prot_P-lacustris_contig977.16086.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig977.16086.1
Unique Nameprot_P-lacustris_contig977.16086.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length95
Homology
BLAST of mRNA_P-lacustris_contig977.16086.1 vs. uniprot
Match: D7FNK9_ECTSI (YCII-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK9_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 3.350e-43
Identity = 71/94 (75.53%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MENYPAHKAYQQAASNPEDPRFINKVAAGPLVNETNDYMIGSCFLVEATREEAQKFADNDPFKKARATCEGVWGSISIERYVSVFGVNAHSGNL 94
            M NYPAHK YQ A +NPEDPRFINKV+AGPLV+E +DYMIGS FLV ATREEAQKF DNDPFKK     EGVW +IS+ERYVSV GV  HSGNL
Sbjct:   33 MGNYPAHKEYQAATANPEDPRFINKVSAGPLVDEVDDYMIGSFFLVAATREEAQKFVDNDPFKK-----EGVWSTISLERYVSVVGVKPHSGNL 121          
BLAST of mRNA_P-lacustris_contig977.16086.1 vs. uniprot
Match: A0A7S2V359_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V359_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 8.160e-24
Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    1 MENYPAHKAYQQAASNPEDPRFINKVAAGPLVNETNDYMIGSCFLVEATREEAQKFADNDPFKKARATCEGVWGSISIERYVSV-FGVNAHSG 92
            M  Y  HK YQ A +NPE+P +I K+AAGPL+ +   +MIGS F+VE+T+EEA  F +NDPF KA     GVW S++I RYVS+  G+ AH+G
Sbjct:   78 MAVYAEHKVYQGATANPENPEYIRKLAAGPLLTDEGTHMIGSTFIVESTKEEAIAFNENDPFAKA-----GVWKSVNISRYVSIPAGLIAHAG 165          
BLAST of mRNA_P-lacustris_contig977.16086.1 vs. uniprot
Match: A0A315ENI1_9BURK (YCII domain-containing protein n=4 Tax=Limnohabitans TaxID=665874 RepID=A0A315ENI1_9BURK)

HSP 1 Score: 52.0 bits (123), Expect = 1.200e-6
Identity = 29/77 (37.66%), Postives = 41/77 (53.25%), Query Frame = 0
Query:    6 AHKAYQQAASNPEDPRFINKVAAGPLVNETNDYMIGSCFLVEAT-REEAQKFADNDPFKKARATCEGVWGSISIERY 81
            AHKAY  AA           + +GPL+ + N+ + GSCFL+EA  + +   F +NDPF KA     GVW  + I  +
Sbjct:   23 AHKAYLSAAP-------FKILVSGPLLEDDNETINGSCFLIEAVDKAQLVNFNENDPFTKA-----GVWQQVEIRHF 87          
BLAST of mRNA_P-lacustris_contig977.16086.1 vs. uniprot
Match: A0A2E6U228_9HYPH (YCII domain-containing protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E6U228_9HYPH)

HSP 1 Score: 51.2 bits (121), Expect = 2.570e-6
Identity = 25/60 (41.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   28 AGPLVNETNDYMIGSCFLVE-ATREEAQKFADNDPFKKARATCEGVWGSISIERYVSVFG 86
            AGP +++  D MIG+  +++ ATR+EAQ FADNDP+ KA     G++ ++ I R+  + G
Sbjct:   36 AGPFISDDGDTMIGTLLVLDVATRQEAQAFADNDPYNKA-----GLFEAVEIRRWNHLIG 90          
BLAST of mRNA_P-lacustris_contig977.16086.1 vs. uniprot
Match: A0A3D9HIJ7_9PROT (YCII domain-containing protein n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HIJ7_9PROT)

HSP 1 Score: 50.8 bits (120), Expect = 3.390e-6
Identity = 25/60 (41.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   26 VAAGPLVNETNDYMIGSCFLVE-ATREEAQKFADNDPFKKARATCEGVWGSISIERYVSV 84
            +AAGPL+++ N+ M+GS  +++ A +E AQ F DNDP+ KA     G++ S+SI+ +  V
Sbjct:   36 IAAGPLLDDANETMVGSVLVMDFADKEAAQDFCDNDPYAKA-----GLFKSVSIKNWKKV 90          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig977.16086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FNK9_ECTSI3.350e-4375.53YCII-related n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A7S2V359_9STRA8.160e-2452.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A315ENI1_9BURK1.200e-637.66YCII domain-containing protein n=4 Tax=Limnohabita... [more]
A0A2E6U228_9HYPH2.570e-641.67YCII domain-containing protein n=1 Tax=Rhodobiacea... [more]
A0A3D9HIJ7_9PROT3.390e-641.67YCII domain-containing protein n=1 Tax=Aestuariisp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.1060coord: 1..88
e-value: 3.4E-9
score: 38.6
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 2..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig977contigP-lacustris_contig977:62866..64240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig977.16086.1mRNA_P-lacustris_contig977.16086.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig977 60959..64324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig977.16086.1 ID=prot_P-lacustris_contig977.16086.1|Name=mRNA_P-lacustris_contig977.16086.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=95bp
MENYPAHKAYQQAASNPEDPRFINKVAAGPLVNETNDYMIGSCFLVEATR
EEAQKFADNDPFKKARATCEGVWGSISIERYVSVFGVNAHSGNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel