prot_P-lacustris_contig966.15993.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig966.15993.1
Unique Nameprot_P-lacustris_contig966.15993.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length83
Homology
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BLAST of mRNA_P-lacustris_contig966.15993.1 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 2.400e-24
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0 
Query:   20 AYFFKDRLGLGNNERLVAMMGTWTEGLVGVSLIAIGLLGLKESLLDNQEAEIAFEDKSAGIAVV 83
            A+FFKDRLGLG+N+RLVAMMG+WTEGLVGVSLIAIGLLGLKESLLD +E   AFE KSAG AVV
Sbjct:   61 AFFFKDRLGLGHNKRLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETP-AFEAKSAGSAVV 123
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BLAST of mRNA_P-lacustris_contig966.15993.1 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.200e-8
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 0 
Query:   20 AYFFKDRL--GLGNNERLVAMMGTWTEGLVGVSLIAIGLLGLKESLLDNQEAEIA 72
            A+F KDR+  G G   R ++ +GT+TE LVGVSLI IGL+GLKESLLD    + A
Sbjct:   56 AFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDA 110
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig966.15993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJP2_ECTSI2.400e-2482.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVB1_9STRA4.200e-856.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig966contigP-lacustris_contig966:64684..65303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig966.15993.1mRNA_P-lacustris_contig966.15993.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig966 64684..65305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig966.15993.1 ID=prot_P-lacustris_contig966.15993.1|Name=mRNA_P-lacustris_contig966.15993.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=83bp
VVLGRPGQSERRRMITQTQAYFFKDRLGLGNNERLVAMMGTWTEGLVGVS
LIAIGLLGLKESLLDNQEAEIAFEDKSAGIAVV
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