mRNA_P-lacustris_contig1008.168.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1008.168.1 vs. uniprot
Match: D7FYQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ2_ECTSI) HSP 1 Score: 128 bits (322), Expect = 1.040e-33 Identity = 76/103 (73.79%), Postives = 86/103 (83.50%), Query Frame = 1
Query: 529 IETLDDQIDVCMARRVEIDAQNAESQLIVDEAESRKRQLQEQV-----DAVKIEVEDLSTRLETRDRERKEQEMLTEVLNSAHMVFRRESPEEAASEEVRSVR 822
+E LDDQIDV MARRVEIDAQNAE QL+VDEA+SRKRQLQEQV D VK EVEDLSTRLETRD+ERKEQE+L E+L+SAHMVFRRESPEE + ++ R
Sbjct: 1 MEALDDQIDVSMARRVEIDAQNAELQLVVDEADSRKRQLQEQVGRLQVDEVKTEVEDLSTRLETRDKERKEQELLREMLDSAHMVFRRESPEEVGATSLQRSR 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1008.168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1008.168.1 >prot_P-lacustris_contig1008.168.1 ID=prot_P-lacustris_contig1008.168.1|Name=mRNA_P-lacustris_contig1008.168.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=284bp MTAAALSGGAISAAPSPLRTGSTSSRKGLGKISRKPAADNARSGGGGGTNback to top mRNA from alignment at P-lacustris_contig1008:54986..60186- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1008.168.1 ID=mRNA_P-lacustris_contig1008.168.1|Name=mRNA_P-lacustris_contig1008.168.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5201bp|location=Sequence derived from alignment at P-lacustris_contig1008:54986..60186- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1008:54986..60186- >mRNA_P-lacustris_contig1008.168.1 ID=mRNA_P-lacustris_contig1008.168.1|Name=mRNA_P-lacustris_contig1008.168.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1704bp|location=Sequence derived from alignment at P-lacustris_contig1008:54986..60186- (Pleurocladia lacustris SAG_25_93)back to top |