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Homology
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: D7FUY2_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUY2_ECTSI) HSP 1 Score: 371 bits (953), Expect = 1.190e-120 Identity = 183/187 (97.86%), Postives = 187/187 (100.00%), Query Frame = 2
Query: 23 MATLAKPQRAIQPLVQGARGYRKHLGQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGDADTVVNLIGKHYETKHLCFTRKEDGSINRINSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 583
MATLAKPQRAIQPL+QGARGYRKHLGQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIG+ADTVVNLIGKHYETKHLCFTRKEDG+INR+NSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG
Sbjct: 1 MATLAKPQRAIQPLLQGARGYRKHLGQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGNADTVVNLIGKHYETKHLCFTRKEDGAINRVNSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 187
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: A0A7S3HC55_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC55_9STRA) HSP 1 Score: 166 bits (421), Expect = 2.100e-42 Identity = 78/159 (49.06%), Postives = 115/159 (72.33%), Query Frame = 2
Query: 107 GAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGDADTVVNLIGKHYETKHLCFTRKEDGSINRINSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 583
G GGRSS + T VFGA GF+GR+ ++LG+ G+R +IP RGCEM++R K FDLGQ+ +S D +S+ +A+ +D V+N+IGKHYETKH+ TR+ DG+++R+N F+ VNV + +LA +K GV++F+HVSAL+AD +S S+W++TK G
Sbjct: 33 GPGGRSSNSGITATVFGAYGFVGRYFVDELGKRGSRVYIPYRGCEMEIRHLKPMFDLGQLGLMPFSPRDRESICEAVKKSDVVINMIGKHYETKHIVPTRRADGNLSRVNYDFEEVNVTIPRILAEISKEAGVESFIHVSALSADLESKSKWSRTKAQG 191
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: A0A8J2SDM8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDM8_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.830e-41 Identity = 80/162 (49.38%), Postives = 110/162 (67.90%), Query Frame = 2
Query: 98 GQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGDADTVVNLIGKHYETKHLCFTRKEDGSINRINSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 583
G+YG GGR SV+ ++FGATGFLGR+V +++G+ GTR + NRG + + R KV FD GQ PFYS D S++D IG A VN++GK+YETK + T+K DGS +R+N S++ NVDVA +A+AA+ G ++F+HVS A PDSP WA+ K G
Sbjct: 38 GEYGLGGRHSVSGVRASLFGATGFLGRYVCSEMGKVGTRVRVGNRGSDDETRHLKVSFDHGQFHAPFYSPRDAASVQDVIGRATCTVNMVGKYYETKGVVPTKKPDGSKSRVNYSYEETNVDVARTIAKAAREAGCEHFIHVSCAAQSPDSPVAWARAKAKG 199
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: A0A6U0YMP2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0YMP2_9STRA) HSP 1 Score: 163 bits (413), Expect = 3.260e-41 Identity = 88/183 (48.09%), Postives = 120/183 (65.57%), Query Frame = 2
Query: 50 AIQPLVQGARGYRKHLGQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGDADTVVNLIGKHYETKHLCFTRKEDGSI-----NRINSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 583
A+Q +V ARGYR +GQ+G GGRSSV+ VA+FG TGFLGR+V N+ G+ G+ ++ RG EM+ R K FDLG + +Y DE S+RD I AD VVNL+GK +ETKH+ T E+G + +RIN F +V+V +A +AR AK +G +N +HVSAL AD +S S W ++K G
Sbjct: 20 AMQRVV--ARGYRTAVGQFGHGGRSSVSGLKVALFGGTGFLGRYVANEFGKIGSTAYVGTRGSEMEARHLKPMFDLGNLAIYYYDGRDEDSIRDIIRGADLVVNLVGKTFETKHVVPT-DENGKLKLFGGSRINWGFDDVHVTLAERIARIAKEEGAENLIHVSALTADAESSSAWCRSKGLG 199
