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Homology
BLAST of mRNA_P-lacustris_contig1025.316.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI) HSP 1 Score: 597 bits (1539), Expect = 3.320e-186 Identity = 403/504 (79.96%), Postives = 437/504 (86.71%), Query Frame = 2
Query: 2867 RYMAIVEAANVRSALDNSSTSENTDASPSEDDGGMMAEILTDRLMEVCSKMEQVVTSPEDELSDGPADSVAVGGGSGVHKRRPSSRRRQHSNMSSRTLHSTVG-DIEENDADSDEGSTVDAGAAARKLRRERLRKRTKQSRKLSSVLAVPKDDRGEVINLHTAAYNGEREGLTAYIAQGGDLEVRDKFQATALMLCTERGHNDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDPNIRRVLRNEEFVRYSGENFDLLAAVEVNDTTALANFIAMGQEACGFPHNPNAVAVAAKRLRLDRVGRGGMSAAHLAAFHGYADSLCLLLEAGADANAVCDDGETPLHTACNGGSLLCASLLLDHGANPLATDGKGLVPCEKHIAGGRQEMKQLLESKAFQATPANLLSLRSDLAAVALQIDAEEDLFVRKGVAIKYLRRALKKKDXXXXXXXXXXXXXXXXXXXXADRMEGVHRLLKGI 4375
RYMAIVEAANV+SALDNSSTSE+TD SPSEDDGGMMAEILTDRLMEVCSKMEQ SPE +LSDG A+++A+GGG GVHKRRPS RRRQ SNMS+RTLHS G + EE DADSDEGS +DAGAAARKLRRERLRKR KQSRK+SSVLAVPKDDRGEVI++HTAAYNG+++ L AYI+QGGDLE+RD+FQATALMLC ERGH M XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATDP IRR+LR E+ VR+SGENFDLL AVEVNDT A+ANFIAMGQEACG+PHNPNAVAVA+KRLRL+R GRGGMSA HLAAFHGYADSL LLLEAG+D NAV DDGETPLHTACNGGS+L CEKHIAGGRQEMK LLE+KAFQATPANLL+LR+DLA VALQIDAEEDLFVRKGVAIKYLR+ALKKKD XXXXXXXXXXXXXXX ADRME VH+LLKG+
Sbjct: 662 RYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMALGGG-GVHKRRPS-RRRQLSNMSNRTLHSVAGGEGEEEDADSDEGSVMDAGAAARKLRRERLRKRAKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYISQGGDLEIRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRILRIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSILXXXXXXXXXXXXXXXXXXXXXXCEKHIAGGRQEMKHLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDVDLGXXXXXXXXXXXXXXXLADRMESVHKLLKGV 1163
BLAST of mRNA_P-lacustris_contig1025.316.1 vs. uniprot
Match: D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 1.340e-10 Identity = 113/313 (36.10%), Postives = 157/313 (50.16%), Query Frame = 2
Query: 3335 INLHTAAYNGEREGLTAYIAQGGDLEVRDKFQATALMLCTERGHNDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDPNIRRVLRNEEFVRYSGENFDLLAAVEVNDTTALANFIAMGQEACGFPHNPNAVAVAAKRLRLDRVGRGGMSAAHLAAFHGYADSLCLLLEAGADANAVCDDGETPLHTACNGGSLLCASLLLDHGANPLATDGKGLVPCEKHIAGGRQEMKQLLESKAFQATPANLLSLRSDLAAVALQIDAEEDLFVRKGVAIKYLRRALKKKD 4273
++ H AAY G+ L Y GGDLE RD ++AT L+L E+GH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ I +L +E G D++ AVE ND L +FI+ + L++ G+ M+ H+A+F+G D + +LL+ G G P E+ ++QLLE++++++ P N+ +R A+ L++D E +FV+K +AIK LR A++ KD
Sbjct: 66 VHAHVAAYEGDLGKLRRYSEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLG--VDVIEAVERNDVAGLKSFISGKGD-------------------LNQKGKNDMTPLHVASFNGRTDIVRMLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPAERSTG---TSVQQLLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKD 354
BLAST of mRNA_P-lacustris_contig1025.316.1 vs. uniprot
Match: B8AI94_ORYSI (Uncharacterized protein n=2 Tax=Oryza sativa TaxID=4530 RepID=B8AI94_ORYSI) HSP 1 Score: 61.2 bits (147), Expect = 6.140e-6 Identity = 41/101 (40.59%), Postives = 53/101 (52.48%), Query Frame = 2
