prot_P-lacustris_contig1008.168.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1008.168.1
Unique Nameprot_P-lacustris_contig1008.168.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length284
Homology
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BLAST of mRNA_P-lacustris_contig1008.168.1 vs. uniprot
Match: D7FYQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ2_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.040e-33
Identity = 76/103 (73.79%), Postives = 86/103 (83.50%), Query Frame = 0 
Query:  177 IETLDDQIDVCMARRVEIDAQNAESQLIVDEAESRKRQLQEQV-----DAVKIEVEDLSTRLETRDRERKEQEMLTEVLNSAHMVFRRESPEEAASEEVRSVR 274
            +E LDDQIDV MARRVEIDAQNAE QL+VDEA+SRKRQLQEQV     D VK EVEDLSTRLETRD+ERKEQE+L E+L+SAHMVFRRESPEE  +  ++  R
Sbjct:    1 MEALDDQIDVSMARRVEIDAQNAELQLVVDEADSRKRQLQEQVGRLQVDEVKTEVEDLSTRLETRDKERKEQELLREMLDSAHMVFRRESPEEVGATSLQRSR 103
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1008.168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYQ2_ECTSI1.040e-3373.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..232
NoneNo IPR availableCOILSCoilCoilcoord: 142..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..283
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1008contigP-lacustris_contig1008:54986..60186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1008.168.1mRNA_P-lacustris_contig1008.168.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1008 54986..60186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1008.168.1 ID=prot_P-lacustris_contig1008.168.1|Name=mRNA_P-lacustris_contig1008.168.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=284bp
MTAAALSGGAISAAPSPLRTGSTSSRKGLGKISRKPAADNARSGGGGGTN
NTAESRKHEAFESGNPRDAYSSVSHLKGNLDSLSFAIGLREEGGQEGALE
RLLPMLKIQPRPAGDANRRGDKTRKGFLECDHPDCILREEKIKKLQEMIN
EEQEGLELLTFEIDSLNERHARATAEIETLDDQIDVCMARRVEIDAQNAE
SQLIVDEAESRKRQLQEQVDAVKIEVEDLSTRLETRDRERKEQEMLTEVL
NSAHMVFRRESPEEAASEEVRSVRTLPAFLDYS*
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