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: A0A7S2G5Q4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5Q4_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.130e-39 Identity = 82/167 (49.10%), Postives = 111/167 (66.47%), Query Frame = 2
Query: 98 GQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGDADTVVNLIGKHYETKHLCFTRKEDGSIN-----RINSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 583
G+ G GGRSS++ VAVFGATGFLGR+V N+LG+TGT I NRGCEM+ R + FDLG + FYS D+ S+R I D V+N+IGK YET+ L T DG+++ RIN F VN+D+ LA+ +K GV F+HV AL+ADPD+ S ++++K+ G
Sbjct: 40 GEQGHGGRSSISGLKVAVFGATGFLGRYVVNELGKTGTTVTIGNRGCEMETRHLRPMFDLGNMAIEFYSPRDDDSIRRTIEGCDIVINMIGKRYETRKLLPT-SPDGALDPIKGSRINFGFDEVNIDIPAKLAKISKEMGVDKFIHVGALSADPDAKSHFSRSKYFG 205
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: A0A836CC16_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC16_9STRA) HSP 1 Score: 157 bits (396), Expect = 6.420e-39 Identity = 77/160 (48.12%), Postives = 106/160 (66.25%), Query Frame = 2
Query: 104 YGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGDADTVVNLIGKHYETKHLCFTRKEDGSINRINSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 583
YGAG + + +FGATGFLGR+V ++LG+ R +PNRGCEM++R K F LG FPFYS DE S+R AIG++D V+NL+GK+YETKH+ TR+ DG+ +RIN F ++ + LA+ + GV+ +HVS +AAD S S WA+TK G
Sbjct: 23 YGAGRFAKIT-----IFGATGFLGRYVASRLGQLKARTNMPNRGCEMEIRHLKPMFSLGDAHFPFYSIRDETSVRQAIGESDIVINLVGKYYETKHIMKTRRADGTKSRINYGFAEIHEEWPAHLAKLSTEMGVRQLIHVSGMAADEHSDSSWARTKARG 177
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: A0A7S1TSG5_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSG5_9STRA) HSP 1 Score: 158 bits (399), Expect = 6.990e-39 Identity = 82/184 (44.57%), Postives = 110/184 (59.78%), Query Frame = 2
Query: 50 AIQPLVQGARGYRKHLGQY------GAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGDADTVVNLIGKHYETKHLCFTRKEDGSINRINSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 583
A++ GA G + L Q G GGRS+ + K V VFGA GFLGR+V N LG+ G +PNRGCEM+ R FDLGQ +P Y DE S+R A+ AD V++L+GK YETK + T++ DG+ R+N +++ N + +AR AK +G FVHVSAL D +S S WA+ K G
Sbjct: 66 ALRRAAAGAGGQVRRLSQVQKLAVGGRGGRSTSSGKRVVVFGAGGFLGRYVCNVLGQQGHVTVLPNRGCEMEYRHLHPMFDLGQAAYPLYHGKDEASIRAAVAGADMVISLVGKQYETKAMVPTKRADGTTTRVNFTYEEANAVIPATIARIAKEEGADTFVHVSALNQDAESESAWARAKAMG 249
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: A0A7S3JY87_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JY87_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.350e-37 Identity = 80/172 (46.51%), Postives = 112/172 (65.12%), Query Frame = 2
Query: 95 LGQYGAGGRSSVNDKTVAVFGAT-----GFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGDADTVVNLIGKHYETKHLCFTRKEDG----SINRINSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 583
G+YG GG SS + TVA+FGAT L R+++++LG+ G+R N GCE+++R K QFDLGQ PFYS D +SM AIG A VVN IG +YET TR+ S++ +N SF+ V++DVA LA A+ +GV+ F+HVS+ ADP+SPSRWA++++ G
Sbjct: 19 FGEYGHGGHSSNSGLTVAMFGATHTGDSAMLCRYLSSELGKDGSRLRAANHGCELELRHLKTQFDLGQYYAPFYSPRDAESMATAIGPASVVVNCIGNYYETGSAIPTRRPPDYSWRSLSTVNYSFEEVHIDVARRLAEVARVKGVETFIHVSSSLADPNSPSRWARSRYQG 190
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: A0A7S1UWU6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWU6_9STRA) HSP 1 Score: 150 bits (379), Expect = 3.020e-36 Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 2