Query: 3842 LDRVGRGGMSAAHLAAFHGYADSLC--LLLEAGADANAVCDDGETPLHTACNGGSLLCASLLLDHGANPLATDGKGLVPCEKHIAGGRQEMKQLLESKAFQ 4138
++ V GG A HLAA G ++C L+ E DANA+ D GETPL A NG ++ LLDHGA+P D KG P G + +LL +K Q
Sbjct: 63 VEAVREGGAGALHLAAGAGKL-AVCRYLVEELRVDANAIYDQGETPLAYAVNGANVATVRYLLDHGAHPEKADNKGFTPLHFAAEEGYCNVVELLLAKGAQ 162
BLAST of mRNA_P-lacustris_contig1025.316.1 vs. uniprot
Match: I1P0K6_ORYGL (Uncharacterized protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1P0K6_ORYGL) HSP 1 Score: 57.8 bits (138), Expect = 3.650e-5 Identity = 40/101 (39.60%), Postives = 52/101 (51.49%), Query Frame = 2
Query: 3842 LDRVGRGGMSAAHLAAFHGYADSLC--LLLEAGADANAVCDDGETPLHTACNGGSLLCASLLLDHGANPLATDGKGLVPCEKHIAGGRQEMKQLLESKAFQ 4138
++ V G A HLAA G ++C L+ E DANA+ D GETPL A NG ++ LLDHGA+P D KG P G + +LL +K Q
Sbjct: 63 VEAVRECGAGALHLAAGTGKL-AVCRYLVEELRVDANAIYDQGETPLAYAVNGANVATVRYLLDHGAHPEKADNKGFTPLHFAAEEGYCNVVELLLAKGAQ 162
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 601.7 |
| Seed ortholog evalue | 4e-169 |
| Seed eggNOG ortholog | 2880.D8LK98 |
| KEGG ko | ko:K21411 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-16_002610.1 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03400 |
| Exons | 9 |
| Model size | 4790 |
| Cds size | 1875 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815296.9817095-UTR-P-lacustris_contig1025:5137..5718 | 1622815296.9817095-UTR-P-lacustris_contig1025:5137..5718 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1025 5138..5718 + |
| 1693493458.478506-UTR-P-lacustris_contig1025:5137..5718 | 1693493458.478506-UTR-P-lacustris_contig1025:5137..5718 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1025 5138..5718 + |
| 1622815296.9929767-UTR-P-lacustris_contig1025:6572..6960 | 1622815296.9929767-UTR-P-lacustris_contig1025:6572..6960 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1025 6573..6960 + |
| 1693493458.4886596-UTR-P-lacustris_contig1025:6572..6960 | 1693493458.4886596-UTR-P-lacustris_contig1025:6572..6960 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1025 6573..6960 + |
| 1622815297.0103936-UTR-P-lacustris_contig1025:8980..10523 | 1622815297.0103936-UTR-P-lacustris_contig1025:8980..10523 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1025 8981..10523 + |
| 1693493458.5045388-UTR-P-lacustris_contig1025:8980..10523 | 1693493458.5045388-UTR-P-lacustris_contig1025:8980..10523 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1025 8981..10523 + |
| 1622815297.0970933-UTR-P-lacustris_contig1025:14822..15225 | 1622815297.0970933-UTR-P-lacustris_contig1025:14822..15225 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1025 14823..15225 + |
| 1693493458.5811017-UTR-P-lacustris_contig1025:14822..15225 | 1693493458.5811017-UTR-P-lacustris_contig1025:14822..15225 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1025 14823..15225 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815297.0272346-CDS-P-lacustris_contig1025:10523..11269 | 1622815297.0272346-CDS-P-lacustris_contig1025:10523..11269 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 10524..11269 + |
