mRNA_P-lacustris_contig101.188.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: D7FLW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW4_ECTSI) HSP 1 Score: 393 bits (1010), Expect = 2.300e-122 Identity = 223/411 (54.26%), Postives = 274/411 (66.67%), Query Frame = 1
Query: 31 TALLVLLAFAKVRSEASDTAEEEHEEHAH---------EGSFESGAVYDVGAGTNSFIVTPAEGTFEDATFAFMVVPTISADMDGLEEAEHEAEGAWEGFLEGTADPTMLASGDLATLSADVVYQISLEDPLAVVPFDITTAGAYAVFIEHGELPTALVSPDGEILVAGYVEEPEXXXXXXXXLNATGTAWISAIVASLIVSVCSLVGIIVVIHKKVADGINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYAGLSVMGGISIGIVVHALVGSDHPNHGATVAIMKDDKAPVAG-------TVHSSTDVTQPSSPTGSVAESLHDLIKKRDGRALFDIKGLQAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELADFMALING 1215
TALL LLA A A+ T+ +H+ +H EG FE+ AVYDV AGTNS P G+FE+ TFAFMVVP SAD+DGLE AE +AE AW+ + G D T+LASG+ AT SADVVYQ++LEDPL +VP D+T AGAYAVF+EHG E AT W +A+VASL+VS CS GI+VV K VA+ I+LSHAF FASGALLTA+LLH+IPEALEGL+ Y LHDLGLYAGL+VMGG+S+GIV+HAL+ S H +H + A AG +++ T P SP S +++L LI R G++L D+KGL+ VCWNVI GDLVHNFADGV IGAAFLSCS+T+GWTV AS+VLHE+PHE+ADFMAL+NG
Sbjct: 8 TALLCLLACA-----AAHTSHSDHDHGSHSXXXXXXEGEGHFEAAAVYDVEAGTNSLAAYPGGGSFEEETFAFMVVPAASADLDGLEGAEEDAEAAWDEYTSGAEDATVLASGESATPSADVVYQVTLEDPLVLVPVDVTAAGAYAVFLEHGSDEEGXXXXXXXXXXXXXXETG----------TATAGKWGNALVASLVVSACSFAGIVVVASKHVANNIDLSHAFVFASGALLTAALLHIIPEALEGLEESYGSLHDLGLYAGLAVMGGMSLGIVLHALLESGH-SHSPGESXXXXXXAVEAGGGGAKASAYTGTSEATLPPSPVESNSDNLQALISARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNG 402
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: A0A6H5L662_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L662_9PHAE) HSP 1 Score: 388 bits (997), Expect = 6.180e-120 Identity = 231/444 (52.03%), Postives = 293/444 (65.99%), Query Frame = 1
Query: 10 MRTSAATTALLVLLAFAKVRSEASDTAEEEHEE--HAHEGSFESGAVYDVGAGTNSFIVTPAEGTFEDATFAFMVVPTISADMDGLEEAEHEAEGAWEGFLEGTADPTMLASGDLATLSADVVYQISLEDPLAVVPFDITTAGAYAVFIEHG--ELPTALVSPDGEILVAGYVEEPEXXXXXXXXLNATGTAWISAIVASLIVSVCSLVGIIVVIHKKVADGINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYAGLSVMGGISIGIVVHALVGSDHPN----------------------HGATVA----------IMKDDKA---PVAGTVHS---STDVTQPSSPTGSVAESLHDLIKKRDGRALFDIKGLQAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELADFMALING 1215
MR +A ALL+ A V EA+ + +++E HA +G FE AVYDV GTNSFI PAEG FE T AFMVV SAD +GL AE +AE AW+ + G D T+LA G+ AT S VVYQ++LEDPL +V ++T AGAYAVF+EHG E+ L SP G + XXXXXXX +A+GT W++ +VAS +VSVCS G++VV +K+VA I LSHAF FASGALLTA+L+H+IPEA+EGL S Y+ LHDLGLYAGL+V+GG+S+ +V+H L+ S H + H A V+ + + DK P + H+ DVTQP SP S ++L LI +R GR+L D+KGLQ VCWNV+IGDLVHNFADG+TIGAAFL+CS+T+GWTVTAS VLHELPHE+ADFMAL+NG