Query: 47 RAIQPLVQGARGYRKHLGQYGAGGRSSVNDKTVAVFGATGFLGRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQSMRDAIGDADTVVNLIGKHYETKHLCFTRKEDGSINRINSSFKNVNVDVAGMLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAG 583
RA+ R + + G GGR+S D VA+FGATGFLGR+V ++LG G +I NRG EM+ R KV FDLG+ F FYS D +S+ D I DAD VVNLIGK++ET T+ + N SF + N++V M+A+ K V N +HVS+ AA PD+ S WA+TK+ G
Sbjct: 37 RALSTQTVLPRVVERRANEAGPGGRASNADLKVAIFGATGFLGRYVCSELGANGVLAYIANRGDEMEARHLKVCFDLGRTRFVFYSPRDRESVEDVIADADIVVNLIGKYHETGQPVETKSFPYIGYQTNYSFADANIEVPSMIAQVCKDLQVDNLIHVSSAAASPDASSEWARTKYLG 215
BLAST of mRNA_P-lacustris_contig978.16096.1 vs. uniprot
Match: W7TQ12_9STRA (Nadh dehydrogenase (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ12_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.340e-36 Identity = 83/193 (43.01%), Postives = 116/193 (60.10%), Query Frame = 1
Query: 577 RGELAVREAFPEATIVRPAKLFGNNDRFLTWIAEISNTTGRVPLVNDGDNLIQPIDARDVAKVMMAIIDDPENVDYRGKLVELAGPGEFSWREVADLVMDTTHRAGATDVDGMSMMFARGYGMLLELLPNPLFTEDEALAMSVDVVLKPNPDALTLEDFNITKPFKMEECAINIVRRFCRVQ--HFGFVKGYH 1149
+GE A++ FP ATIVRP +LFG DR L W A+ + + G +PL N G+ L+QP A DV M+ II+DPE DY GK ELAG F+WRE+ D D T++ +++ +G L LPNPL T D+A MS DV+L+P+ A+T +D +I KP +E+ A N + R+ R HF + +GYH
Sbjct: 87 QGEEALKSVFPRATIVRPGRLFGPEDRLLNWFAQNAASFGVIPLFNGGNALLQPTYASDVVDAMVKIIEDPE--DYEGKTFELAGEHNFTWRELMDFTFDITYQKPRVVDLPLAVGEMAAFG--LSQLPNPLLTIDDAKLMSTDVILEPSSSAMTFQDLHI-KPTPLEKVAFNYLYRY-RTDGGHFPYAEGYH 273
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 180.3 |
| Seed ortholog evalue | 1.1e-42 |
| Seed eggNOG ortholog | 44056.XP_009033150.1 |
| KEGG rclass | RC00299 |
| KEGG ko | ko:K01593,ko:K03953 |
| KEGG TC | 3.D.1.6 |
| KEGG Reaction | R00685,R00699,R00736,R02080,R02701,R04909 |
| KEGG Pathway | ko00190,ko00350,ko00360,ko00380,ko00901,ko00950,ko00965,ko01100,ko01110,ko04714,ko04723,ko04726,ko04728,ko04932,ko05010,ko05012,ko05016,ko05030,ko05031,ko05034,map00190,map00350,map00360,map00380,map00901,map00950,map00965,map01100,map01110,map04714,map04723,map04726,map04728,map04932,map05010,map05012,map05016,map05030,map05031,map05034 |
| KEGG Module | M00037,M00042,M00146 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009628,GO:0009651,GO:0009987,GO:0016020,GO:0016491,GO:0016651,GO:0019866,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0050896,GO:0051186,GO:0051188,GO:0055114,GO:0070469,GO:0071704,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901004,GO:1901006,GO:1901576,GO:1901661,GO:1901663,GO:1902494,GO:1990204 |
| EggNOG free text desc. | NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9 |
| EggNOG OGs | COG0702@1,KOG2865@2759 |
| EC | 4.1.1.105,4.1.1.28 |
| COG Functional cat. | GM |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko04147 |
| Exons | 8 |
| Model size | 1842 |
| Cds size | 744 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817409.018569-UTR-P-lacustris_contig978:60413..61268 | 1622817409.018569-UTR-P-lacustris_contig978:60413..61268 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig978 60414..61268 - |
| 1693495045.5884902-UTR-P-lacustris_contig978:60413..61268 | 1693495045.5884902-UTR-P-lacustris_contig978:60413..61268 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig978 60414..61268 - |
| 1622817409.035114-UTR-P-lacustris_contig978:61683..61881 | 1622817409.035114-UTR-P-lacustris_contig978:61683..61881 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig978 61684..61881 - |
| 1693495045.6062822-UTR-P-lacustris_contig978:61683..61881 | 1693495045.6062822-UTR-P-lacustris_contig978:61683..61881 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig978 61684..61881 - |
| 1622817409.0496945-UTR-P-lacustris_contig978:62204..62227 | 1622817409.0496945-UTR-P-lacustris_contig978:62204..62227 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig978 62205..62227 - |
| 1693495045.6145437-UTR-P-lacustris_contig978:62204..62227 | 1693495045.6145437-UTR-P-lacustris_contig978:62204..62227 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig978 62205..62227 - |
| 1622817409.1487875-UTR-P-lacustris_contig978:69504..69526 | 1622817409.1487875-UTR-P-lacustris_contig978:69504..69526 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig978 69505..69526 - |
| 1693495045.6822402-UTR-P-lacustris_contig978:69504..69526 | 1693495045.6822402-UTR-P-lacustris_contig978:69504..69526 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig978 69505..69526 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817409.0649066-CDS-P-lacustris_contig978:62227..62285 | 1622817409.0649066-CDS-P-lacustris_contig978:62227..62285 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 62228..62285 - |
| 1693495045.6244063-CDS-P-lacustris_contig978:62227..62285 | 1693495045.6244063-CDS-P-lacustris_contig978:62227..62285 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 62228..62285 - |
| 1622817409.0779428-CDS-P-lacustris_contig978:62677..62811 | 1622817409.0779428-CDS-P-lacustris_contig978:62677..62811 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 62678..62811 - |
| 1693495045.63508-CDS-P-lacustris_contig978:62677..62811 | 1693495045.63508-CDS-P-lacustris_contig978:62677..62811 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 62678..62811 - |
| 1622817409.0910985-CDS-P-lacustris_contig978:63394..63517 | 1622817409.0910985-CDS-P-lacustris_contig978:63394..63517 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 63395..63517 - |
| 1693495045.6480591-CDS-P-lacustris_contig978:63394..63517 | 1693495045.6480591-CDS-P-lacustris_contig978:63394..63517 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 63395..63517 - |
| 1622817409.1054182-CDS-P-lacustris_contig978:63914..64062 | 1622817409.1054182-CDS-P-lacustris_contig978:63914..64062 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 63915..64062 - |
| 1693495045.6565263-CDS-P-lacustris_contig978:63914..64062 | 1693495045.6565263-CDS-P-lacustris_contig978:63914..64062 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 63915..64062 - |
| 1622817409.1201673-CDS-P-lacustris_contig978:64489..64595 | 1622817409.1201673-CDS-P-lacustris_contig978:64489..64595 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 64490..64595 - |
| 1693495045.6652186-CDS-P-lacustris_contig978:64489..64595 | 1693495045.6652186-CDS-P-lacustris_contig978:64489..64595 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 64490..64595 - |
