mRNA_P-lacustris_contig995.16241.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig995.16241.1
Unique NamemRNA_P-lacustris_contig995.16241.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A6H5KTN5_9PHAE (DJ-1_PfpI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTN5_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 4.170e-97
Identity = 157/205 (76.59%), Postives = 175/205 (85.37%), Query Frame = 1 
Query:  577 TGSPALLMFSSVGGAKTEMASTP-VGVKHVLVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIPHLVDEKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEIARG 1188
            TGS   L +   G A+  MA+    G KHVLVPVADGSEEIESVTIIDTL RAGA VTVAS+G  +EVTCSRGVKI ADCKIAECE RDWDAVVCPGGMPGAV+LKEN TLE++L+KQ+SEGRI  AICAAPAVVLASHGLLEG++ATCYPA VF  KIP LV EKVV+D+NLITSQGPATSMAF+LQLV SLFGQEKA+E+A+G
Sbjct:   30 TGSGRSLAWVPGGPAEAAMAAAESAGAKHVLVPVADGSEEIESVTIIDTLVRAGALVTVASIGPEVEVTCSRGVKIKADCKIAECEARDWDAVVCPGGMPGAVSLKENETLEAILRKQNSEGRIVGAICAAPAVVLASHGLLEGKQATCYPASVFQSKIPQLVSEKVVVDQNLITSQGPATSMAFALQLVGSLFGQEKADEVAKG 234
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BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A482RT38_9ARCH (DJ-1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RT38_9ARCH)

HSP 1 Score: 216 bits (550), Expect = 2.310e-64
Identity = 107/179 (59.78%), Postives = 131/179 (73.18%), Query Frame = 1 
Query:  643 PVGVKHVLVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIPHLVDEKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEI 1179
            P   KHVLVP+A GSEE+E+VTIIDTL R GA VTVA VG  L VTCSRGVKI ADC I++C  + WD +VCPGGMPGA +L E+ TL  +L+K   + +  AAICAAPAVVLA+HG L  + ATCYP   FT KI   V ++VV D  +ITS+GP T++ FSL+LV  L+G EKAE+I
Sbjct:    9 PSVTKHVLVPIATGSEEVEAVTIIDTLVRGGAKVTVAGVGSELTVTCSRGVKIVADCLISDCANKSWDMIVCPGGMPGAQHLSESHTLIEILQKHAHDNKFIAAICAAPAVVLAAHGFLTNKTATCYPVSKFTAKIERYVSQRVVQDGQVITSEGPGTALEFSLKLVQVLYGHEKAEQI 187
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BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A6S9E808_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E808_HETAK)

HSP 1 Score: 214 bits (546), Expect = 1.300e-63
Identity = 110/191 (57.59%), Postives = 137/191 (71.73%), Query Frame = 1 
Query:  607 SVGGAKTEMASTPVGVKHVLVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIPHLVDEKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEI 1179
            S GG     A      K VLVP+ADGSEEIESVTIIDTL RAGA VTVASV   L+VTCSRGVK+ AD  IA+     +DA+ CPGG+PGA +L+++ TL +LL+ Q+  GR+ AA+CAAPAVVL +HGL+ GR ATCYPA  F   I +   + VV+  NL+TSQGP TS+AF+L LV  L+G+EKA E+
Sbjct:    8 SAGGLTYSFAIYETAAKKVLVPIADGSEEIESVTIIDTLVRAGAEVTVASVSPELQVTCSRGVKLVADKSIADAAGETYDAIACPGGLPGANHLRDDPTLRALLQAQNEAGRLVAAVCAAPAVVLQTHGLIAGRAATCYPADQFKSAIENYSTDPVVVSGNLVTSQGPGTSLAFALALVAELYGEEKASEL 198
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BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A6V1PTF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PTF7_HETAK)

HSP 1 Score: 212 bits (539), Expect = 3.840e-62
Identity = 111/202 (54.95%), Postives = 144/202 (71.29%), Query Frame = 1 