Sbjct: 1 MRCLSAVAALLL----ACVAPEATSHSGHDYDESSHAEDGHFEVSAVYDVEPGTNSFIAIPAEGRFEQDTLAFMVVLAASADTEGLAGAEEDAEAAWDAYTSGAEDATVLAPGEPATPSTVVVYQVALEDPLVLVQVEVTIAGAYAVFLEHGAEEVGIVLASPSGVVXXXXXXXXXXXXXXXXXSGSASGTQWVNGLVASFVVSVCSFAGLLVVANKRVAYSIGLSHAFIFASGALLTAALVHIIPEAMEGLDSSYDNLHDLGLYAGLTVLGGLSVSVVIHGLMESGHSHSPHEGHSHGGGTETVRPGGGHGHHARVSDGAGTTMPLGMAEGDKVSAWPGGNSPHAVQIQADVTQPPSPAESSTDNLRALIAERAGRSLLDVKGLQPVCWNVVIGDLVHNFADGLTIGAAFLTCSATVGWTVTASAVLHELPHEIADFMALLNG 440
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: A0A6H5KN39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN39_9PHAE) HSP 1 Score: 310 bits (795), Expect = 2.890e-91 Identity = 184/400 (46.00%), Postives = 263/400 (65.75%), Query Frame = 1
Query: 70 SEASDTAEEEHEEH------AHEGSFESGAVYDVG-AGTNSFIVTPAEGTFEDATFAFMVVPTISADMDGLEEAEHEAEGAWEGFLEGTADPTMLASGDLATLSADVVYQISLEDPLAVVPFDITTAGAYAVFIEHG--ELPTALVSPDGEILVAGYVEEPEXXXXXXXXL-------NATGTAWISAIVASLIVSVCSLVGIIVVIHKKVADGINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYAGLSVMGGISIGIVVHALVGSDHPNHGA--TVAIMKDDKAPVAGTVHSSTDVTQPSSPTGSVAESLHDLIKKRDGRALFDIKGLQAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELADFMALING 1215
S AS+T+ +H+ + +G FE+ AVY + AGT+S I P E FE T AFM+VP SAD +GLE AE +AE AW+ F++G D T+LA G+ A A VVYQ +L++ + VVP ++T AGAYA+ +EHG E+ TALVSP G + A E E XXXXXXX +G W A+VA+ I S GI ++I K++A+GI+LSHA+ FA+GA+LTA+L+H+IPE+ E + LHDLG++ G++++ GI+ I++ A+ + H + GA T ++ D + G P++PT + E+L +L+++R GRALFD KGL+ +CWNVI+GD VH+F G TIGAAFLSC ST+GWT+TAS ++HE+P E+ADF+AL+NG
Sbjct: 15 STASETSHSDHDXXXXXXXXSSDGHFEAAAVYSLEEAGTHSVIAVPGEA-FE-GTLAFMLVPAASADDEGLEGAEEDAEAAWDAFMDGEEDATVLAFGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALVSPSGTAVAASVSEGMEEXXXXXXXXXXXXXGDTVSGAKWAQAMVATCIACFASFAGIFLLISKRIANGIDLSHAYMFATGAILTAALIHIIPESFERFEDAELGLHDLGIHTGVTMLAGITASIIIRAVCTAGHSHTGAPATAKVVGADGSQSRG----------PTTPT--IPENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNG 400
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: D7FRW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW4_ECTSI) HSP 1 Score: 307 bits (786), Expect = 4.970e-90 Identity = 168/373 (45.04%), Postives = 249/373 (66.76%), Query Frame = 1
Query: 121 GSFESGAVYDVG-AGTNSFIVTPAEGTFEDATFAFMVVPTISADMDGLEEAEHEAEGAWEGFLEGTADPTMLASGDLATLSADVVYQISLEDPLAVVPFDITTAGAYAVFIEHG--ELPTALVSPDGEILVAG---YVEEPEXXXXXXXXLNATGTAWISAIVASLIVSVCSLVGIIVVIHKKVADGINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYAGLSVMGGISIGIVVHALVGSDHPNHGA--TVAIMKDDKAPVAGTVHSSTDVTQPSSPTGSVAESLHDLIKKRDGRALFDIKGLQAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELADFMALING 1215
G FE+ AVY + AGT+S I P E FE T AFM+VP SAD +GL AE +AE AW+ F++G D T+LASG+ A VVYQ +L++ + VVP ++T AGAYA+ +EHG E+ TAL+SP G + A +++E E +G W AIVA+ I S VGI ++I+K++A+G++LSHA+ FA+GA+LTASL+H++PE+ E + L+DLG++ G++++ GI+ +++ A+ + H + GA T +++ D G P++PT + ++L +L+++R GRALFD KGL+ +CWNVI+GD VH+F G TIGAAFLSC ST+GWT+TAS ++HE+P E+ADF+AL+NG
