mRNA_P-lacustris_contig977.16082.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: D7FNM0_ECTSI (Tetrahydrofolate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM0_ECTSI) HSP 1 Score: 145 bits (367), Expect = 1.280e-38 Identity = 76/90 (84.44%), Postives = 84/90 (93.33%), Query Frame = 1
Query: 7 VDGAGGDAPGLRTFEEAKSTLYGTISS-GAALASASRRRKSTVTNVAAYLDRIQLDITGLSVIHVAGTKGKGSTCAMVESVLRHHGFRTG 273
V GAGGDA GLRTFE+AKSTLYGTIS+ GAAL AS+RR+STVT+VAAYLDRIQLD++GLSVIHV GTKGKGSTCAMVES+LRHHGFRTG
Sbjct: 4 VHGAGGDATGLRTFEDAKSTLYGTISAAGAALEKASKRRESTVTSVAAYLDRIQLDLSGLSVIHVTGTKGKGSTCAMVESILRHHGFRTG 93
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: A0A835ZAG6_9STRA (Tetrahydrofolate synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAG6_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.940e-14 Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 43 TFEEAKSTLYGTISSGAALASASRRRKSTVTNVAAYLD--RIQLDITGLSVIHVAGTKGKGSTCAMVESVLRHHGFRTG 273
TF A + IS+GAAL +A+ +RK TV + YL R+ LDI+GL V+HV GTKGKGSTC VES+L+H+G TG
Sbjct: 10 TFTAAVDIVNNAISTGAALEAAAAQRKQTVEAMHHYLGPTRLNLDISGLKVVHVTGTKGKGSTCCFVESILQHYGVATG 88
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: A0A7R9YD74_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD74_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.980e-14 Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 46 FEEAKSTLYGTISSGAALASASRRRKSTVTNVAAYLDRIQLDITGLSVIHVAGTKGKGSTCAMVESVLR-HHGFRTGTASHARFV 297
FE S LYG S GAAL ++S RK+TV + Y +R D GL ++H+AGTKGKGS CA++E++LR H G +TG S V
Sbjct: 26 FESTISHLYGLQSRGAALQASSANRKATVEVMRQYAERAGTDFGGLKILHIAGTKGKGSCCALLEALLRAHFGLKTGFFSSPHLV 110
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: A0A5B7EBU6_PORTR (Tetrahydrofolate synthase n=3 Tax=Portunidae TaxID=6757 RepID=A0A5B7EBU6_PORTR) HSP 1 Score: 73.2 bits (178), Expect = 5.530e-13 Identity = 44/90 (48.89%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 46 FEEAKSTLYGTISSGAALASASRRRKSTVTNVAA---YLDRIQL---DITGLSVIHVAGTKGKGSTCAMVESVLRHHGFRTGTASHARFV 297
+EEA TL ++ S AA+ R+ + NV A +LDR+ + D+ LSVIH+AGTKGKGSTC+ VES+LR HGFRTG S V
Sbjct: 48 YEEAVQTLN-SLQSNAAVLQRIRQERGFTNNVQATEGFLDRVGISLKDLDSLSVIHIAGTKGKGSTCSFVESILREHGFRTGFYSSPHLV 136
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: UPI000D73548E (folylpolyglutamate synthase, mitochondrial-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D73548E) HSP 1 Score: 71.6 bits (174), Expect = 1.900e-12 Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 118 RKSTVTNVAAYLDRIQL---DITGLSVIHVAGTKGKGSTCAMVESVLRHHGFRTGTASHARFV 297
+K+ V+ V +L R+ L DI LSVIHVAGTKGKGSTCA ES+LRHHGF+TG S V
Sbjct: 31 KKAKVSRVVNFLQRVGLSVDDIDNLSVIHVAGTKGKGSTCAYAESILRHHGFKTGFYSSPHLV 93
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: A0A2T7NKT5_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NKT5_POMCA) HSP 1 Score: 71.6 bits (174), Expect = 1.980e-12 Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 118 RKSTVTNVAAYLDRIQL---DITGLSVIHVAGTKGKGSTCAMVESVLRHHGFRTGTASHARFV 297
+K+ V+ V +L R+ L DI LSVIHVAGTKGKGSTCA ES+LRHHGF+TG S V
Sbjct: 18 KKAKVSRVVNFLQRVGLSVDDIDNLSVIHVAGTKGKGSTCAYAESILRHHGFKTGFYSSPHLV 80
