prot_P-lacustris_contig98.16122.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig98.16122.1
Unique Nameprot_P-lacustris_contig98.16122.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length150
Homology
[Close]
BLAST of mRNA_P-lacustris_contig98.16122.1 vs. uniprot
Match: A0A6H5JZJ2_9PHAE (S5A_REDUCTASE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZJ2_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.240e-58
Identity = 112/146 (76.71%), Postives = 122/146 (83.56%), Query Frame = 0 
Query:    1 MVSRQRALLKQLGTTVVLLSSLVARSDGFFAVPNAPTGYSKLPAAASDLNGRANGHGQFAARSNPSSISGGSSSAAGGAGSRQRLFETVTTLRGGSPAVKFPGYDTAAAVIAAISIPAIAWTGGPALFAQGVLLSMVTSIDGFRIR 146
            M   +RAL KQLG T VLL +L+A+S+GFFA PN PT +SKL   ASD NGR NGHGQF ARS+  S SGGSS+A G AGSR+RLFETVTTLRGGSPA+K PGYD AAA IAAISIPAIAWTGGPALFAQGVLLSMVTSIDGFRIR
Sbjct:    2 MARLRRALPKQLGATAVLLCTLLAQSEGFFAAPNTPTTHSKL---ASDSNGRTNGHGQFVARSD--SGSGGSSAALGAAGSRERLFETVTTLRGGSPAMKIPGYDAAAAAIAAISIPAIAWTGGPALFAQGVLLSMVTSIDGFRIR 142
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig98.16122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZJ2_9PHAE1.240e-5876.71S5A_REDUCTASE domain-containing protein n=2 Tax=Ec... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..149
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.517
NoneNo IPR availableTMHMMTMhelixcoord: 107..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig98contigP-lacustris_contig98:231976..232980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig98.16122.1mRNA_P-lacustris_contig98.16122.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig98 231318..238396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig98.16122.1 ID=prot_P-lacustris_contig98.16122.1|Name=mRNA_P-lacustris_contig98.16122.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=150bp
MVSRQRALLKQLGTTVVLLSSLVARSDGFFAVPNAPTGYSKLPAAASDLN
GRANGHGQFAARSNPSSISGGSSSAAGGAGSRQRLFETVTTLRGGSPAVK
FPGYDTAAAVIAAISIPAIAWTGGPALFAQGVLLSMVTSIDGFRIRSTS*
back to top