Sbjct: 50 GHFEAAAVYVLEEAGTHSVIAVPGED-FE-GTLAFMLVPAASADYEGLAGAEEDAEAAWDAFMDGEEDATVLASGETVIPDATVVYQTTLDESIIVVPAEVTDAGAYALLLEHGGGEVSTALISPLGTAVAASVSEFMDEEEEEEGD----TVSGAKWAQAIVATCIACFTSFVGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIVPESFERFEDSELGLYDLGIHTGVTMLAGITASVIIRAVCTAGHSHTGAPATAKVVEADGGQSRG----------PTTPT--IPDNLLELVEQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNG 404
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: D8LNP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP7_ECTSI) HSP 1 Score: 242 bits (618), Expect = 5.660e-68 Identity = 141/276 (51.09%), Postives = 185/276 (67.03%), Query Frame = 1
Query: 403 VVPFDITTAGAYAVFIEHG--ELPTALVSPDGEILVAGYVEEPEXXXXXXXXL---NATGTAWISAIVASLIVSVCSLVGIIVVIHKKVADGINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYAGLSVMGGISIGIVVHALVGSDHPNHGATVAIMKDDKAPVAGTVHSSTDVTQPSSPTGSVAESLHDLIKKRDGRALFDIKGLQAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELADFMALING 1215
++P D+ GAYA+ EHG E+ TALVS G++LV E EXXXXXXXX +AT W +AI+A++IVS+CS GI+ +I++KVA+ I LSH FTFASGALLTASLLH++PE+LEG+ ++Y+ LHD GL+AGL+++GGI I++HAL+ S H T P + T R+LFD+KGL+ VCWNVI G+LVHNFADGVTIGAAFL+C S++GWT+TAS VLHE+P ELADF+AL+ G
Sbjct: 2 MIPVDVVDTGAYALLFEHGSDEVGTALVSESGDVLVGTSEEGDEXXXXXXXXXXXXSATAAQWGNAILATVIVSLCSFTGILTIINQKVANAIGLSHTFTFASGALLTASLLHIVPESLEGIAAEYDHLHDAGLWAGLAILGGIGFSILIHALLESGHXXXXXXXXXXXXXXXXXXXXXXXXXAGTAPLALTDKE-------------RSLFDLKGLKPVCWNVIAGELVHNFADGVTIGAAFLTCGSSMGWTITASTVLHEIPQELADFIALLAG 264
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: D7FLV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV2_ECTSI) HSP 1 Score: 235 bits (600), Expect = 9.880e-66 Identity = 127/238 (53.36%), Postives = 157/238 (65.97%), Query Frame = 1
Query: 616 SLVGIIVVIHKKVADGINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYAGLSVMGGISIGIVVHALVGSDH---PNHGATVAIMKDDKAPVAGTVHSS-----------------------------------TDVTQPSSPTGSVAESLHDLIKKRDGRALFDIKGLQAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELADFMALING 1215
S G++VV++K+VA I LSHAF FASGALLTA+LLH+IPEA+EGL S Y+ LHDLGLYA L+V+ G+ + IV+H L+ S H PN + ++ P G H + DVTQP SP S ++L LI +R+GR+L D+KGLQ VCWNV+IGDLVHNFADGVTIGAAFL+CS+TIGWTVTAS VLHELPHE+ADFMAL+NG
Sbjct: 5 SFAGLLVVVNKRVAYSIGLSHAFIFASGALLTAALLHIIPEAMEGLDSSYDNLHDLGLYASLTVLSGLFVSIVIHGLMESGHSHSPNEAHSHGGGEETVRPGGGNGHHARVSDDASTMMPLGLAEGDKVSAWPGGNSPQAVQIQADVTQPPSPAESSTDNLRALIAEREGRSLLDVKGLQPVCWNVVIGDLVHNFADGVTIGAAFLTCSATIGWTVTASAVLHELPHEIADFMALLNG 242
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: A0A6H5K199_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K199_9PHAE) HSP 1 Score: 124 bits (311), Expect = 1.160e-25 Identity = 77/183 (42.08%), Postives = 103/183 (56.28%), Query Frame = 1
Query: 649 KVADGINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYAGLSVMGGISIGIVVHALVGSDHPNHGATVAIMKDDKAPVAGTVHSSTDVTQPSSPTGSVAE-SLHDLIKKRDGRALFDIKGLQAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELAD 1194