Query:  574 LTGSPALLMFSSVGGAKTEMASTPVGVKHVLVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIPHLVDEKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEI 1179
            L+GS ++  ++     K    +T    K VLVP+ADGSEEIESVTIIDTL RAGA VTVASV   L+VTCSRGVK+ AD  IA+     +DA+ CPGG+PGA +L+++ TL +LL+ Q+  GR+ AA+CAAPAVVL +HGL+ GR ATCYPA  F   I +   + VV+  NL+TSQGP TS+AF+L LV  L+G+EKA E+
Sbjct:   29 LSGS-SMATYTKSNALKMMSDATGSAAKKVLVPIADGSEEIESVTIIDTLVRAGAEVTVASVSPELQVTCSRGVKLVADKSIADAAGETYDAIACPGGLPGANHLRDDPTLRALLQAQNEAGRLVAAVCAAPAVVLQTHGLIAGRAATCYPADQFKSAIENYSTDPVVVSGNLVTSQGPGTSLAFALALVAELYGEEKASEL 229
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BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A1V1WRX5_9DELT (Dihydroxyacetone kinase n=1 Tax=Desulfobacterales bacterium S7086C20 TaxID=1869302 RepID=A0A1V1WRX5_9DELT)

HSP 1 Score: 202 bits (514), Expect = 3.940e-59
Identity = 105/176 (59.66%), Postives = 130/176 (73.86%), Query Frame = 1 
Query:  655 KHVLVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIPHLVDEKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEIA 1182
            K VLVP+A+G+EE+E+VTI+D LRRAGA VTVASV  GL+VT SRGVK+ AD  IA+C    +D VV PGGMPGA NL+++  LE LL++Q  EGR+F AICA+PAVVL  HGLL GR+ATCYP      K       +VV+D   +TSQGP T++ FSL LV+ LFG+EKA EIA
Sbjct:    3 KEVLVPIAEGTEELEAVTIVDVLRRAGAVVTVASVS-GLQVTASRGVKLVADRLIADCATNVYDLVVLPGGMPGAENLRDSPELEILLRRQQKEGRLFGAICASPAVVLEHHGLLAGRRATCYPTFATKLKSAEAAQSRVVVDDKCVTSQGPGTALDFSLTLVELLFGKEKAGEIA 177
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BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A0S7ZFK4_9SPIR (Dihydroxyacetone kinase n=1 Tax=Spirochaetes bacterium DG_61 TaxID=1704237 RepID=A0A0S7ZFK4_9SPIR)

HSP 1 Score: 199 bits (507), Expect = 4.020e-58
Identity = 101/179 (56.42%), Postives = 139/179 (77.65%), Query Frame = 1 
Query:  655 KHVLVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIPHL--VDEKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEIAR 1185
            K VL+P+ADGSEEIE+V IID LRRAGA+VTVASV DGL+V  SRGVK+ AD  I+EC +R +D +  PGGMPGA +++++  L  +LK+Q  EGR++ AICA+PAVVL  HGLL G++ATC+P   F+D++ +   VD +VV+D N +TS+GP T++ F+L+LV+ LFG EKA E+A+
Sbjct:    3 KQVLIPIADGSEEIEAVCIIDVLRRAGASVTVASV-DGLQVIASRGVKLIADNLISECVDRTFDLIALPGGMPGAEHMRDSRELTEMLKQQQKEGRLYGAICASPAVVLMHHGLLSGKRATCHPD--FSDRLENREEVDSRVVVDGNCVTSRGPGTAIEFALKLVELLFGSEKAAEVAK 178
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BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A7S1XF23_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF23_9RHOD)

HSP 1 Score: 199 bits (507), Expect = 4.360e-57
Identity = 103/178 (57.87%), Postives = 131/178 (73.60%), Query Frame = 1 
Query:  658 HVLVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIPHLVDEK---VVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEIA 1182
            +VLVPV +GSEEIE+VTIIDTL RAGA VTVASV + L+VT SRGVKI AD  I +C +  WD +  PGGMPGA NL+ +  L  LLK Q+ + +   AICA+PAVVLASHGLL  R+ATCYPA  F D++P+ +D+    VV+  N+ TS+GP T++ FSL LV  LFG+ KA+E+A
Sbjct:   67 NVLVPVGNGSEEIETVTIIDTLVRAGANVTVASVEEDLQVTASRGVKIVADKAIGDCLDSPWDLIALPGGMPGAENLRNSSDLAHLLKHQNGQDKRIGAICASPAVVLASHGLLNDRQATCYPAPQFLDQLPNPIDDDDVPVVVSGNITTSRGPGTALVFSLNLVHQLFGKAKADELA 244
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BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A1V5W8D7_9CHLR (Chaperone protein YajL n=1 Tax=Chloroflexi bacterium ADurb.Bin222 TaxID=1852858 RepID=A0A1V5W8D7_9CHLR)

HSP 1 Score: 196 bits (497), Expect = 1.210e-56
Identity = 95/175 (54.29%), Postives = 132/175 (75.43%), Query Frame = 1 
Query:  655 KHVLVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIPHLVDEKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEI 1179
            K VLVP+A+G+EE+E+V+I+D LRRAGA VTVASV + L+VT SRGVK+ AD +I +C    +D +  PGGMPGAV+L+++  L +LL+ Q + GR++AAICAAP VVL  HGLLEGR+ATC+P+     + P  V ++VV+D N +TS+GP T++ F+LQL   LFG+ KA E+
Sbjct:    2 KRVLVPIAEGTEELEAVSIVDVLRRAGAEVTVASVMERLQVTASRGVKLVADARIGDCATEAYDLIALPGGMPGAVHLRDSAELTALLRAQAAAGRLYAAICAAPVVVLQHHGLLEGRRATCHPSFEKELRNPEAVAQRVVVDGNCVTSRGPGTAVEFALQLAALLFGETKAREV 176
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BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A2D5PGQ2_9GAMM (DJ-1_PfpI domain-containing protein n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2D5PGQ2_9GAMM)

HSP 1 Score: 196 bits (497), Expect = 1.330e-56
Identity = 94/181 (51.93%), Postives = 131/181 (72.38%), Query Frame = 1 
Query:  664 LVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPA--GVFTDKIPHLVDEKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEIARGWRTT 1200
            LV +ADGSE+IE+V+IIDTLRR G  VTVASV D  ++TC+ G KITAD  I++C+ + WDAV+ PGGMPGA +L +N     L+KKQ ++ ++ AAICA+PAVV+A HG+L+G+KATCYP    +  +     + E VV+D N++TS+GPAT++ F+L LV  L G EK+ E+ +G   T
Sbjct:    5 LVGIADGSEDIEAVSIIDTLRRGGVEVTVASVMDSQQITCANGTKITADAMISDCDGQQWDAVIAPGGMPGAEHLSDNAVFTGLMKKQLADNKVAAAICASPAVVMAKHGMLDGKKATCYPGFEELLLESATMALTEAVVVDENIVTSRGPATAVTFALVLVGKLCGPEKSREVGQGMLAT 185
[Close]
BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Match: A0A4D9DGQ5_9STRA (DJ-1_PfpI domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGQ5_9STRA)

HSP 1 Score: 196 bits (499), Expect = 6.590e-56
Identity = 104/196 (53.06%), Postives = 137/196 (69.90%), Query Frame = 1 
Query:  634 ASTPVGVKHVLVPVADGSEEIESVTIIDTLRRAGAAVTVASVGDGL---------EVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGTLESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIPHLVD--EKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEIARG 1188
            +STP   K VLVPVADGSEEIESVTI+D L RAGAAVTVASV             +VTCSRGVK+ AD  I +C   +WD + CPGG+PGA +L+++  L +LL++QD   R+ AAICA+PAVVL +HG L G++ATC+PA  F   +    D  E VV D +++TS+GP T++ F+L LVD L+G+ KA E+A+G
Sbjct:   54 SSTPAAPKKVLVPVADGSEEIESVTIVDVLVRAGAAVTVASVMPSASTATLPSPWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAERLVAAICASPAVVLQAHGFLTGKRATCFPAERFVSSLARYEDGVEGVVEDGHVVTSRGPGTTLCFALTLVDRLYGRAKAVEVAKG 249
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig995.16241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTN5_9PHAE4.170e-9776.59DJ-1_PfpI domain-containing protein n=2 Tax=Ectoca... [more]
A0A482RT38_9ARCH2.310e-6459.78DJ-1 family protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A6S9E808_HETAK1.300e-6357.59Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6V1PTF7_HETAK3.840e-6254.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1V1WRX5_9DELT3.940e-5959.66Dihydroxyacetone kinase n=1 Tax=Desulfobacterales ... [more]
A0A0S7ZFK4_9SPIR4.020e-5856.42Dihydroxyacetone kinase n=1 Tax=Spirochaetes bacte... [more]
A0A7S1XF23_9RHOD4.360e-5757.87Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1V5W8D7_9CHLR1.210e-5654.29Chaperone protein YajL n=1 Tax=Chloroflexi bacteri... [more]
A0A2D5PGQ2_9GAMM1.330e-5651.93DJ-1_PfpI domain-containing protein n=1 Tax=Oceano... [more]
A0A4D9DGQ5_9STRA6.590e-5653.06DJ-1_PfpI domain-containing protein n=3 Tax=Monodo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig995contigP-lacustris_contig995:53877..59765 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.9
Seed ortholog evalue9.7e-80
Seed eggNOG ortholog2880.D7FQJ0
KEGG koko:K03152
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005911,GO:0006081,GO:0006082,GO:0006089,GO:0006457,GO:0006464,GO:0006517,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009100,GO:0009266,GO:0009408,GO:0009438,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009657,GO:0009658,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019249,GO:0019538,GO:0019752,GO:0022613,GO:0030054,GO:0030091,GO:0031090,GO:0032787,GO:0033554,GO:0034599,GO:0036211,GO:0036524,GO:0036525,GO:0042026,GO:0042180,GO:0042182,GO:0042221,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046185,GO:0046394,GO:0046686,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051596,GO:0051716,GO:0055044,GO:0061727,GO:0065007,GO:0070887,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0080134,GO:0080135,GO:0098588,GO:0098805,GO:0140096,GO:1900407,GO:1900409,GO:1901135,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1902882,GO:1902884
EggNOG free text desc.guanine deglycation, methylglyoxal removal
EggNOG OGsCOG0693@1,KOG2764@2759
Ec32 ortholog description4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative
Ec32 orthologEc-01_008860.1
EC3.5.1.124
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons6
Model size1502
Cds size1053
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig995.16241.1prot_P-lacustris_contig995.16241.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig995 54030..59469 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817426.8109026-UTR-P-lacustris_contig995:53876..540291622817426.8109026-UTR-P-lacustris_contig995:53876..54029Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig995 53877..54029 +
1693495059.8584237-UTR-P-lacustris_contig995:53876..540291693495059.8584237-UTR-P-lacustris_contig995:53876..54029Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig995 53877..54029 +
1622817426.888079-UTR-P-lacustris_contig995:59469..597651622817426.888079-UTR-P-lacustris_contig995:59469..59765Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig995 59470..59765 +
1693495059.9529338-UTR-P-lacustris_contig995:59469..597651693495059.9529338-UTR-P-lacustris_contig995:59469..59765Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig995 59470..59765 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817426.8219116-CDS-P-lacustris_contig995:54029..546501622817426.8219116-CDS-P-lacustris_contig995:54029..54650Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 54030..54650 +
1693495059.8744917-CDS-P-lacustris_contig995:54029..546501693495059.8744917-CDS-P-lacustris_contig995:54029..54650Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 54030..54650 +
1622817426.8335426-CDS-P-lacustris_contig995:55781..559341622817426.8335426-CDS-P-lacustris_contig995:55781..55934Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 55782..55934 +
1693495059.8889956-CDS-P-lacustris_contig995:55781..559341693495059.8889956-CDS-P-lacustris_contig995:55781..55934Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 55782..55934 +
1622817426.844126-CDS-P-lacustris_contig995:56386..565011622817426.844126-CDS-P-lacustris_contig995:56386..56501Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 56387..56501 +
1693495059.9010131-CDS-P-lacustris_contig995:56386..565011693495059.9010131-CDS-P-lacustris_contig995:56386..56501Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 56387..56501 +
1622817426.8554847-CDS-P-lacustris_contig995:58331..584261622817426.8554847-CDS-P-lacustris_contig995:58331..58426Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 58332..58426 +
1693495059.9121106-CDS-P-lacustris_contig995:58331..584261693495059.9121106-CDS-P-lacustris_contig995:58331..58426Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 58332..58426 +
1622817426.8664494-CDS-P-lacustris_contig995:59137..591861622817426.8664494-CDS-P-lacustris_contig995:59137..59186Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 59138..59186 +
1693495059.9259067-CDS-P-lacustris_contig995:59137..591861693495059.9259067-CDS-P-lacustris_contig995:59137..59186Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 59138..59186 +
1622817426.8778982-CDS-P-lacustris_contig995:59449..594691622817426.8778982-CDS-P-lacustris_contig995:59449..59469Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 59450..59469 +
1693495059.9365537-CDS-P-lacustris_contig995:59449..594691693495059.9365537-CDS-P-lacustris_contig995:59449..59469Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig995 59450..59469 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig995.16241.1

>prot_P-lacustris_contig995.16241.1 ID=prot_P-lacustris_contig995.16241.1|Name=mRNA_P-lacustris_contig995.16241.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=351bp
MPLGSLALSPPSPFPLPGRLPPCHFPCPALGLPHSPPTTRLLCCVFLQLR
SPTRLHNTPRIATTVVAMACLVSLVGSLPKAHGFVTSAPVAVVGRGFAAA
STATATTFARRYHRLGRYWTGAPAITTPRPTTAAATLNRGLTGSPALLMF
SSVGGAKTEMASTPVGVKHVLVPVADGSEEIESVTIIDTLRRAGAAVTVA
SVGDGLEVTCSRGVKITADCKIAECEERDWDAVVCPGGMPGAVNLKENGT
LESLLKKQDSEGRIFAAICAAPAVVLASHGLLEGRKATCYPAGVFTDKIP
