prot_P-lacustris_contig1025.318.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1025.318.1
Unique Nameprot_P-lacustris_contig1025.318.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length118
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1025.318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1025contigP-lacustris_contig1025:23851..30471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1025.318.1mRNA_P-lacustris_contig1025.318.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1025 23736..30505 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1025.318.1 ID=prot_P-lacustris_contig1025.318.1|Name=mRNA_P-lacustris_contig1025.318.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=118bp
METADRHQRHATTVPGLAVGAYGSIASLVQPWHSRLQRSPRQRRGENHHD
GYHLLLQLWALKSVLSGLPNVPAPCPTSLGPSSLSLLRLPSYFFKLGIQN
SMLLLVHVSLSFCLARS*
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