| 1622817409.1342602-CDS-P-lacustris_contig978:69329..69504 | 1622817409.1342602-CDS-P-lacustris_contig978:69329..69504 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 69330..69504 - |
| 1693495045.6735964-CDS-P-lacustris_contig978:69329..69504 | 1693495045.6735964-CDS-P-lacustris_contig978:69329..69504 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig978 69330..69504 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig978.16096.1 >prot_P-lacustris_contig978.16096.1 ID=prot_P-lacustris_contig978.16096.1|Name=mRNA_P-lacustris_contig978.16096.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=248bp
MATLAKPQRAIQPLVQGARGYRKHLGQYGAGGRSSVNDKTVAVFGATGFL GRFVTNQLGRTGTRCFIPNRGCEMDVRRTKVQFDLGQVVFPFYSSSDEQS MRDAIGDADTVVNLIGKHYETKHLCFTRKEDGSINRINSSFKNVNVDVAG MLARAAKAQGVKNFVHVSALAADPDSPSRWAQTKFAGNWRYGKRSQRRRS SDRPSCSGTMTAFSLGLRRFPILRAACHWSTTGTTLSSPSTRATWRK* back to topmRNA from alignment at P-lacustris_contig978:60414..69526- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig978.16096.1 ID=mRNA_P-lacustris_contig978.16096.1|Name=mRNA_P-lacustris_contig978.16096.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=9113bp|location=Sequence derived from alignment at P-lacustris_contig978:60414..69526- (Pleurocladia lacustris SAG_25_93) GCGACGACACACTCCGAAGACTATGGCGACCCTGGCAAAGCCTCAACGCG
CAATTCAACCGCTTGTGCAGGGCGCGCGAGGGTACCGGAAACACCTAGGC
CAGTACGGAGCGGGCGGCCGAAGCTCTGTAAATGACAAGACCGTCGCCGT
GTTCGGTGCGACCGGGTTCCTGGGCCGCTTCGTGACGAACCAACTGGGTA
AGCAGCAAAGCGCAGAGCAGGGCTGTAGCTGACTGTGTTCATTTCGAGGT
TATATCGCACATTTTATGTGTTCTTTATTTCGTCGTGCGCTCCGGTTGGC
GGGTGCAATAAGAGTCTTCGAGCATGCTTGTGTCAGACGAGACGCGTATA
GTGGGCACAATGGGCTCTGAGATGCAACCCTGTTCGTTCTGTGCGCCCTC
TTATGCGTTTGTTGTTGCGATAGAACGATTCACATGGCATTCGACCCTGC
GTGCTTTTTCGGATTATTAGCCTGCATTAGTGTTGTTGGAATTATGTCCA
GGGGGGGCTTGGGGAATAAATGTACATTCCCTCCATCTTGTGCTTCCTAT
AGTATCATAAGACTACGTGACTTTACAGGTTCTCCACTTACAGCAGTAGA
TTTAGGCAGGAGGTGACAAGGAGAAATGAAGGAGCATGTAGAGATATCTG
ACTGGGGCTGCGAGCGGGCTCGAAATGCGTGAATGAATTGGAGCCGATGG
TGGTGTTGGCAGAAGAACAGATGGCGACACAGTGACACTGCAAATTTTGG
AGGTGCACAGGACGCACGATTGACACCCTCCTCCCCAGGGCGCGGCACAC
ACTTGTGCCGTGCACCAGGGCACCTCGCGCGATGCCTCGCGACGGTTGTT
TGTTATTTGTGACCTGACCGTAGTCCGGTGTTCATACTGGCTGTGGTTTC
TAGAATGCACCCACCAAATCTTTCGAGCCACTTGTGTCGTGCACAAACCG
CTTTGATTTTCCCCCTACGAGTAAAGTGCTCAAAACCTTGATTTGCCCCG
GCAAGAGGTCGGCTCTGAAGTGCAGAAAGTCCACACCTATCACACCCTCC
CCCACCCCCTTCCCTCCGTGATTTTTGGGCTTATCCCGGTTTGGTAAATG
ATACTCCGAGTATAGGTTTTAGAGTACCGTTCTCTAAATCCTACTGAGTA
TATAATATGATTATATAGGTTTTAGTCCATGTATTCTAAATCCTAAATCC
TATTCTAAAGGCGGGTAGGTTTGAGAAGCAGCGTGTGTGCGTCCGTGGGT
GAACGCTTGTGTGCTTCTCAACTAACTGCGTTAAGCCGTATGTTGCGGGC
ACACCAGTGGTGCTGGCGGCAGCTGGATCGCCAGCTGTGGTGCAGTTCCC
AACTTCTTTTTTCGCAATACATAGCCGAACCGGATCTCCAGAGAGAGCTG
GAGAAAAAAAAAATGCTGTCACTGATTTGGTGAAAATGCCCAACGCATCA
TTTGATGATGTCAAGTGCAGAATACTTGGCACAGAGAGTACCAAAGCGAT
GCTGCTCACAACGGGCCACAGAGGGGCTGTGTAGTAGGTATCTCCAAGGG
TACTTTAGGACAGAGTGGTGCTGCGTCAGGAGTAGTAGTGTGTGGCTCTA
CAGCAGTCAGTGTGGGCTGCTGGATACATACGCTTGGAGCACAGGCAAGG
CCCTCTCTGTCGCTTTTCTGGTCTCTGTCGCTTATTTGCTGTAGAGCTAC
AAACAACACCACTACTATGCCCTAAAAGTACGCTTGCTTGGAGATACATA