HLVDEKVVIDRNLITSQGPATSMAFSLQLVDSLFGQEKAEEIARGWRTTR
*
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mRNA from alignment at P-lacustris_contig995:53877..59765+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig995.16241.1 ID=mRNA_P-lacustris_contig995.16241.1|Name=mRNA_P-lacustris_contig995.16241.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5889bp|location=Sequence derived from alignment at P-lacustris_contig995:53877..59765+ (Pleurocladia lacustris SAG_25_93)
CATCATCGGCGCTTCTGTTGGGACTCACAGGATTTTTGTGCTGTCTCCTT
CTATCCCCGCGGTCTGGAAGTTCGCGGTCTCTTGCAGGTAAGTACCAGGG
CCAGACCATTAATGTAGAATTTAACGGGCCCGACGACCTCACTCACGCCT
TTTATGCCTTTGGGTTCCCTGGCCCTTTCCCCGCCCTCCCCCTTCCCTCT
TCCCGGTCGACTTCCTCCTTGTCATTTCCCGTGTCCGGCTCTCGGGCTTC
CGCACTCGCCTCCTACAACACGACTGCTGTGCTGTGTATTCCTGCAACTC
CGATCACCTACACGCCTGCACAACACGCCGCGCATCGCAACAACAGTAGT
GGCGATGGCGTGTCTCGTGTCGCTCGTAGGGTCTTTGCCCAAAGCGCACG
GGTTCGTGACATCGGCCCCGGTTGCCGTAGTTGGCCGGGGTTTCGCCGCC
GCCAGCACAGCAACGGCCACCACCTTCGCCCGCCGTTACCACCGCCTCGG
TCGTTACTGGACCGGTGCGCCGGCGATAACAACCCCACGGCCGACAACGG
CTGCGGCTACTTTAAACAGAGGCCTGACAGGTTCCCCGGCACTGCTGATG
TTCTCCTCGGTAGGCGGCGCGAAGACGGAGATGGCGTCAACACCGGTGGG
AGTGAAGCATGTGCTGGTGCCGGTGGCGGACGGCAGCGAGGAAATTGAGA
GCGTGACCATCATCGACACCCTTCGGAGGGCCGGGGCCGCGGTGACCGTG
GCCAGCGTCGGGGATGGTCTTGAGGTAAGCATATGCAGGCAAGGAAACGA
ACGGCAGAACCGTTGGCCCTTCTGGGAAATATTCGTAACTGGCTGGCTCG
TAGCCAATTTAATTGGAACTTGAATGAGGATGCGCGCACTCGAAATACGT
TTCGTGTTTGACGGGTGCATATTTCCTGCGTAGCACGTGGAAGAATATGG
GTGGGGTTCTTTGACCCCTTTGGAGACGGAACGCTGTCCGTTTCTGTTCC
TGGCAGGGACACCACTATTCTTCGAGTGCCACTGACGTGTCTCTCGTGTT
CTGCTCGGGACGAAAGCACGGCTGTTGTTCCTTTCTCCTCCCCTTTTGAC
GTTTTGTGGCCACCGCTATCTCCTAGCACAGCAGTGGTTTCTCACATGTC
GTTTTTGCCGCGGGTCCATCCACCTTCTCTCTGTGATGGCCAGCAGTAGT
TGGAGCCTTCGGACGTGCGCGCCTCCGCAGGAAAAAACGGTGTCTGGACG
CAGCGGGCGAGGCGTGTCGCGCACGCCTACCGTTTTAGTGTTTCGCGCAC
GCCTCCCGTTTCAGTGTTTTAGTCCCTGCCCGAAAGAGGGAACGGGGTGC
GTAAGATTGCTTTCGTTTCGCTGCTTGGTCGGGGTTTCCTCTTCCTGGAC
GTACGTGCTCTTCGGTAAGAATCTAACCACGTAAGAGGATGATCCACAAA
AGGACATCGGGTGTCAAGGGCGGAAACTCATGGTCGCTCAAACGGGACCA
GAAATAGAATAAAGGGACGAACCTCACGGTGCTTTCGGTACGCTCTACGT
GAATTCAGTGCCGGCGACGGAGCTACACGCACTCGTACCGAGGAGCCAGT
GTACCCGAAAAGTGTCTGGCTAAACAAACCACGTGTTCGTGTCGGTGCCT
GTTGCGTTACCCAATGAGCGGATCAACCACCAAGCGTTGCTCGATCGTGC
ATAAGCATGCGGAGGTTGTTTGCGTGTGTCATGCCACATGGAGCCGTGGC
GGGCAAGCAACAACCGTCGACACATGTGGAACCGTGGCGGGCAAGTAACA
ACCCTCGACACCGATTAAAGCGTTGATTTCTGCCGTGTTCCTTGTTATCG
TTTGTTTTGTCTTGTCTCTCTCTCTCTCGCTGTGTTTGGGTTTTGTGTTT
TGCAGGTGACGTGCTCGCGAGGTGTGAAAATAACAGCCGACTGCAAGATC
GCGGAGTGTGAGGAGCGTGACTGGGACGCGGTCGTCTGCCCGGGAGGCAT
GCCCGGAGCGGTAAACCTCAAGGAGAACGGGACGCTTGAGAGCCTTCTCA
AGAAGCAGGTTCGATGTTATATGTAGAATTTGTTCGCTCTTTGCTGCATC
GCACGAATTGATCCCCACACCTGCAAAGGGACATCCACCACACGGTGGTA
ATGTGTGGCCGCGGGAGACTGAACCTACCGCAGGAGCTCTGCGTGTTGTC
CTCAGAAACCCACGTTGGTTCTACTCTGCCACCTGGATGTGTTTCGGGGC
GACGGGTAGACACTTTCTTGTGCTGTGTGTTCTTTCAGTGCACAGGTCGG
TCAGTGAAGAACAGGCACATACATATGCGACCGACCTGTGCCTACGCGTA
GTTACCAGTTTTTGTTGTTGTTGACAACAAACGTGGCGTACGCCACACGC
TACACGTTACTGGGAGTCGCGCTGTTGCTTTCTCGATGCTCATCATTGTT
GATGTGGTTTTACGATCAGCCCGGGGAGACTTTTCGCTAAGAAAAAAAAA
