mRNA_P-lacustris_contig101.201.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: D7G1S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1S6_ECTSI) HSP 1 Score: 436 bits (1122), Expect = 6.250e-147 Identity = 224/280 (80.00%), Postives = 244/280 (87.14%), Query Frame = 2
Query: 182 MVSGVG-KQAAVQLPSGRFAPCWPIGLGQYNGGPAVFLASKRRILDPREEVLPIPIAEETVPLLSEAMQPRDVTIAVLLRTCSPLFSRNGGMYDNIPWEWSDDAMAKREAFQRSQGKGMMDIGAMVGGDSKT---------QQLQAFGSAYGLLADVASTLCPADILSLIVEEEESGSGGISLGASAYVRRRPDAVGGEEERRIIEVTTDEAVGVALALGRQVYVDEDIWEGCRVRVNFVMDGDKMRLDLDNIRGKEVSS-SEREAPPEQPPAWTLKSRG 988
MVSG G +QA VQLPSGRFA CWP+GLGQYNGGPAVFLA+KRRILDPREEVLPIPI EE PLLSEAMQPRDV++AVLLRTCSPLF RNGGMYDNIPWEWS D MAKREAFQRSQGKGMMD+GA+VG QQ QAFGSAYGLLADVA+TLCPADILSL VEEEESG+GGI+LGASAY+RRRPDA G +R IIEVTTDEAVGVALALGRQVYVDE+IWEG RVRV FVMDGDKMRLDLDN+ G+++SS S++EAPP QPPAWT+KSRG
Sbjct: 4 MVSGTGSRQAPVQLPSGRFAACWPVGLGQYNGGPAVFLANKRRILDPREEVLPIPIPEEAAPLLSEAMQPRDVSVAVLLRTCSPLFGRNGGMYDNIPWEWSGDDMAKREAFQRSQGKGMMDMGAIVGXXXXXXXXXXSVTQQQTQAFGSAYGLLADVATTLCPADILSLFVEEEESGAGGITLGASAYLRRRPDAEGRGGQRSIIEVTTDEAVGVALALGRQVYVDEEIWEGGRVRVKFVMDGDKMRLDLDNVEGRDLSSTSDKEAPPVQPPAWTIKSRG 283
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: A0A835ZMI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMI0_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.910e-34 Identity = 92/272 (33.82%), Postives = 142/272 (52.21%), Query Frame = 2
Query: 140 TALLRTSTSTCSVKMVSGVGKQAAVQLPSGRFAPCWPIGLGQYNGGPAVFLASKRRILDPREEVLPIPIAEETVPLLSEAMQPRDVTIAVLLRTCSPLFSRNGGMYDNIPWEWSDDAMAKREAFQRSQGKGMMDIGAMVGGDSKTQQLQAFGSAYGLLADVASTLCPADILSLIVEEEESGSGGISLGASAYVRRRPDAV------------GGEEERRIIEVTTDEAVGVALALGRQVYVDEDIWEGCRVRVNFVMDGDKMRLDLDNIRGK 919
TA L + + V ++S + + SG + P+GLG+YNG PA FL+ + ++ PR E+LP+PI + +LS+AM + L L +R+GG+YDN+PWEW +AKR AF R + G + SAY LLA C A + ++++EE++S GG+SL + V R P V GGE ++E DEAVGVALA GR + ++ ++E + NF+M+ +MRL++D +RG+
Sbjct: 3 TARLAVACISALVPVISALSYSLPI---SGDWLELSPVGLGRYNGEPAAFLSRSQSLVSPRTELLPLPIDSKACDMLSQAMGQAPLAKLALAAAAQSLLNRDGGLYDNLPWEWGAP-LAKRAAFAR-----------VSSGRAPPPTPDDCASAYDLLARCLRADCNAVLKTIVIEEDDSREGGLSLAGALAVERLPQMVTLLGETFPRPFSGGE--LAVVECAADEAVGVALAQGRALCIERSLFEAASLPANFIMEDGRMRLNID-LRGQ 256
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: A0A7S4F108_CHRCT (Hypothetical protein n=4 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F108_CHRCT) HSP 1 Score: 108 bits (271), Expect = 4.740e-22 Identity = 94/274 (34.31%), Postives = 136/274 (49.64%), Query Frame = 2
Query: 251 IGLGQ-YNGGPAVFLASKRRILDPREEVLPIPIAEETVPLLSEAMQPRDVTIAVLLRTCSPLFSRN-GGMYDNIPWEWSDDA-MAKREAFQRSQGKGMMDIGAMVGGDSKTQQLQAFGSAYGLLADVASTLCPADILSLIVEEEESGSGGISLGASAYVRRRPDAVGGEEERRIIEVTTDEAVGVALALGRQVYVDEDIWEGCRVRVNFVMDGDKMRLDLDNIRGKEVSSSEREAPPEQPPA------WTLKSRGPCFACRWK---RSGLASGL 1036
IG G+ Y P VFLA + PR +LP+P++ + L +A PR +T A L L R+ G + +++PWE S +A+R+A+ R G+G D T F SAY LL D+A C + +++EE + G + LG + V R+ DA G ER + E T +EA+G+ALAL RQV+V+E++ V F + G KMRL L R + + S R AP P W L S + + RS LA+GL
Sbjct: 45 IGFGEAYEQHPGVFLAKDQS--QPR--MLPVPLSRRLLATLEQADDPRKLTAAELFLDARLLAERDCGNLIESLPWEDSPSGILARRDAYARLVGRG----------DGLTD---GFFSAYHLLLDIAQRKCGVQVEHVLLEETDL-FGSLRLGGAVVVARQSDA--GLSER-VCECTVEEALGIALALDRQVWVEEEVVRAAETPVQFTLQGGKMRLQL-RPRTEVDAGSPRPAPDAAEPGAKAVLPWELTSAAELLSMSREDKARSALAAGL 296