CCTACACAGCCCCTCGGTGGCCCGGCATCAGCAGCGGTTTGTATACTCTC
TCTCTGCTCTGCCTGTCCTCTTCAGCTAGCTCTCCTCTCTCTCTCTCCTG
TGCGCTTTGTACTCTCTCTGCTCTGCCTGACTGCACAGCTCTCTCTCTCT
CTCTGTCAAGCATACCTGGCGAACCAACTTATCGTGTGTCTGCACTCCGC
TCTATGCACACGTTTGACGTCCTTGCTCGCCCATTTCGGCACGGGTTGCA
GGATAACAAGCAGCAATAGCTCGAGCTAGCGCTTATGATCAGTTCAAGCC
CTTGGTTGCGCCGATGTGTGGCGAAATCGTCGCGTTGTGAATCAAAACGT
GGGTCTATTTTTTGCGAGGACAGACACACAGAAACACATCAACAATTAGG
TATCATCAGATTTGCCCTCCTGTGGCAGGATTTTTTTTTTTCACGCACCC
CCACAGTCCCGCGATGTCGATATGAATTCGAAGCTATGCTTCACGCTGAA
GCGCGAAACATACCGGCTCGCTTCGCTCGCCGGCTGCTTCTCAATATAAT
GTGAGTACCCGGTGTCTTTGGGAACCCGTAGTTCTACTTGGGAACCCGAC
TAACCCGCATCGTTCTACGGAACGCCGCTCATACTGTGTATGAACTCATA
CTTGTACTTTATCGCACGTGCGTACTTTCTCCGCACATGTGAATGAGAGC
CTGTCAGCCGTTGGTTCATACATATCCCTGTCCTGTCAACTGCTATAACG
TCAGCAAGCCACCTCAGAGTGGCGGGCGATTGCACCACGTGGTGTGTACC
ACGTCAGGCGTGTCTGAGCTGGTGCGGTGCTGTAATGCACCGCCCCGCTC
GCCCACTCGCCCTTCCTGTCACAATAACTGAACCCAGAGACACGTCATCC
TTGCCTCTTCCTAGAGCACTCTGTCTTTCGTATGCCCTTCCAGCACACTC
CTTCACCACTGCTCCCGAGAGGGCTCTACTGTCACCCGTCTGTCCGAGAG
CTGTTGATTCACACACCCCTGTGGCTTGCCGAGCAGACACTCTTGATAAT
ATGATTTTATATACTAGTAGGTTTTAGTACGTACTCTAAATCCTTTTTGT
ATGGCATACTAAACCCTATATAATAGACCCCCTCCCTCCTCCTTTTTTTG
GCTTATCACGGTTTGGGTACGATAAATGTGGGTTTTTGCGCTCCAGCCCA
CCTCTTGCGGTGGGCTGGAGCGCAAAAACCTACACCCAACATCTAAAACC
GGGATGAGCCAAAAAAGGAGGATGCGGGGGGAGGGGGTCTGTTTAAAATC
TATTAAAGTGTAATAAAAATCGACCAAATGGGTCTCTGATAATGTACGTA
TGCTTTCCCTCGGACTACTACTGTTGTTGTACAACAAAAATGCGATGCTT
AAGTAAAAAATGTAGTACTGACACCGGTCTTTATAGGACAAAATATTATC
CCTGCAAATCTCATTGTTTTCGACCCTTTGGGCGGTCTGCCTCGCGAACG
ATTCTGAATCAGCTGTTGGGTCGTCGGGAAAAGTCATCCAGTTCATTGGT
GTGTGCACAGATCGCCTATTTGCTCAGCCTGGATCTGGGTTTGAATTTTT
CAAGCCGAGCAACATTTGTCAAAAGTCGCCAAGACTTTGAAGAAAAGTAG
CCAAAAAACAAATCTTGGGCCCAACATTTGCTTTTACAGTAAGGCACTTC
TCTTGCAATTCTTGGAATTTTTCGCATATCTTGCTCCGCTGAAAAAGTTC
AAACCCAGACCCAGGCTGAGCAAATAGGCGATCTGTGGACACATCAATGA
CCGGGATGACTTTTACCGACGACCGAACAGCTGATTCAGAATCGTTCGCG
AGGCAGACTGCCCAAAGGGTGGAAAAAAACAAGATTTGCAGAGAATATTT
TGTTCCTATAAAGACCAGTTTCGTACTTTATATTACTAGACTTCATCAAT
GTACTCCATATAAAACGGTAGATGTCTCTCATGCAGACACTACGAGGTGT
TCCTGTGGAGGTATAGTAAACACGACATAACAGAGGGTTTCTCCCCGATA
TTTTTGTCGTAGACCTAGCCGAGATCTGCAGGGAAGTTTTATAGGATGAT
TCCCGTACAGGTGTTTTTGTTCCGGCCGCACAGCGTTAAGACTTCAACAT
ATACAAGAAATCAGTAGGCGGCAGGCATCATTGAAACATTCACTGCTGTT
GTAAAGACTATGAATTTGAACAGCCATTTGCGGGGGACTTCCCAAATGGT
AGTTTTTCTTTAATTTTTTTTTTTACTAACATTTCTATATAGGATGCAGA
GGAGCCATCTATTTTAGGTTCTAGTATGTCTATACTATATCCTATACAAA
ATTTTTAATAGGATTTAGTATATCGATACTAAATCCTATATAATTACCAA
ACCGGGATAAGCCCAAAAACTCACGGAGGTGTGGACTTTTTGCACTCCAG
CCTACCCCTTGCCCCCGGGGAAAAAGGGAACAGCGAAAAAAAAAAAAATG
CCCCCCTTTATCAATTTCGCCCCCAGGTAGTGTTTTGTGTTTTCCGACGA
GTTCCTTCCCGGGGTAAGGCCAATTTTGGTTTATCTTGGCATCAGTTCGA
AGCAAAAATACTCCGCTTTTGACACCGAGTACGCCATTTTCATCAGGCAC
TGGAGAAAATGAGTGTGAAACAATGAACGGATGTATGCAAGTAGACATGC
AACGTCGATCTTCGAGTGTTTTTATGGCATGTTTCATCTTTTTGTGTGTT
TTTTAGGCGCTTACACCTTCACCCCGGGTTTTGTTATTGAACCCCCTTAT
CAATTTAGACCCCGGGGGCATGATTTCAAAACGGTTAGGATCCCATCTCC
GGGGGAAGTCAAAGCGTTTTACGGTATTCAGAGCAACACTGGACAGCAGG
AGTTCAGCCTTAGACTCTACACCAAGAGTAGGCGGCGTCTGCGAGGTATG
CCGCTGTAGTTTTACACGAAACAAGTGCTTGACTGCTTGTGTGAGAGACA
AAAAGGGTGCTTTTTTTTCAGCAGGTCTAGGTCGATGGATGAGAAACATT
TGTCCCCCCTCCTCGACACTCACTCCTATTCCGTTATTTGCGCCAGTGCG