AAATGCGCAGGATTCGGAGGGGAGAATATTTGCGGCAATTTGCGCCGCTC
CCGCCGTGGTGCTCGCCTCGCACGGGCTGCTCGAGGGCAGAAAGGCAACG
TGCTACCCTGCGGGCGTATTCACAGGTATTTGACTACCAGCTTTGGAAGG
TTCAATCCATGTTTCGTAACGTATTGCATCGTATCGTATCGCATCGTATC
GAGAGAGCAAAGCAAGGGCGGGTTTGCTCCCTCTGTCGGTTGTTGCCCAT
GAGCGTTCATGATTTGCCAGGTTTTCCGAAGCCGTGAGTTCAGGGCATGT
TGTTCTCTCGTGCTTGCTTGTTTCGAGTGTTCCCTCTCTCAGGGCTGAAG
CTCTTGAAATAAAAGAAAGGAACGTGGAACCCGAAATCCCCCGTTACCGG
TGGCACGTGTTGTGTATATACCCTACCCACCGGAATGTCGAGACATGGGA
CACAGAACGTTCCAACGCGCGCTCACAGAGACTATAGGTGGTGATAGCTT
TCGGTAGATGCCCTCGACGAGTGAACACTCTCTGTATATGCTAGGTGTCC
GGTACAACAGGCGGTGCTCGTCGTGTAGTCGTGTAGTCCGTGTTCTGGAG
AGTGCTCTGGATGTGTTGATGTTGCAGTCGAGGACGGGCGCCAGACTTTT
TTGCGCACCTTCAATTGCAAAACAATCGCTTCGCGGGCATCCGTGACGCC
TTGTTTTGTGCTCGCGAAGCACCTGATGATGGCAGTACAGGGTTCGCCGT
GTGTAGTAGTGCATGCAGCGTGAAAGTGCTGTCATGGCACCGGGTGCGAT
CGCGTTTTTTAATCTTTTTTATTTCTTGTTCTTTTTGTGCACCCCCGGTG
CCATGATCACAATGGATGCGGTAACCACGATCCCGGTGCGGAAATGCAAT
CAAATGATTGCGGTCTAGCTTTGTCGAGGCACCCGGGCGCGATAACTCCG
ATGTGTGCGATACTGAAGAGTACACACAGCGGCTCTACTGGGGCAACCGT
GCTGCACACACAGGCACCCCGGTGCGATGACTCCGATGGGTGCGGTACTG
AATATCACCGCAGCGGCTTACTGGTGCCAAAGGTCACACGTTCAAGAACC
CAAGGCACATGTCGGCGAATCGAAAACGCGGCAAAATACAAAAACCAGAC
AAAATGCAAGGACAAAAGCGATGCAGTTTCCTGATGGGAGTTAACAATAT
CAGTGTGTCTTTAGCTTCTTTTTGGCTGGTGCACTTCCTGCTCTCCGTCG
TTTTGACTTCCGTAGCGAGTAGGTACCCGTGCGTATGGCGGTAATTCCAT
ATGAGTTTCTTTTGTAATCGGTTGAAGGTTTGAGTGTGTACCAATATTGA
TACCGATTAAAGTGAACACTCGACTCATCGCAATGTGTGAACGGGCAATG
CTACATACAAGAAGAGCCCCGACGATACCTCACGGCTTGCTAAAGGTACC
TACTGTATTACCCGAGACAGCTAATGAGTGGCCCGGGACAACTTCGGCAG
CACCCAATCTTGGATTTCGGTCGTGGTTATGGCAGCGGGTGAGGTAACCA
CGACCCCGGTGCGGAAATCGAATCAAGTCATACCGTTCTTCATTTTCCTA
GCGCACCCCGGTACCATATCCGCAATGGGTGACATATCCGCGCCCGGTGC
CATGACAAGCACTTTACGGTATTCGCTTTCACCTCGCGTAAACGGCTCAT
GCTCAAGTGGAAGCCGATCTTGTTGACGCGTTGGGGGCAGGGTCATGTGT
ACATGTTGCCAAGCCAACCTGCTGTTGATGCTCATCTTTGCTGGTCCAGC
TCTGATAGTTACCCATTTGCCGTGCGTCGACAAACGGACATCATATCCTA
CGATCTCGAGCCTTATGTGGGCACCACTTTTTAACATACCGGCGGCCACC
ACCAAGCGTAGTCGACCCTCCTACTCTCCCCGGCCCCCATGCCTTTCCCG
CGCAGATAAAATCCCTCACCTAGTCGACGAGAAGGTCGTGATCGACCGGA
ACTTAATCACAAGCCAAGGGCCCGCGACTTCCATGGCGTTTTCTCTGCAG
GTTTGATGCGTCGATAGTTGACAAGTGTAGCACGGCGTTTAGCCGTATCC
GTATCCCGATGAGAGAAATCTAGTGGTAGGTGTGACGGGCTTGCTGGAGC
AGAAAGGCGTGGTAGGGCTATGTCGGGGTGATTTGAGGGTGTTTATGCAC
CCGGCGATTCCGTTGTCATGGCCCAGTTGCCAACCTTAGGGTGGAGCGAA
GCAGGCAGCACGAACTCAGGCTATCGGTCTGCTGCACGTGTATGTTTTTT
GGGGTGGGCGGGTGTTGACGAACGCGCCTAAGATGAACGCTCTTTTTATA
TGCCACAGCCCCTCAAGAGTGGGGAGGATTGACCATGACCATGTTGTGAA
GTTGTGAAATGCATCGATAGAAAATCGCAGCTGTAGAATGTAGAATCACT
GCCGGGCATTAATTCATTAATTCCGGCCCTTCGGGCGCCTAGCCGAGCTC
CCTTGATTTGGCTTCGCCTGGCTTGGCTTGACTGGGCTTGGCTGGGCTTT
GAAAACAAAAACCTGTTTCATAAGAATGGGTCACCAGCCTAGGTTGGCTT
TTTGTCGTAATAAAAAGTAGCCCGTTCTGATAATTGCTGCTCTATGCAGT
TCCAGTGCGCAACGCTGTCTGTCAGTGCATACCCGAAAGACCGCCCTCAC
GGTCCCGTTCCCCACCCTTGTACCTCGCTCGTCTCTTTCTTCCGTTCTTG
CTGTGCGGTAGCTGGTAGACTCTCTCTTTGGTCAGGAGAAGGCGGAAGAA
ATTGCCCGAGGCATGCTATTCCAGTGACGGGGGAGCGGGGGAAGAACACC
CGGGCCCGGGCTGCACTTGGCACGATTTTTTTTTTTGTGTGTGACGAAAC
GTCACGCTGTTGCGGAGCTCCATATGTAGGCCCGGATTCCCACCGCGATG
TGCAGTTATTTGTCAATAGCTCCCACTGTAGTGATGATCCAAAATCTTGG
