGACGAACAAGAAA
ACCGCGCGATATCACGTTTGGTAGCGGCTACTTCGTGCGCCTGAAGAGTT
TAAGTCAGCCGCCGGAGCAGCGCACCCTCAAGGTGGACGCTGAGGCCAGC
CGGCGCTTCATCAACGCCGCGCTCTCGAGCGACAGCGTCTGGCAGAACGC
CAAGTCCACGGACTCGAAGATCGCGCAGAAGAAGCGCGCCGCCGCTGGCA
TCGGCCGGAGCGAACCTGCCGGAGAGCCTGAGAAGATACACAAGCCGAAG
GCAGCCTCAGCGGCGGTGGCGGCGGGAGGAGCACCAGCAGAATCAGCAGG
AGTCAGCGGCCGCAGCAACAGTAGTGGCGGCGGCGGCAGCGCCAGTGGCA
AGCGGAAACACGCCGCGGCCGATGGTAGCGCCGGTGATTCGTCGAGTCCC
GCCGCGGGGGGATGGACGGCGGTGGAGAAGCGAAGGAGCGGCGGCGGCGA
ACGAGTAATCAAGAGAAGCGAGGCCGGGCTTGCAGCGACTCATAAGGCGG
TGTCACCGCAGCGGGAAGACGGGCCGGACGCGGCGGCGCCCGGGGAATCG
CTGCGCGCCACGAAGAAGGCCAAGGGCACTACTGGTTCCGGGACGAACAA
GAAAACCGCGCGATATCACGTTTGGTAG
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