GTCCACAAAGCATTCGCTTCGCCTAATTTCCGTCGGAACCCACGACTTTT
CCGCCGTTGCCCCCCGCCCGTCTTTTGTCAGGGAGGACGGGCACGCGTTG
CTTCATTCCCAACCGCGGTTGCGAAATGGACGTACGCCGCACCAAGGTTC
AGTTTGACCTGGGTCAGGTGGTTTTCCCTTTCTATAGGTACGTCGCATGA
AGTGCGTCCCGCTAACAAGGATTCTTGCACGACAACTGCTCTCCACACAA
AACTCAAAACAAGGCGCTCATATCTGAAACGTGTCGATCTCTATTGCAGT
TATCACGCACAGTTGGAGCGCCACAGACGCCTTCAATTTAAAGTTCATGC
CGTATCCTCTTGAACACCAACTTGTGTGCTATACCTATCTGTGTGTGTAT
GTTTCTTCGACAAGCACCGACAAGCTGTCAGATCCGTGGGTTCCCGAAAC
AGGGGGCAGCGGGGGGTACTTGACGGAATTTTCTACCCGTCGGGTACATG
GACTATCGGGGTGGTATCTACTCATAGAAATAATGTGGTAGCATCATTCA
CCCGGAGTTGATAGCTCCATGTTTGTGTTCGCCTTGTGTTTCCTCGATTT
TCCCATGTGAGTAGCTCGTCGGACGAACAGAGTATGCGCGACGCCATCGG
AGACGCCGACACGGTGGTCAACCTCATCGGCAAGCACTACGAGACCAAGC
ACCTGTGCTTCACGCGAAAGGAGGACGGCTCCATCAACAGGATCAACAGC
AGCTTCAAGAACGTGAGCAAATTTCCTTGGTTCTGGCTGTCCCACACTGC
TGTGGATTCGACGGTGAATGTGTTGCCCTAGATGAGCTAATGCTACGGAC
GATCTAGATCCACAGATAAATATTGTCAACATCAAAGCCCACATCATAGC
CCATCAAGAAGGAGCGGCGGTACAGCAGCAGAGACATCGTATACCCTAGC
ATATTCGTTGCCCCCTCTGACGTGTGTTTGTGCTACATGTGCTCACAGCG
TAACACCTGCCCCCCTGCCTTCTTCCTTGAATGGCATCGAGGCAACCCAA
GATGTCACCTCACCTCAATTCCATTTACCTCTTTGTTGTCATCTCTTTCC
CTATGTTTCGTCGTTACCGGCCGTGCCGTAACCTCGTGTCCATGTGCTCT
CTCGATAAGGTGAACGTGGACGTGGCCGGTATGCTCGCAAGGGCCGCTAA
GGCGCAGGGAGTGAAGAACTTCGTGCACGTCAGCGCGTTGGCAGCGGACC
CAGACTCACCCTCACGCTGGGCTCAGACCAAGGTATGATATGTGCACAAC
AGTGGGAACGGAAGGGTTATTGCTCGTTTGCTGCGCGTTTCGGCTTTCCC
TACCCGGAAAACGTCTACCCTAGCAAGACCTGGTTCTTGTTGCGGTGTGT
GGAGCCTCGGTGGTGTTCTGAGGCATTGGGAGGGGCTCGTGTTGCGCTTG
CTTTCATTGGGTTATCTCATCCCCCACATATACTGCGAGAGTAGGGGACA
TTTCCTCCACACCTCTAATTTTCAGGCACGGATATTGTTCAGCTCTCTAA
ATATTCTGATTACGGTACATCGTGGCTCTTATATGTAGGCTCGATCCCGC
TATCGCTATCCGTGTGATCTATCTCTCTCGATCCCTTCTCTTCTTTTCAG
CGCTTTTGGAGACGGCTCTAACTTGGCGTTCTTGTTGCTTTTTGGCCTCG
TATTTGCGTTCGTTCATCTCCGCTTTTCCTCCCTCACTCTTCTATACACC
GTGTCCCGAGTTGTCGTGGGTGTGGGTGGTCCCCGCTCGTTTGTGTTGCG
TCAACTGACTGCTCTGGCGGGGGGTTTGCTCGCTCGCGTGATATTTTCGC
TAATCATTTTGTTAGTTCGCGGGGAATTGGCGGTACGGGAAGCGTTCCCA
GAGGCGACGATCGTCCGACCGGCCAAGCTGTTCGGGAACAATGACCGCTT
TCTCACTTGGATTGCGGAGATTTCCAATACTACGGGCCGCGTGCCACTGG
TGAGTTCGCCCTACGTTATCCGTGTTTTCGCAGCGGCGAATTTCGATTTC
GAGAGATTGTAGGGCTATCTCGTTCTTCCATATGCAATACTAATGCATAA
CCTTGCATCGGTAGGTACCTTTACCGTACTTGATTCGAAGTTTTCGTGTC
TGGGTCAGGGGTAAGCCAAACGCAAATCCAGGTGGCTCCACGCACAACTT
GACTGGCGTCACTGCTGTCATTTTGTCGCGGAGTGTTTCACCCTCCTGGG
CATCTTGAAACGACCCGCACGGTACACCACGGTACAATCCCATTCCATTC
CCACCCTCAGACCCCGCGAGCATGATTTGCGTCACATCCTTCCAGCACGT
TGCTGACGACGTTAACTGTCTGCCTCTCGTGTTTTGTGCAGGTCAACGAC
GGGGACAACCTTATCCAGCCCATCGACGCGCGCGACGTGGCGAAAGTGAT
GATGGCGATCATCGATGACCCGGTGAGAAAACACATGGGCAAGAGGCGTC
ACACTGTATCGTTTGCCCTCCTGTCTGGCTCCAAAGTACGCAGCGGAACT
GTTGTTTGCTGTACTGCCACCGCTGGCGCTCTTTGTTCCAAGTATTATTT
CTCCAGAACACCTTGTGAAGAACTTTCCGAAGAGCCGATACCCGGAGCCC
CATGGCTCCGGCACGACTCGCGCTGCACCTCCTTGAGCTGCCCTCTCCAC
TCCCGCTTCCCCTTGCTGCTGCCCTCGCCATTCCGCTTGGACGTCCTAGA
TGCCTAACCTCCGCCCCGCCCGCTCCCCCATCCTCCCGTTGGTAGGAAAA
CGTGGACTACCGCGGCAAGCTAGTAGAGCTGGCGGGCCCAGGAGAGTTCT
CGTGGCGGGAAGTGGCCGACCTGGTCATGGACACGACGCACCGGGCGGGG
GCGACGGACGTGGATGGCATGAGCATGATGTTCGCCAGGGGGTACGGGAT
GCTCCTAGAGCTCCTCCCCAACCCCTTGTTCACGGAGGATGAGGTGGGAA
GCAGAGACGGCGGTGGGCGCGCGAATGAAATGTCTGCCACGGAAGCTGTT
ATGTTTGCTTCGATTGTGTTGGCCTTTAGGGAGTAAGGGCGGGGTTTTGT