KVA I LSH FTFAS ALLT LLH+IPE+LEG+ +K++ LHD GL+AG +++ I++HAL+ S H T P + G V +L L+ +R GR+LFD+KGLQ VCWNVI G+LV NFADG FLS + V ++V+ L +L+D
Sbjct: 12 KVAHAIGLSHTFTFASDALLTTFLLHIIPESLEGIVAKHDHLHDAGLWAGPAILDRTGFSILIHALMESGHXXXXXXXXXXXXXXXXXXXXXXXXXAGTAPLALKGKVTPGNLWALVSERQGRSLFDLKGLQLVCWNVIAGELVRNFADGA-FRFNFLSAPTC----VLGAVVIISLRSKLSD 189
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: K3WD58_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD58_GLOUD) HSP 1 Score: 117 bits (293), Expect = 1.340e-23 Identity = 124/441 (28.12%), Postives = 198/441 (44.90%), Query Frame = 1
Query: 28 TTALLVLLAFAKVRSEASDTAEEEHEEHAHEGS-----FESGAVYDVGAGTNSFIVTPA-EGTFEDATFAFMVVPTISADMDGLEEAEHEAEGAWEGFLEGTADPTMLASGDLATL----------SADVVYQI--SLEDPL--AVVPFDITTAGAYAVFIEHGELPTALVSPDGEILVAGYVEEPEXXXXXXXXLNATGTAWISAIVASLIVSVCSLVGIIVVIHKKVADGINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYA-GLSVMGGISIGIVV----HALV---GSDHPNHG--------ATVAIMKDDKAPVAGTVHSSTDVTQPSSPTGSV--------AESLHDLIKKRDGRAL-FD---IKGL---QAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELADF 1197
T +LL+LLA T++ H+ A E S +E+ +++ A + A + E+ F ++ S + + A H+AE + F G + +G T+ S DV+Y++ S E P A+VP +TTAGA+ + +HG ++ D ++E ++ +W+ IVASL++S+ S VG+I++ K + + +FA+G LL + HL PE S+Y L D+G + G+ V+GGI+ + V H L+ G+DH +H + G HSS + QP + G+ A H+ K + ++L F IK L + V W IGD H F DGV + AF SCS+++GW V IVLHE+PH + DF
Sbjct: 7 TLSLLLLLALVSAAWMPLATSQHSHDHEAAEESSTASPWETATIWEFAADNYTLRFCAANDEVVEEGGMIFELLALPSTEESDADAAMHQAETIFNTFSSGQVLHQTVTTGTTLTMKTISRNSSASSQDVLYRVEFSAEQPCVDAIVP--VTTAGAFMLLTQHGGDEVSVEVMDSTNQGVSFLECHAGCDNEEEESDSKSGSWVGPIVASLVISLTSFVGVIILSFGKSRIESIVEYMTSFAAGCLLGVVVFHLYPEG-----SEY--LGDVGEWVMGVWVLGGIAFSMAVESGVHMLLSSFGADHHDHAHGGXXXXXXXXXXXXXGEDAEKGLTHSS--LQQPRAAEGNYVSHPLTPDAHHSHNDDPKLNHQSLTFSETYIKSLWFVEPVAWITAIGDFFHAFTDGVVLAVAFKSCSTSLGWAVALGIVLHEVPHRVGDF 436
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: A0A5D6YCB8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCB8_9STRA) HSP 1 Score: 109 bits (272), Expect = 5.180e-21 Identity = 111/394 (28.17%), Postives = 170/394 (43.15%), Query Frame = 1
Query: 127 FESGAVYDVGAGTNSFIV--TPAEGTFEDATFAFMVVPTISA-DMDGLEEAEHEAE-----GAWEGFLEGTADPTMLASGDLATLSADVVYQISLE-DPLAV-VPFDITTAGAYAVFIEHG------ELPTALVSPDGEILVAGYVEEPEXXXXXXXXLNATGTAWISAIVASLIVSVCSLVGIIVVIHKKVADGINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYAGLSVMGGISIGI-VVHALVGSDH-----------PNHGATVAIMKDDKAPVAGTVHSSTD---VTQPSSPTGSVAESLHDLIKKRD--GRALFDIKGLQAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELADFMALI 1209
FES +YD+ A T + V T A+ E F ++P S+ D D A H A+ + E + T LA A+ + DV+Y+ D L V + G VF EHG EL A P + E+ E +A +W + ASL++S+ S VG++V+ + + + +FA+G LL + HL PE E L E + + + AG++ I G+ +V + G+DH +H V D G V + P++PT +V + D + R + +K ++ V W +GD H F DGV + AF SCSS++GW V +VLHE+PH + DF I