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: A0A7S0L3C8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L3C8_9EUKA) HSP 1 Score: 103 bits (257), Expect = 6.070e-20 Identity = 84/276 (30.43%), Postives = 127/276 (46.01%), Query Frame = 2
Query: 134 PATALLRTSTSTCSVKMVSGVGKQAAVQLPSGRFAPCWPIGLGQYNGGPAVFLASKRRILDPREEVLPIPIAEETVPLLSEAM-QPRDVTIAVLLRTCSPLFSRNGGMYDNIPWEWSDDAMAKREAFQRSQGKGMMDIGAMVGGDSKTQQLQAFGSAYGLLADV-ASTLCPADILSLIVEEEESGSGGISLGASAYVRR---RPDAV---------------GGEEERRIIEVTTDEAVGVALALGRQVYVDEDIWEGCRVRVNFVMDGDKMRLDL 901
P T +LR + +V V A L G +G+G+ PA+FL + VLP+PI + V + +A+ R+ VLL C+ + R+GG++DN PWEW+ AKR+AF R QG+ +G + S Y LL ++ S C ++ +V E+ GG+ LG + V R D V G E R+ E T DEA+G+ALALG +VYV+E +W ++ + K+RLD+
Sbjct: 30 PVTDMLRVFLVQLQLLVVWTV-PPALRSLGDGALTRLKVVGIGRCASSPALFLQEET---SSSSSVLPVPIPLDAVMAMEQALCGERNAKAEVLLHCCA-IADRDGGIFDNFPWEWTTSPFAKRDAFSRFQGRAYPRVGYL--------------SPYHLLLELFRSESC---FVTHVVIEDTDVLGGLVLGGAVIVERCLPPSDGVMPTDLPVAADTRWPEGSTTEPRLCECTVDEALGIALALGGEVYVEETVWLAAMTAPSYSLQRGKLRLDV 283
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: A0A7S1U145_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U145_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.760e-18 Identity = 60/128 (46.88%), Postives = 79/128 (61.72%), Query Frame = 1
Query: 994 FRMSVEEKRACLRASGVRPPRKRALAESADPDRDLEDLMLPRMDEAVRRDVLMARAWREGDFATASELCAGKSERHIVAEQLQVAMKDKDEKLASILMQRLEILESCRMDPTQDEGSYQKDLDADEWY 1377
F++++ EKRA L SG PR R E+A L+ +LP +DE VRRDV + +A R GD SEL +SER V QL+ A+ D+D LA+ L +L++L+ CR D TQDEGSY LDAD WY
Sbjct: 266 FKLTLAEKRALLARSGADVPR-RGRGEAA-----LDSALLPLLDENVRRDVQLMKALRAGDMERVSELSQNRSERGSVKMQLESAVADEDYALAAELQAKLDVLDRCRADITQDEGSYDPYLDADPWY 387
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: A0A7S2PQW3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQW3_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.440e-17 Identity = 57/137 (41.61%), Postives = 80/137 (58.39%), Query Frame = 1
Query: 988 ALFRMSVEEKRACL---RASGVRPPRKRALAESADPDRDLEDLMLPRMDEAVRRDVLMARAWREGDFATASELCAGKSERHIVAEQLQVAMKDKDEKLASILMQRLEILESCRMDPTQDEGSYQKDLDADEWYERDR 1389
A MS++EK L + R PR R + E+ + + L+DL+LP +DE VRR V + +A +EGD A+EL G+S+R E + A +D +E LA + E+L + D TQDEG+Y LD DEWYERDR
Sbjct: 101 AFDAMSIKEKAELLLSLESFKGRLPRPRVIREAGNTAKPLDDLLLPLIDEGVRRQVKIRKALKEGDTELANELQKGRSKRQQARELAEAARRDGNEALADMWSDEAELLSDLKADATQDEGTYSSFLDKDEWYERDR 237
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: A0A7S2ZQZ0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQZ0_9RHOD) HSP 1 Score: 89.4 bits (220), Expect = 1.380e-15 Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 1
Query: 925 FVFRERGPARTAPCMDA*VEGALFRMSVEEKRACLRASGVRPPRKRALAESADPDRDLEDLMLPRMDEAVRRDVLMARAWREGDFATASELCAGKSERHIVAEQLQVAMKDKDEKLASILMQRLEILESCRMDPTQDEGSYQKDLDADEWY 1377
FV R + A T ++ + + RMSV E R LR++G+ P + R+ +L + ++P +DE+ RR +L+ A R D+ ASEL AG+SER V +QL+ A+ ++ A L +R + L R DPTQDEGSY + LD DEWY
Sbjct: 244 FVERSKSDADTGKPVELMTKDEIRRMSVPELRTALRSAGI-PSKTRSTRG------ELLNRLIPMIDESERRSMLIDEAVRREDYGRASELQAGQSERSRVKQQLEEAVAEERYLDAQKLQERFDRLTEMRADPTQDEGSYDRYLDQDEWY 387