TTTGTTGTTCTTGTACGACAGCAGGTATATGGTTTATGCTTCGATAGACA
TGAGGCGCAGTGCTTGATTTGATGCCATCCATCATGGAATGAATCGAAAG
CGCTTGAATCGAAATCATAGCCACGTTGACACCAGGCGAACCGTGCCCCT
CCGCCATGCATACATGGGCCTTTTTTTTTCGTTTCGATTCTTTCATCCTC
ACATGTCATCGTAGAACGGCACTGAGCAGCAGATTGCGGCAGAGCAATTG
AACCACCTGGACGTCAAGTTATTTACGCTGCGCTGTTTTGTCTTGTGTCG
TGCTGCAGGCCCTTGCGATGAGCGTGGACGTCGTACTGAAGCCCAACCCT
GATGCTCTGACGCTCGAGGACTTCAACATCACGAAACCCTTCAAGATGGA
GGAATGCGCCATCAACATCGTTCGCCGATTCTGCAGGGTGCAGCACTTCG
GATTCGTGAAGGGATACCACTGATATGATCTGATGGCTAGCCTGGTTCGG
CCTGGCGTCGTTCATTGCAGCGTTAGCTCTTTGTGGTGGTGCGATTCTCT
AGGTTCTCCACGGGAGTCCGCCGTCTTTGTGGCTCTGTTGTTTAATTTGA
TCCTTTTTGTTGTCGGCAAGAGACGGGCTGAGGGGTTTGAGAAGGTGCAC
GGTTGAGCAAGTTTATTGTCTTCGCCTTGGCATCATTAAGAAGGCGGTCG
ACAAAAAGGTCCTGGAGCAGAGTGGTCTCTTGCTTGCGCTCAATTTCTGA
GTGCCTGCTCCTATGGTCTCTGCTCTACGCTAGTGTGTGAGGTGTGTACT
AGTTCGTCGCTTGCCTTGGTCATTTGACCGTTGACCTGCATCCTCTACAT
TCGGATTACAGCAGACCTGGCTGGCAGTGACCTGTGTTGCTTTTGGTTTA
TCGAACCCAAGAAACTTCGTAGAGTTGGCTTTTATCAGTTGGGAGAAATC
AGATTTTTACTCATGTGGATATAATATCTAAACAGTAGTCCAACACTGCA
GCTCGGAGGCCAACTTGGGTGGCACCCCTGGATTATCTAGACACGGAGCC
CCCAATTTGAAGCAAATCCAACATAAGTAACTTCGAACTACGAAGTTACT
TTTCATTCGTGGACTTTCATTCGTGAAAGCATAAGCATTTACCACTTATT
TGTACCACACGGC back to topCoding sequence (CDS) from alignment at P-lacustris_contig978:60414..69526- >mRNA_P-lacustris_contig978.16096.1 ID=mRNA_P-lacustris_contig978.16096.1|Name=mRNA_P-lacustris_contig978.16096.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1488bp|location=Sequence derived from alignment at P-lacustris_contig978:60414..69526- (Pleurocladia lacustris SAG_25_93) ATGGCGACCCTGGCAAAGCCTCAACGCGCAATTCAACCGCTTGTGCAGGG CGCGCGAGGGTACCGGAAACACCTAGGCCAGTACGGAGCGGGCGGCCGAA GCTCTGTAAATGACAAGACCGTCGCCGTGTTCGGTGCGACCGGGTTCCTG GGCCGCTTCGTGACGAACCAACTGGATGGCGACCCTGGCAAAGCCTCAAC GCGCAATTCAACCGCTTGTGCAGGGCGCGCGAGGGTACCGGAAACACCTA GGCCAGTACGGAGCGGGCGGCCGAAGCTCTGTAAATGACAAGACCGTCGC CGTGTTCGGTGCGACCGGGTTCCTGGGCCGCTTCGTGACGAACCAACTGG GGAGGACGGGCACGCGTTGCTTCATTCCCAACCGCGGTTGCGAAATGGAC GTACGCCGCACCAAGGTTCAGTTTGACCTGGGTCAGGTGGTTTTCCCTTT CTATAGGGAGGACGGGCACGCGTTGCTTCATTCCCAACCGCGGTTGCGAA ATGGACGTACGCCGCACCAAGGTTCAGTTTGACCTGGGTCAGGTGGTTTT CCCTTTCTATAGCTCGTCGGACGAACAGAGTATGCGCGACGCCATCGGAG ACGCCGACACGGTGGTCAACCTCATCGGCAAGCACTACGAGACCAAGCAC CTGTGCTTCACGCGAAAGGAGGACGGCTCCATCAACAGGATCAACAGCAG CTTCAAGAACCTCGTCGGACGAACAGAGTATGCGCGACGCCATCGGAGAC GCCGACACGGTGGTCAACCTCATCGGCAAGCACTACGAGACCAAGCACCT GTGCTTCACGCGAAAGGAGGACGGCTCCATCAACAGGATCAACAGCAGCT TCAAGAACGTGAACGTGGACGTGGCCGGTATGCTCGCAAGGGCCGCTAAG GCGCAGGGAGTGAAGAACTTCGTGCACGTCAGCGCGTTGGCAGCGGACCC AGACTCACCCTCACGCTGGGCTCAGACCAAGGTGAACGTGGACGTGGCCG GTATGCTCGCAAGGGCCGCTAAGGCGCAGGGAGTGAAGAACTTCGTGCAC GTCAGCGCGTTGGCAGCGGACCCAGACTCACCCTCACGCTGGGCTCAGAC CAAGTTCGCGGGGAATTGGCGGTACGGGAAGCGTTCCCAGAGGCGACGAT CGTCCGACCGGCCAAGCTGTTCGGGAACAATGACCGCTTTCTCACTTGGA TTGCGGAGATTTCCAATACTACGGGCCGCGTGCCACTGTTCGCGGGGAAT TGGCGGTACGGGAAGCGTTCCCAGAGGCGACGATCGTCCGACCGGCCAAG CTGTTCGGGAACAATGACCGCTTTCTCACTTGGATTGCGGAGATTTCCAA TACTACGGGCCGCGTGCCACTGGTCAACGACGGGGACAACCTTATCCAGC CCATCGACGCGCGCGACGTGGCGAAAGTGAGTCAACGACGGGGACAACCT TATCCAGCCCATCGACGCGCGCGACGTGGCGAAAGTGA back to top
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