Sbjct: 44 FESSVMYDLQASTYALKVCATSADVATEHGGMIFALLPLASSGDSDASAAAAHAAKIFTAFASDEVVHKNVKRNTTLAFKTNAS-APDVLYRAVFSGDQLCVEAALPVAATGVAMVFAEHGADEVSVELFDASAQPVAVLKCHSGCEDHEAEHAG----DAPSNSWWGPVGASLVISLTSFVGVVVLGLSQHRIESVVEYMTSFAAGCLLGVVVFHLYPEGSEYLGDLGEWVMGVWVLAGVAFSMAIESGVHMVLSAFGADHHHAHGGXXXXXXSHHHLVQPNPDAAEKGLGPVSLQAGPEYIAHPTTPTAAVPAASSDAKPPQSFSERYIASLKYVEPVAWITAVGDFFHAFTDGVVLAVAFKSCSSSLGWAVALGVVLHEVPHRVGDFFIYI 432
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Match: A0A6V1U7C3_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U7C3_HETAK) HSP 1 Score: 109 bits (272), Expect = 6.120e-21 Identity = 104/404 (25.74%), Postives = 175/404 (43.32%), Query Frame = 1
Query: 193 GTFEDATFAFMVVPTISADMDGLEEAE-HEAEGAWEGFLEGTADPTMLASGDLATLSAD---VVYQISLEDPLAVVPFDITTAGAYAVFIEHG--ELPTALVSPDGEILVAGYVEEPEXXXXXXXX-------LNATGTAWISAIVASLIVSVCSLVGIIVV-IHKKVAD---GINLSHAFTFASGALLTASLLHLIPEALEGLQSKYEELHDLGLYAGLSVMGGISIGIVVHALVGSDHPNHGATVAI-MKDDKAPVAGT-----------------------------VHSSTDVTQPSSPTGSVAE--SLHDLIKKRDGRA---------------LFDIKGLQAVCWNVIIGDLVHNFADGVTIGAAFLSCSSTIGWTVTASIVLHELPHELADFMALIN 1212
G + + + + V D GLEEAE H AE + + +++G+ TL D + + E+ V F+ A YA+F +H EL L G LVA E XXX L + T W I A+++ ++VG+++ + + + D I + A F SGALL+A+++HLIPE ++S + + LG AGL+++GG+ +++H + H A +K+++A VA T VH D + E +D ++ GR + ++G++ WN+++GD + N DG+ I AF C S++GW V +++ HE+P E+ DF LI+
Sbjct: 51 GDYSEESLSVFFVAVDDTDAHGLEEAEDHLAE-------DNDHEAVYVSNGNGLTLRQDELLLTLVLDNENDETVFTFETLDASGYALFFQHSPDELDFTLKDASGTTLVAELSESSTEDHDHXXXXXXXXDELEVSSTVWGLVIGANVLAGAAAMVGLVLFSLMRGMGDRTKAIAMQLATAFGSGALLSAAIVHLIPEGYALIES-FVDGEQLGTNAGLTILGGLMFSLILHMAIQHKHAAVDAEPGCSVKEERAAVAPTSTFEASPGGDDVVEMALEAEAVEGPPEAQVHVEGDSCDDECGLAATNEVGDCNDCAEEGGGRLRQGRSAVKLLAALPRVGPVRGVRPQAWNLVLGDCICNGLDGMVIAVAFAGCDSSMGWIVFGAVMSHEIPQEIGDFFVLID 446 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig101.188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig101.188.1 >prot_P-lacustris_contig101.188.1 ID=prot_P-lacustris_contig101.188.1|Name=mRNA_P-lacustris_contig101.188.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=404bp MRTSAATTALLVLLAFAKVRSEASDTAEEEHEEHAHEGSFESGAVYDVGAback to top mRNA from alignment at P-lacustris_contig101:110248..118335- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig101.188.1 ID=mRNA_P-lacustris_contig101.188.1|Name=mRNA_P-lacustris_contig101.188.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=8088bp|location=Sequence derived from alignment at P-lacustris_contig101:110248..118335- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig101:110248..118335- >mRNA_P-lacustris_contig101.188.1 ID=mRNA_P-lacustris_contig101.188.1|Name=mRNA_P-lacustris_contig101.188.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2424bp|location=Sequence derived from alignment at P-lacustris_contig101:110248..118335- (Pleurocladia lacustris SAG_25_93)back to top |