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: A0A7S2RI23_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RI23_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.730e-15 Identity = 65/170 (38.24%), Postives = 89/170 (52.35%), Query Frame = 1
Query: 892 AGLGQHSGERGFVFRERGPARTAPCMDA*VEGALFRMSVEEK-RACLRASGVRPPRKRALAESADPDRDLEDLMLPRMDEAVRRDVLMARAWREGDFATASELCAGKSERHIVAEQLQVAMKDKDEKLASILMQRLEILESCRMDPTQDEGSYQKDLDADEWYERDRRRA 1398
AGL F E G A + L +S+E+K R L + + P RA + D L+DL+LP MDEAVRR+V++ RA + D+A L A KS R + +++Q A +E +A L + LE+ + R D TQD G Y LD D+WYERDRRRA
Sbjct: 173 AGLFLFQPGEAFAEAEGGGAGPRQAWELESAEDLRGLSLEDKARTLLASENYQGPLPRARKVRLEGDGVLDDLLLPVMDEAVRREVMLERAIAQRDWAEIQRLSADKSVRSKLRDEVQRAEDSGEEDVARRLRRELELASTLRADITQDSGDYSSFLDKDDWYERDRRRA 342
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: A0A7S0TCN8_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TCN8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.150e-15 Identity = 55/132 (41.67%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 1000 MSVEEKRACLRASGVRPPRKRALAESADPDRDLEDLMLPRMDEAVRRDVLMARAWREGDFATASELCAGKSERHIVAEQLQVAMKDKDEKLASILMQRLEILESCRMDPTQDEGSYQKDLDADEWYERDRRR 1395
MS+E++ + A+G+ PPR R L +A ++ ++LPR+DE VRR+VL+ RA + GD A+EL AGKS RH ++++ A D + + IL++ R DPTQD SY LD D WYE RRR
Sbjct: 240 MSLEQRLRVIVAAGLEPPRPRRLDVAA-----VDAVVLPRVDEIVRREVLVERAIKAGDLKRANELMAGKSPRHRAFDEVREAADGDDLFKEAAARDKKAILDATRADPTQDPFSYDPYLDQDPWYEEQRRR 366
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Match: A0A7S4L3H0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L3H0_GUITH) HSP 1 Score: 84.7 bits (208), Expect = 6.890e-15 Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 991 LFRMSVEEKRACLRASGVRPPRKRALAESADPDRDLEDLMLPRMDEAVRRDVLMARAWREGDFATASELCAGKSERHIVAEQLQVAMKDKDEKLASILMQRLEILESCRMDPTQDEGSYQKDLDADEWYERDRRRASRG 1407
L MSVE+ R L GV P +A E +LEDL+LP MDE RR V++ RA D+ TAS+L A +S R +A + A++++ A+ L + LE++ R D TQDEGSY LDAD+WY +D R +G
Sbjct: 110 LLAMSVEQLRFILAEQGV-PSSSKATKE------ELEDLVLPGMDEVERRIVMIQRAVEREDYGTASQLAANQSRRGRIAAAIVEAVREERYYEAAELQEELEVITMGRADITQDEGSYDPYLDADDWYVKDLMRRRKG 241 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig101.201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig101.201.1 >prot_P-lacustris_contig101.201.1 ID=prot_P-lacustris_contig101.201.1|Name=mRNA_P-lacustris_contig101.201.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=328bp MAIRQRQRWRLWFLTLCAWAARVRPATALLRTSTSTCSVKMVSGVGKQAAback to top mRNA from alignment at P-lacustris_contig101:220897..229196- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig101.201.1 ID=mRNA_P-lacustris_contig101.201.1|Name=mRNA_P-lacustris_contig101.201.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=8300bp|location=Sequence derived from alignment at P-lacustris_contig101:220897..229196- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig101:220897..229196- >mRNA_P-lacustris_contig101.201.1 ID=mRNA_P-lacustris_contig101.201.1|Name=mRNA_P-lacustris_contig101.201.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1968bp|location=Sequence derived from alignment at P-lacustris_contig101:220897..229196- (Pleurocladia lacustris SAG_25_93)back to top |