| 1693493458.5137112-CDS-P-lacustris_contig1025:10523..11269 | 1693493458.5137112-CDS-P-lacustris_contig1025:10523..11269 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 10524..11269 + |
| 1622815297.0383637-CDS-P-lacustris_contig1025:11796..11950 | 1622815297.0383637-CDS-P-lacustris_contig1025:11796..11950 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 11797..11950 + |
| 1693493458.522588-CDS-P-lacustris_contig1025:11796..11950 | 1693493458.522588-CDS-P-lacustris_contig1025:11796..11950 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 11797..11950 + |
| 1622815297.0489469-CDS-P-lacustris_contig1025:12257..12455 | 1622815297.0489469-CDS-P-lacustris_contig1025:12257..12455 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 12258..12455 + |
| 1693493458.5311265-CDS-P-lacustris_contig1025:12257..12455 | 1693493458.5311265-CDS-P-lacustris_contig1025:12257..12455 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 12258..12455 + |
| 1622815297.0578253-CDS-P-lacustris_contig1025:12904..13045 | 1622815297.0578253-CDS-P-lacustris_contig1025:12904..13045 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 12905..13045 + |
| 1693493458.5444503-CDS-P-lacustris_contig1025:12904..13045 | 1693493458.5444503-CDS-P-lacustris_contig1025:12904..13045 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 12905..13045 + |
| 1622815297.0687187-CDS-P-lacustris_contig1025:13436..13716 | 1622815297.0687187-CDS-P-lacustris_contig1025:13436..13716 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 13437..13716 + |
| 1693493458.5526965-CDS-P-lacustris_contig1025:13436..13716 | 1693493458.5526965-CDS-P-lacustris_contig1025:13436..13716 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 13437..13716 + |
| 1622815297.0791755-CDS-P-lacustris_contig1025:14110..14218 | 1622815297.0791755-CDS-P-lacustris_contig1025:14110..14218 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 14111..14218 + |
| 1693493458.5645442-CDS-P-lacustris_contig1025:14110..14218 | 1693493458.5645442-CDS-P-lacustris_contig1025:14110..14218 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 14111..14218 + |
| 1622815297.088113-CDS-P-lacustris_contig1025:14574..14822 | 1622815297.088113-CDS-P-lacustris_contig1025:14574..14822 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 14575..14822 + |
| 1693493458.5734894-CDS-P-lacustris_contig1025:14574..14822 | 1693493458.5734894-CDS-P-lacustris_contig1025:14574..14822 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1025 14575..14822 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1025.316.1 >prot_P-lacustris_contig1025.316.1 ID=prot_P-lacustris_contig1025.316.1|Name=mRNA_P-lacustris_contig1025.316.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=625bp
MAMRRARGAPSPADEDVKDEEEEKKSEDESDMDSDASSSKGGAGNYAYFS PVKPLAVVKAASPRPPPRYLATTKTSKTSTSTHSVDVAPQELQQPRQSPR QAAPSPTPLPPPPPPPPPRYMAIVEAANVRSALDNSSTSENTDASPSEDD GGMMAEILTDRLMEVCSKMEQVVTSPEDELSDGPADSVAVGGGSGVHKRR PSSRRRQHSNMSSRTLHSTVGDIEENDADSDEGSTVDAGAAARKLRRERL RKRTKQSRKLSSVLAVPKDDRGEVINLHTAAYNGEREGLTAYIAQGGDLE VRDKFQATALMLCTERGHNDMVEALVSAGAEASCVDENGNSALHLACFYG NLEAVELLLAVDADIAAVDSEGRTPLNLATDPNIRRVLRNEEFVRYSGEN FDLLAAVEVNDTTALANFIAMGQEACGFPHNPNAVAVAAKRLRLDRVGRG GMSAAHLAAFHGYADSLCLLLEAGADANAVCDDGETPLHTACNGGSLLCA SLLLDHGANPLATDGKGLVPCEKHIAGGRQEMKQLLESKAFQATPANLLS LRSDLAAVALQIDAEEDLFVRKGVAIKYLRRALKKKDVDIARLRQAVEAR DTDIRNLADRMEGVHRLLKGIYSQ* back to topmRNA from alignment at P-lacustris_contig1025:5138..15225+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig1025.316.1 ID=mRNA_P-lacustris_contig1025.316.1|Name=mRNA_P-lacustris_contig1025.316.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10088bp|location=Sequence derived from alignment at P-lacustris_contig1025:5138..15225+ (Pleurocladia lacustris SAG_25_93) CACGCAACAACCAAAAAACGCACACCAGCGACGGCCATCTTAGGCCCACT
GCCATACGTGCGGGTTGTGACAGCGTGTGACTTGTTAGTTGATGCATCGG
GCTTTGCCGCGATTTCGACTGTAGCACTTGGAGAGAGGGATTGAAGCAGG
CTCAGCAGCAACGGTGTGTGAAACGAAGGCCTCCCTGTCCTAGCGTTCCG
GGAGACCCACACACGCTCACCTCGGGTGCGGGTACGGGGGCTATCAAGGA
CAGCCCTTGGGGTTGGTGATCGAAGCCTCGCGTTCGGTGAAGACATGGCG
CCGGCTGTGGGTGCCAGGCGGAGCTGGGGTAAGAGATCGTTGGGTGGGAC
GTGTAAGGCGGCTACCACTGCTGGGAAGGCGATGACAGCAGATAAAGTTA
GTAAACGCTCGTCACCCAATCAGGACCAAGCTGGATACGTTTGGAATGGT
GAGGCGCAGACTTCGGCGCGGTCGACGAGCGCTGATCCACATGCTGGGGT
TAGTGTTGGCAGGCAGCAGCGTGCGGGTGGCAGCGGTCCATTTGGAGCCG
GGGTAGAGGAGCGAAGCCATCCACCGCCAAGGCAAGAAAGCTTTCCATTT
ACAACTTGTACTACAGCAGTATTGTTTTTGTTGGATGCCTATCTCGAGAA
GAAGTTAAAAAGTTTTAGTCACACAGCTCTAGGACGGTTGAAAAAGGACA
CACTTTGGATTTTGGTCGGAGAGCTTTTAATTGAACTACCCGTTACCAAG
CTGCTGAACAAAGTTTCAGCTGTTGCCTGCGCTCGTCTCCCCAGAGTTTG
TATTAGACCGAAGGACGCTTGTTGTGGCTGCCAGGAGCGGTTGCCACACA
TTTACTTTACAACTACTGCTGTGGCACACACACACAGCAACAATGCATGC
TGTTTTTGTGCGTCCATTTTTTTTTTTAATATGTCTGCAATTTGCGTGCT
TGCATATGCCTCACGCTGCAACCGGATGAACGACGAGCCATCATCAGCCT
TTTGATTTGTCTCTGTGTGTGCGGAGTACGTGAGCTGAAGTACGTTCGCG
GAAGCGTGTTTCGTATTGAAACGACAGCGGTAAGTAGCAGCAGCTGGCAC
CGTCCACCTTCGGCGCGGAGTAACATGTGCGTTCGATTTCGAACATTTCG
CCTGCTGAGCAATATTTTACTCGGAAGACGCCTGCTGGGCAATATCTCAA
CTCGGAAGATCAACAGACTACTTGGAACCATTCGAGCCGGAGTGACCCAG
TCCCCACACAGGACCAATCTCTCTCTCTCTTGCATTGTTCGTGATCTACG
ACGGCCCTAAGATCTTTGCGAGAGAAGCGCGCGGCTGTGGGTTCTTTCCG
ATCCCTCTCCAGGTCCCCTTTACGTCTCCTCTTGTTAGCTCTAAAGAACG
CACATCATCTCCCAAACGACCACCTCAATTTCCAGGTATTCCTCGCTCGA
CACCACCTCTGTCGCAAGAACGGGTGACGGTGAATCCGGGGGGACTTCAC
CCTCCATCGCCACCAACGATACGAACAGTAGCTCGACCGGCCCGACGCTG
CGATTCGGAGGCCGTGCTAGCACTTCTCGTGGGGGGTCGGACTTTCCTCG
CTCTGACAGCCAACTCCAGCTGCAGCAGGCGCGGGCGGCCAGGCACGCAG
CAGCAGTGGCGGCCAGGATCCCACAAGTTTACAATCCGACGGCCAACGCT
TCGCTTGGGGTAACGGGGGCGGACTCGGGCTCGTGTGGGGACTTGTCTTC
GAAGCAGAGATCTCACCGCGGGGGCAAGAGGGAGGGCGAGCATCAGAGGG
CGCAGTATTCCCAGGACGTTCCGGTGGGTCGTTTGTCTGGGGTTGTGTTT
GTGTTTGTGGGTGGTCTATTTCGTGCGCGTGTGTGCGCGCTTCGAATCGT
TCGTTCGCGCGAAGCAGAGCTTGGTTCACGAAACGTGTGCAACGTGCACC
GCGTATACCGCTCAGCGCGTTTTTGCGTGTGCTGCACGGTCGCGTGGAGT
CACCAGAGGAAAAGAAAATCATATAGTACAGCAGTCGGTACAAGTAGTTC
AAAACGAAACCATTTCCGTGTGGTGCATACCGAAATGATTAACTCCGCCC
CGCCGTTGGGGAATAAATGAATACGGAGTAATAGATAGCACGTGTGGCGC
CTTCTTCTGTACAAGTAGTGCAATTGGTTCATTTGTGTCGAAGATGTTAC
GGCTTCTGCATCGGGCGGCGTCTTTTCCGTCTCGTCTCAACACCTCTCTC
CGGACATGTTCCGCCCTGCGATGATGCTGCTGGTCGCGGATGATGGTGGT
GGCTTGGATGTAGGCACAGCAAGAATTTTTTTTTTTCCAGCTTTTATTCT
TGTTCGACCCATCCTCCTCCATTCCCTTCCCTACGAAGGAATGGTTGCTC
TGGCGTGGACCACCACGAAAGGGACTTGCCCGTGTCAGTTCGATGCCTCC
AGACCAATCATTGTGGTGGCGATGGCATGTAGTGCCGTATGAAATACATA
CTCGAAAGCAGCGCAGCGGTACCGAGCTGCCGGGACGCCTCTTGCAACAA
GTAATTATCCCGTGTAGAAATCCGTTTACCCCTTTCCAGCTTCGAACCTT
TTAATTCCGCGCACATGCTTTGATTGTTTTTGTGGACGCCTGCTCACCTC
ACTCCCATAGAATGGAAGGGAGTTGACGCAGCGATCGTTGGAGAAACGTA
CCCGCAAGCACGTCGATACACGAAAACATATACTATCCGATTTCTAGATG
TTGTGCCTGCTGTGCATGTTTGTGCCGGAATTTAAGCGGTAGAAAAGGGT
TCAGAAAAGCGTTTCTGCATAAATTTAGCAGCAGCAGTAGTGGCGAACGT
TGCCCTGTGAGTGACGTTTTTTGTTCCATCTTTCCTCGCCAATAGGTTTG
TCGGAACGTTTTTTTTTAGTGAAGTAACTCCTTCAGCCTGTTGTAGCCTC
ACGGCTCAAGCAAATGTGCGAACACGGCCCGCGCTGTTAGTTTAGTGTAT
TATTTAGAAACGTCCTGTGCCGTCCTTTTATGCCTTGGCCATTAGGTTAG
GATTGGAAAGTTCGTATTTTTCGATGTGCCGGTCAACGAGCGTCCCGCCA
ACAAAGTTGCTCTGATGAACGAAGTAGATCCGCCAGCCGACCAAATTTAT
GAAAATGCCGCCGCCGCCGCCGCTGCTGGTAGTTGACACCTCCTTCGGTG
TATCCCCACGGAAGATGTTTGACGCCGTCTACCCAGGTTCATGAGTCATG
GGCACGGGTTTGTTGCTCTTGCTACGCCCGCTTCCCAAAAGGATGAGCAT
GTGGTAGTAAACTTGTGTCATGATAGTTCGAACCATTGCTTTTTTCGTGT
GTAGGGAAAAAGAAGAAAAAGCGTAGTCTCGCCTGTCACGATCGAGAGGG
TGTAATTTATGTTTCAAGCAATGGCGGCAGGAGAGGGGCGCTAGCTTCTA
TCCTTGAGAAATGCATGCAACTTATGAATTGAAGGTAAAGATTTCCACCC
CAGAATCCCCGAGGTCTTCTTTTGCAGCAGGAACGGCGGTGTTTTCAAGT
TCTTGGAGAAAAAAAGAGAAGAAACTGGAGGAAACCAACCTGACCCGCCG
GGTCCGATGTCACATCTCATGGCTGATACGCATAACCAAGCAAACTGGTG
GACTTTTTCAATGGGCATTCACCGGTTGCTGCCGTGCCTGTAGCTACGTT
CGACAAACGAGTCCGACGCCATTGCCGACTGTCTCCCGTCACCAGAGTTG
TCCTCACCGCAGTTCGGCTGTCCACTCCTCGATATCTCACGCACACACAC
ACACACATTTATGCACGCGTCACGCATATGTGTTATCCTGCAGAACTCCG
ACGTCAACAGTCCGGGCGTGTGCAGCGCTTCTCCTCGGAAAGACGAAGCT
CCTCCAGGACTCGACCCCTGGACAGCAGCAGCGGCAGCGGCATGCTTGCC
CGGCGACATCGCCGACCCGTCGGCCAAGCCGACGCGGATGTCCAGGTGGC
CTTCCCCCCGAACTTCGATGACAGACGAAAGAGCCGGTCTGGCTCCGAGG
GCGAGAGCAGTAGCAGCAGCAAGGCTCGCGGGAGTAGCGACAGCCTGGGC
ACCAAGTCGGGCTCGACGTCCCTGCTGTCGATGCTTTCGGGGTCTCCTCG
TTCGCTCGGCACCGCGCACGATTCGGCCGCCGGGAGCTCGCCGCGCACCC
CGCTGTCCGACCACTCGTCCACGGCGGGCTCCACACGCGGCGGCAGCGGC
AGCAGAGGCAGGCGCGCGTCTTCAGTAGCTTCTGTCGCGGCTGCTGACGC
AGCCGCTCCTGGCGACCTCGGGCACGAGCCCTGGAGTTCTTCCTCCACCA
CAACCGCACCCCGCCGTGCACAGAAGGAGGACCTCCCGCCAGAGGTGTCC
GTGCGCGAGGCGGGAGACGGCGGCGGCGACGGGGAGTTCGATGACATGGA
CTTGCCTTCCGCGCACCCCACACCCCTTTCGGCGGTCGGCGGCGAGACGC
AGGGGCCTTCGGACCACCCGTCGATGGAACCGAATGAGGGGGAAGATTCT
TCGGCCGGCCGTAGTCGCAGCCAGCGCCGCACAAGCGGTGCCGCCGGCGA
GGTCACGTCGACAAAGTCGTCCGTGGGTTCGTCGTTTGCGGAGCGGCTAA
AATACTGGGGCGGGGCGGGCCGCAAAGCCAGCGCGGCCTCGTCGGGTTCG
GCACCAGCCAAGAATGTCCACGGCGGAGGTGGTGGTGGCAGCAGCGATGC
CGGTGTCACTAGCGGCACTGATGCGAACGAGGTGACGCTACCATCATCGC
CCGCGGCGCGAACCCCTGCATCGTCCCCTTCGTTTGGCGTGTCGCCCAGG
AAACCCCCCGTATTGTTCAACGCCTCCTTGGAACGAAGAACCTCAAGTCA
CAGCAAAAGCAGCAGCAGCGGCAGCTTAGGCCACGATGCGGAACGCCGCT
CTGGAGGCAGCCTTAGCGTAGCGAGGCGCGCGGTCAACTCGTCGTTGTCC
GATCTCCCCCAGCCGCCGTCCTACTACGAGTCAACAACATCCGGAGTCAG
TGCCATGTCGTCGTCCGAACTTCGCGGTTGCCAGGTGAGGCCGTTCGACT
CGGTCACGTCGGATGCGATGGAGGCTCACGACATGGGGCCGCCTCCGGCC
TACCGGCCCTGGGGGTCGACCAAAGCGCAGCGGTCACAGCCACAGCGACC
CTGCCGTTGCCGCCTTTCCTTGCTAGTCAAGAGGAAAGGACGGGACCAAG
GCCTGGTTCGGGGTCTCGTTCTTCCCGGCAAAGTGCCGGGGGGGGAAGTC
GATCGACACCCCCGGTGCAATCCCCGACGCCCTCGGCCGTGTCGCGAAAC