CGGGCAGCTCAGGAATCTGTGAGGAATGGCTTACACGTTGGCATCATCGC
ACGACCGCTTGGATGAAAAAAAGGTTGGCGGACAACGCGCTGAAGTTTTT
TTCAAGGGGGTGATATCTTCAGCTTTGGGGGTGGTATCTTTAGCTGTCTG
AGAGGATCTCTGGCGGAAAACGAGACCGTCGGCAGCTGTCTGGGAAACTT
GGGCTTTGGTGCCAACCCAAAATTCGGGCGGGCGAGAAGGACTTCTCTGA
TGGTAATCTATGCTGTCTCCAAGCGCTGGCTTCAGTGCACTCCCAGGTCG
GCGGACAAGCGCACGAAGATGGCCTCTGGTGCCGCTGCTCTCTTGAATTT
TGGGTAAGGGGGCCACGGAACATAAATCAAGCACGGGGG
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Coding sequence (CDS) from alignment at P-lacustris_contig995:53877..59765+

>mRNA_P-lacustris_contig995.16241.1 ID=mRNA_P-lacustris_contig995.16241.1|Name=mRNA_P-lacustris_contig995.16241.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2106bp|location=Sequence derived from alignment at P-lacustris_contig995:53877..59765+ (Pleurocladia lacustris SAG_25_93)
ATGCCTTTGGGTTCCCTGGCCCTTTCCCCGCCCTCCCCCTTCCCTCTTCC
CGGTCGACTTCCTCCTTGTCATTTCCCGTGTCCGGCTCTCGGGCTTCCGC
ACTCGCCTCCTACAACACGACTGCTGTGCTGTGTATTCCTGCAACTCCGA
TCACCTACACGCCTGCACAACACGCCGCGCATCGCAACAACAGTAGTGGC
GATGGCGTGTCTCGTGTCGCTCGTAGGGTCTTTGCCCAAAGCGCACGGGT
TCGTGACATCGGCCCCGGTTGCCGTAGTTGGCCGGGGTTTCGCCGCCGCC
AGCACAGCAACGGCCACCACCTTCGCCCGCCGTTACCACCGCCTCGGTCG
TTACTGGACCGGTGCGCCGGCGATAACAACCCCACGGCCGACAACGGCTG
CGGCTACTTTAAACAGAGGCCTGACAGGTTCCCCGGCACTGCTGATGTTC
TCCTCGGTAGGCGGCGCGAAGACGGAGATGGCGTCAACACCGGTGGGAGT
GAAGCATGTGCTGGTGCCGGTGGCGGACGGCAGCGAGGAAATTGAGAGCG
TGACCATCATCGACACCCTTCGGAGGGCCGGGGCCGCGGTGACCGTGGCC
AGCGTCGGGGATGGTCTTGAGATGCCTTTGGGTTCCCTGGCCCTTTCCCC
GCCCTCCCCCTTCCCTCTTCCCGGTCGACTTCCTCCTTGTCATTTCCCGT
GTCCGGCTCTCGGGCTTCCGCACTCGCCTCCTACAACACGACTGCTGTGC
TGTGTATTCCTGCAACTCCGATCACCTACACGCCTGCACAACACGCCGCG
CATCGCAACAACAGTAGTGGCGATGGCGTGTCTCGTGTCGCTCGTAGGGT
CTTTGCCCAAAGCGCACGGGTTCGTGACATCGGCCCCGGTTGCCGTAGTT
GGCCGGGGTTTCGCCGCCGCCAGCACAGCAACGGCCACCACCTTCGCCCG
CCGTTACCACCGCCTCGGTCGTTACTGGACCGGTGCGCCGGCGATAACAA
CCCCACGGCCGACAACGGCTGCGGCTACTTTAAACAGAGGCCTGACAGGT
TCCCCGGCACTGCTGATGTTCTCCTCGGTAGGCGGCGCGAAGACGGAGAT
GGCGTCAACACCGGTGGGAGTGAAGCATGTGCTGGTGCCGGTGGCGGACG
GCAGCGAGGAAATTGAGAGCGTGACCATCATCGACACCCTTCGGAGGGCC
GGGGCCGCGGTGACCGTGGCCAGCGTCGGGGATGGTCTTGAGGTGACGTG
CTCGCGAGGTGTGAAAATAACAGCCGACTGCAAGATCGCGGAGTGTGAGG
AGCGTGACTGGGACGCGGTCGTCTGCCCGGGAGGCATGCCCGGAGCGGTA
AACCTCAAGGAGAACGGGACGCTTGAGAGCCTTCTCAAGAAGCAGGTGAC
GTGCTCGCGAGGTGTGAAAATAACAGCCGACTGCAAGATCGCGGAGTGTG
AGGAGCGTGACTGGGACGCGGTCGTCTGCCCGGGAGGCATGCCCGGAGCG
GTAAACCTCAAGGAGAACGGGACGCTTGAGAGCCTTCTCAAGAAGCAGGA
TTCGGAGGGGAGAATATTTGCGGCAATTTGCGCCGCTCCCGCCGTGGTGC
TCGCCTCGCACGGGCTGCTCGAGGGCAGAAAGGCAACGTGCTACCCTGCG
GGCGTATTCACAGGATTCGGAGGGGAGAATATTTGCGGCAATTTGCGCCG
CTCCCGCCGTGGTGCTCGCCTCGCACGGGCTGCTCGAGGGCAGAAAGGCA
ACGTGCTACCCTGCGGGCGTATTCACAGATAAAATCCCTCACCTAGTCGA
CGAGAAGGTCGTGATCGACCGGAACTTAATCACAAGCCAAGGGCCCGCGA
CTTCCATGGCGTTTTCTCTGCAGATAAAATCCCTCACCTAGTCGACGAGA
AGGTCGTGATCGACCGGAACTTAATCACAAGCCAAGGGCCCGCGACTTCC
ATGGCGTTTTCTCTGCAGCTGGTAGACTCTCTCTTTGGTCAGGAGAAGGC
GGAAGAAATTGCCCGAGCTGGTAGACTCTCTCTTTGGTCAGGAGAAGGCG
GAAGAAATTGCCCGAGGTTGGCGGACAACGCGCTGAGTTGGCGGACAACG
CGCTGA
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