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: A0A6G0XFF3_9STRA (Tetrahydrofolate synthase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFF3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.570e-12 Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 40 RTFEEAKSTLYGTISSGAALASASRRRKSTVTNVAAYLDRIQLDITGLSVIHVAGTKGKGSTCAMVESVLRHHGFRTG 273
R + A L G A + S R+ + + +YL R+++DI+GLS+IHVAGTKGKGSTCA ES+LR HG +TG
Sbjct: 22 RGIDGAMDILLGMPGRPAYVGKTSDSREVAIEMMVSYLKRLRMDISGLSIIHVAGTKGKGSTCAFTESILRAHGAKTG 99
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: A0A813C1F6_9DINO (Tetrahydrofolate synthase n=3 Tax=Sar TaxID=2698737 RepID=A0A813C1F6_9DINO) HSP 1 Score: 70.9 bits (172), Expect = 3.610e-12 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 40 RTFEEAKSTLYGTISSGAALASASRRRKSTVTNVAAYLDRIQL--DITGLSVIHVAGTKGKGSTCAMVESVLRHHGFRTGTA 279
R++ A+ L+ +ISSGAAL +A++RR V + Y+ R+ L D+ L V+H+AGTKGKGST MVE++LR G RTG A
Sbjct: 8 RSYSAAERALWSSISSGAALDAAAKRRGRVVELMLVYIRRMGLVDDLLRLPVVHIAGTKGKGSTACMVEAMLRSAGLRTGEA 89
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: A0A7S4NQ94_GUITH (Tetrahydrofolate synthase (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NQ94_GUITH) HSP 1 Score: 69.7 bits (169), Expect = 3.980e-12 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 112 RRRKSTVTNVAAYLDRIQLDITGLSVIHVAGTKGKGSTCAMVESVLRHHGFRTG 273
R R V +L+++QLDI+ LSVIHVAGTKGKGSTC+MVES+LR G+RTG
Sbjct: 101 RLRTDAVEATREHLEQLQLDISRLSVIHVAGTKGKGSTCSMVESILRSKGYRTG 154
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Match: A0A815YXK3_ADIRI (Tetrahydrofolate synthase n=2 Tax=Protostomia TaxID=33317 RepID=A0A815YXK3_ADIRI) HSP 1 Score: 70.5 bits (171), Expect = 5.110e-12 Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 37 LRTFEEAKSTLYGTISSGAALASASRRRKSTVTNVAAYLD--RIQLD-ITGLSVIHVAGTKGKGSTCAMVESVLRHHGFRTGTASHARFV 297
L +EEA STL ++ + ++ +A++R ++T+V YL IQLD I L+VIHVAGTKGKGSTCA ES+LR +G+RTG S +
Sbjct: 163 LSQYEEAISTLN-SLQTNQSVVAANKRAGKSMTDVLRYLSCLNIQLDQIDRLNVIHVAGTKGKGSTCAFTESILRQYGYRTGFYSSPHLI 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig977.16082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig977.16082.1 >prot_P-lacustris_contig977.16082.1 ID=prot_P-lacustris_contig977.16082.1|Name=mRNA_P-lacustris_contig977.16082.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=100bp MEVDGAGGDAPGLRTFEEAKSTLYGTISSGAALASASRRRKSTVTNVAAYback to top mRNA from alignment at P-lacustris_contig977:27155..28092- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig977.16082.1 ID=mRNA_P-lacustris_contig977.16082.1|Name=mRNA_P-lacustris_contig977.16082.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=938bp|location=Sequence derived from alignment at P-lacustris_contig977:27155..28092- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig977:27155..28092- >mRNA_P-lacustris_contig977.16082.1 ID=mRNA_P-lacustris_contig977.16082.1|Name=mRNA_P-lacustris_contig977.16082.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=600bp|location=Sequence derived from alignment at P-lacustris_contig977:27155..28092- (Pleurocladia lacustris SAG_25_93)back to top |