TTCAGTGACTTCGGCGCGTCCCACCGCGCAGAGCTCATGGCGATGCGCCG
CGCAAGGGGGGCTCCCTCGCCCGCAGACGAAGACGTCAAGGACGAGGAAG
AGGAGAAGAAGTCAGAGGACGAATCGGACATGGACTCGGACGCCTCCTCT
AGCAAGGGGGGGGCGGGAAATTATGCTTATTTTTCTCCCGTAAAGCCGCT
GGCGGTGGTCAAGGCCGCTTCTCCTCGGCCCCCACCCCGGTATCTCGCGA
CCACCAAGACCTCCAAGACGAGCACGAGCACCCACAGCGTCGATGTGGCG
CCCCAAGAGCTCCAGCAGCCTCGGCAGTCCCCGAGGCAAGCCGCGCCTTC
GCCTACGCCGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGGTACATGG
CCATCGTGGAGGCCGCCAACGTTAGGTCCGCGCTCGATAACTCCTCCACC
TCGGAAAACACGGACGCGTCTCCGTCCGAGGACGACGGTGGTATGATGGC
CGAGATCCTGACGGACCGTCTGATGGAGGTGTGTAGCAAGATGGAGCAGG
TGGTCACCTCGCCGGAGGACGAGCTTAGCGACGGCCCGGCGGACTCGGTG
GCGGTGGGAGGTGGGAGCGGGGTGCACAAGCGTCGGCCGTCGTCCAGGCG
CCGTCAGCACTCCAACATGTCCAGCCGGACTTTGCATAGCACCGTCGGCG
ACATCGAGGAGAACGATGCGGACAGCGACGAGGGAAGCACCGTGGATGCT
GGGGCCGCGGCCCGCAAGCTTCGAAGAGAGCGGTAAGTGTGGGGGCGTGG
GTGTTTTTTTTTCAAGGGCACAGCAGTGAGCTTGTGGCCAGGGAAGTCGA
CCGCATCAGTTGGACCAGTACGGACAATAGAAGTCACTGAGTAGAGACAC
TGGAACGTTTTTTTTGTGAAGACAACAACAACAACAACAACAACAACAAC
AATATGCTGCGAACCTCGGTTCCTTGCCCGAAGTTCCCGGCAAGGGTCGG
GAGGCTGTGTTCACGGCGGTAGAGCGTGTTTCGCTAACGCTGCGCAGAAA
GAATCGTGGTGAATTCCTTCGTCACGCATGCTTGCGAAAAGAATTTCAAT
GCCTGGGTCAGCGGTGTTTCAAGGTGTCTGTGGTGAGACGTTAGCCCTAG
TTCTCCCGGAGTTCTCTGTCGCAAATCGCATCTCTTCTGGGTCTCTCTTC
TGTCGCACGCACACACCTGATTCCCCCTTTTTTCTTCCGTCTCTCTGTCC
GCCTGCTGTTTTTTTTCGCGTTACTTGTTCCGCGCGCATCCCGGCCCCCC
AAAACCCAGGCTCAGAAAACGAACCAAGCAGTCGCGGAAGCTGTCGTCGG
TCCTCGCAGTTCCGAAAGACGACAGAGGGGAGGTGATCAACCTGCACACG
GCCGCCTACAACGGAGAGAGAGAGGGGCTCACGGCATACATTGCGCAGGG
CGGCGACTTGGAGGTGAGGCAACAGTTGTATCGCGTTGTACCAGTGCGGC
AGAATGAAAGCGCCCCTCCTTGGTAGCGAACCCCCGCTGAGCCCGTTTCA
TGTTTTGGCACATGTTTGTGTGTTGTTTCGCGTTTTTTCCGCGATTAATA
GAAAAAAAGAGAAACACATGAGAAATAATCTCTTTGACGCACACACAGAT
GCGACGTAGAATTGTTTCACGACTCCCGTCGGCTGTTTTTCCCTCCCACC
GGCGCTCGCCTGCGTTTCTCGCTTGACGCACTTGCCCTACCCCGACGCCA
CCCTCTTGGGGGCCCTGCAGGTTCGCGATAAGTTCCAGGCGACCGCCCTC
ATGCTGTGCACCGAGCGAGGGCACAACGACATGGTGGAAGCTCTTGTCTC
CGCCGGGGCAGAAGCGTCCTGCGTCGACGAAAACGGCAACAGCGCCCTCC
ACCTAGCGTGCTTCTACGGCAACCTGGAGGCGGTCGAGTTGCTGCTGGCG
GTTGACGCCGACATCGCGGTGAGAGAGGTTGTTTTTTTTTTCATCGTGTG
TTCTTCCGGCTGGCGGCGCTTGTTTTCCTTGTTTTTCGTGTTTCGCGTCT
TGGCGTAAAGAAAAGACTTCCGTCCTATATATGCACAGAGGCGTTTTTCT
TGTTTGTCTTTTTTTTTTCCCGTTTTTTTTCGTTTTTCTGCTTGTTTTGT
CCTGTTGCTTTGCCTCATTGGGCTTTTTTGTCCCTCTTCTAGGATCGGGA
TGGATGAGACGATCGGCCGAGAAATAACCTCAAGAACGGCGATTTGGTTG
CTCTCTTCTGTCCTGTCCTGTCCTGTCCCGTCCTGTCCTGTCCTGGGCAT
TCAAAGCCGATACCACGCTTGCGTACGCGCTCCTTCCAGAAGACTATGTC
CGGGACGTTTGCCCCCCCTGCGTTCATCTTTTTTTTCATTCTGTTGGCCT
CATTTTGATTCAAGCAGGCGGTGGACTCCGAGGGCAGAACGCCCCTGAAC
CTCGCCACGGACCCCAACATTCGCCGCGTGTTGCGGAACGAGGAATTTGT
TCGATATTCCGGGGAGAATTTCGACCTTCTGGCTGCGGTCGAGGTGAACG
ACACTACGGTGAGTTAGTCTTGGTTTCTTCTCCCCTTCGACATTTGCTGT
ATTTTTCGTCTTGCGTACGAAACCGTTCTTTCCCGCCCAAGAGCAACTAG
CAAGATATTCCGGCTAGCCCTGGGCGAGCCGTGGGAGAGTCCAGTCTCCC
GCTACATGAACCCGGTTGAACAAAAAAAAAAAAAGCTTGGCCTCTGTCGG
GTGGTCGTGGAACTCCTTCATATGCCGTCTCCGTTTTGGATTTGTCGCGA
GCATCGAACATCAACGTCGTCGCGTGTTGTGTGCTTCTAAACCTTAACCG
TTAGCAAGCACACGCAAAACGGCATGCCGCACACCAAGATCGCATCGCCA
TCCCATCTCCTCTCCCCGCCCCCCAAAACAAAATATCCTTGACAACCAGG
CCTTGGCGAACTTCATCGCCATGGGGCAGGAAGCCTGCGGCTTCCCCCAT
AATCCCAACGCCGTCGCGGTCGCTGCGAAGCGGCTCAGGCTCGATCGCGT
GGGACGGGGCGGCATGAGCGCCGCGCACCTCGCTGCCTTCCACGGCTACG
CGGACTCTCTTTGCCTCCTGCTCGAGGCAGGGGCGGACGCGAACGCCGTC
TGCGACGATGGGGAAACCCCGCTCCACACGGCTTGTAACGGGGGCAGCCT
TCTCTGCGCTTCTCTCCTCCTAGATCACGGTAAGCGACAGAGAGAAAGAG
AGCATGAAGCAGATGATGCCGGGCGGCGCGCGCGTATCTTTTTGTCTTGT
CTTTCGTATCATTCCTTCGTGCCTGCTACTCCAACCCGTGGGGTAGCAGA
CGGAGCACCCCCTCTCGCCGCGATGGATCTTTTACCGCCGAAGATCGTGT
CCTCCCCGTTCCGTGCATGGCTCTCCTTCTGTCACACCTTTTGTTTGCCA
TCGTAGGGGTTGTTGCGGGTGTGCTTTCCGTGTTACCACTTTCTTTCAAT
TTTCTTCTTACAACTCGTGTTCACCACCTGTTTTTTTAATCTTTTGATTG
TCTTATAACTCTTTTGATCCATGGTCTTTTCTTGCCTTGCTGGGGGTTCC
GTGGCTTGGTCGTTTTTTGCCAGGGGCGAACCCGCTGGCCACCGACGGGA
AGGGGCTCGTCCCGTGCGAGAAACACATCGCCGGAGGTCGTCAAGAGATG
AAGCAGCTCCTCGAGTCCAAGGCCTTCCAAGGTGAGGGACCGGGGACCCT
TTTTTCCGCCTCCCTACTGTGGCACATAAGCGCGTGGACGCCATCTCTCG
GTTGCCTTTGTCGAGAACGAGCAGCGGAACGTTCCTCAGTCCCGCTTGTA
GACACGAGTGGCAGTCGCGGGAGTCGGACTCGAAAGAGGGCCCTCGGAAA
AGAGCAGCACCGTGTGGCCCTTCGTCCCCTGCCCCTGCCCTTTTCATCAC
TGACTTTCCCTTTCCGCTTCCCTCACGCTCGCTGCATGCTTGCATTTTCT
CTCTTTGTTGCCGGTGCCGGTGCCCTTTTTTTTGTTGCGAAAAacAAAAA
ACAAAACAAAAAAACGACGCGGTTTCCCACGAAACAGCCACTCCCGCGAA
CCTTCTCTCCCTGCGGTCCGACCTCGCCGCGGTGGCGCTCCAGATCGACG
CCGAAGAGGACCTCTTCGTGCGGAAGGGCGTGGCCATCAAGTACCTCCGG
AGGGCACTGAAGAAAAAGGACGTCGACATCGCCAGGCTGAGGCAGGCCGT
GGAGGCGAGGGATACCGACATCCGCAACCTCGCGGACCGGATGGAGGGCG
TGCACCGGCTGCTCAAGGGGATCTACTCGCAGTGATCTCCGGTATCTCCG
GTCATTTCGTCGTTATTCTGGTGTCCGTTTGTTGTTCTCGTCGTCGACCG
GTTGACCGGTCTTTTGTTGGTTCCGTCGTTATCGGGAGGGGGTTCCGTGG
CTGTGTGGCGGGGATGTTTCCCTGCTACCGCCGACTGCGTCATGAACATA
CCGGCAGCGCCAAGTTTGGGTGCTGTCTGCATGGGGCAGGTGTGCCCCAC
AGCGCAATCCCGAGCAAACGCCTGCTCTGAATCGTGGGGTGGTTGTTGCT
GGACGTTGTTTACGTGCGAGGAGTTCACGTGCTTCTCTGTGTGGTGATCG
GTGCTGGCTTGTTGTGTGACACGAAATGGAATCCGGTATCTTGTGTGTGT
TTCGTTTTGTGACATTTGAAGATTTCGTTGCGAACGTT back to topCoding sequence (CDS) from alignment at P-lacustris_contig1025:5138..15225+ >mRNA_P-lacustris_contig1025.316.1 ID=mRNA_P-lacustris_contig1025.316.1|Name=mRNA_P-lacustris_contig1025.316.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3750bp|location=Sequence derived from alignment at P-lacustris_contig1025:5138..15225+ (Pleurocladia lacustris SAG_25_93) ATGGCGATGCGCCGCGCAAGGGGGGCTCCCTCGCCCGCAGACGAAGACGT CAAGGACGAGGAAGAGGAGAAGAAGTCAGAGGACGAATCGGACATGGACT CGGACGCCTCCTCTAGCAAGGGGGGGGCGGGAAATTATGCTTATTTTTCT CCCGTAAAGCCGCTGGCGGTGGTCAAGGCCGCTTCTCCTCGGCCCCCACC CCGGTATCTCGCGACCACCAAGACCTCCAAGACGAGCACGAGCACCCACA GCGTCGATGTGGCGCCCCAAGAGCTCCAGCAGCCTCGGCAGTCCCCGAGG CAAGCCGCGCCTTCGCCTACGCCGCTGCCGCCGCCGCCGCCGCCGCCGCC GCCGCGGTACATGGCCATCGTGGAGGCCGCCAACGTTAGGTCCGCGCTCG ATAACTCCTCCACCTCGGAAAACACGGACGCGTCTCCGTCCGAGGACGAC GGTGGTATGATGGCCGAGATCCTGACGGACCGTCTGATGGAGGTGTGTAG CAAGATGGAGCAGGTGGTCACCTCGCCGGAGGACGAGCTTAGCGACGGCC CGGCGGACTCGGTGGCGGTGGGAGGTGGGAGCGGGGTGCACAAGCGTCGG CCGTCGTCCAGGCGCCGTCAGCACTCCAACATGTCCAGCCGGACTTTGCA TAGCACCGTCGGCGACATCGAGGAGAACGATGCGGACAGCGACGAGGGAA GCACCGTGGATGCTGGGGCCGCGGCCCGCAAGCTTCGAAGAGAGCGATGG CGATGCGCCGCGCAAGGGGGGCTCCCTCGCCCGCAGACGAAGACGTCAAG GACGAGGAAGAGGAGAAGAAGTCAGAGGACGAATCGGACATGGACTCGGA CGCCTCCTCTAGCAAGGGGGGGGCGGGAAATTATGCTTATTTTTCTCCCG TAAAGCCGCTGGCGGTGGTCAAGGCCGCTTCTCCTCGGCCCCCACCCCGG TATCTCGCGACCACCAAGACCTCCAAGACGAGCACGAGCACCCACAGCGT CGATGTGGCGCCCCAAGAGCTCCAGCAGCCTCGGCAGTCCCCGAGGCAAG CCGCGCCTTCGCCTACGCCGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCG CGGTACATGGCCATCGTGGAGGCCGCCAACGTTAGGTCCGCGCTCGATAA CTCCTCCACCTCGGAAAACACGGACGCGTCTCCGTCCGAGGACGACGGTG GTATGATGGCCGAGATCCTGACGGACCGTCTGATGGAGGTGTGTAGCAAG ATGGAGCAGGTGGTCACCTCGCCGGAGGACGAGCTTAGCGACGGCCCGGC GGACTCGGTGGCGGTGGGAGGTGGGAGCGGGGTGCACAAGCGTCGGCCGT CGTCCAGGCGCCGTCAGCACTCCAACATGTCCAGCCGGACTTTGCATAGC ACCGTCGGCGACATCGAGGAGAACGATGCGGACAGCGACGAGGGAAGCAC CGTGGATGCTGGGGCCGCGGCCCGCAAGCTTCGAAGAGAGCGGCTCAGAA AACGAACCAAGCAGTCGCGGAAGCTGTCGTCGGTCCTCGCAGTTCCGAAA GACGACAGAGGGGAGGTGATCAACCTGCACACGGCCGCCTACAACGGAGA GAGAGAGGGGCTCACGGCATACATTGCGCAGGGCGGCGACTTGGAGGCTC AGAAAACGAACCAAGCAGTCGCGGAAGCTGTCGTCGGTCCTCGCAGTTCC GAAAGACGACAGAGGGGAGGTGATCAACCTGCACACGGCCGCCTACAACG GAGAGAGAGAGGGGCTCACGGCATACATTGCGCAGGGCGGCGACTTGGAG GTTCGCGATAAGTTCCAGGCGACCGCCCTCATGCTGTGCACCGAGCGAGG GCACAACGACATGGTGGAAGCTCTTGTCTCCGCCGGGGCAGAAGCGTCCT GCGTCGACGAAAACGGCAACAGCGCCCTCCACCTAGCGTGCTTCTACGGC AACCTGGAGGCGGTCGAGTTGCTGCTGGCGGTTGACGCCGACATCGCGGT TCGCGATAAGTTCCAGGCGACCGCCCTCATGCTGTGCACCGAGCGAGGGC ACAACGACATGGTGGAAGCTCTTGTCTCCGCCGGGGCAGAAGCGTCCTGC GTCGACGAAAACGGCAACAGCGCCCTCCACCTAGCGTGCTTCTACGGCAA CCTGGAGGCGGTCGAGTTGCTGCTGGCGGTTGACGCCGACATCGCGGCGG TGGACTCCGAGGGCAGAACGCCCCTGAACCTCGCCACGGACCCCAACATT CGCCGCGTGTTGCGGAACGAGGAATTTGTTCGATATTCCGGGGAGAATTT CGACCTTCTGGCTGCGGTCGAGGTGAACGACACTACGGCGGTGGACTCCG AGGGCAGAACGCCCCTGAACCTCGCCACGGACCCCAACATTCGCCGCGTG TTGCGGAACGAGGAATTTGTTCGATATTCCGGGGAGAATTTCGACCTTCT GGCTGCGGTCGAGGTGAACGACACTACGGCCTTGGCGAACTTCATCGCCA TGGGGCAGGAAGCCTGCGGCTTCCCCCATAATCCCAACGCCGTCGCGGTC GCTGCGAAGCGGCTCAGGCTCGATCGCGTGGGACGGGGCGGCATGAGCGC CGCGCACCTCGCTGCCTTCCACGGCTACGCGGACTCTCTTTGCCTCCTGC TCGAGGCAGGGGCGGACGCGAACGCCGTCTGCGACGATGGGGAAACCCCG CTCCACACGGCTTGTAACGGGGGCAGCCTTCTCTGCGCTTCTCTCCTCCT AGATCACGGCCTTGGCGAACTTCATCGCCATGGGGCAGGAAGCCTGCGGC TTCCCCCATAATCCCAACGCCGTCGCGGTCGCTGCGAAGCGGCTCAGGCT CGATCGCGTGGGACGGGGCGGCATGAGCGCCGCGCACCTCGCTGCCTTCC ACGGCTACGCGGACTCTCTTTGCCTCCTGCTCGAGGCAGGGGCGGACGCG AACGCCGTCTGCGACGATGGGGAAACCCCGCTCCACACGGCTTGTAACGG GGGCAGCCTTCTCTGCGCTTCTCTCCTCCTAGATCACGGGGCGAACCCGC TGGCCACCGACGGGAAGGGGCTCGTCCCGTGCGAGAAACACATCGCCGGA GGTCGTCAAGAGATGAAGCAGCTCCTCGAGTCCAAGGCCTTCCAAGGGGC GAACCCGCTGGCCACCGACGGGAAGGGGCTCGTCCCGTGCGAGAAACACA TCGCCGGAGGTCGTCAAGAGATGAAGCAGCTCCTCGAGTCCAAGGCCTTC CAAGCCACTCCCGCGAACCTTCTCTCCCTGCGGTCCGACCTCGCCGCGGT GGCGCTCCAGATCGACGCCGAAGAGGACCTCTTCGTGCGGAAGGGCGTGG CCATCAAGTACCTCCGGAGGGCACTGAAGAAAAAGGACGTCGACATCGCC AGGCTGAGGCAGGCCGTGGAGGCGAGGGATACCGACATCCGCAACCTCGC GGACCGGATGGAGGGCGTGCACCGGCTGCTCAAGGGGATCTACTCGCAGT GACCACTCCCGCGAACCTTCTCTCCCTGCGGTCCGACCTCGCCGCGGTGG CGCTCCAGATCGACGCCGAAGAGGACCTCTTCGTGCGGAAGGGCGTGGCC ATCAAGTACCTCCGGAGGGCACTGAAGAAAAAGGACGTCGACATCGCCAG GCTGAGGCAGGCCGTGGAGGCGAGGGATACCGACATCCGCAACCTCGCGG ACCGGATGGAGGGCGTGCACCGGCTGCTCAAGGGGATCTACTCGCAGTGA back to top
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