prot_P-lacustris_contig9.15460.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig9.15460.1
Unique Nameprot_P-lacustris_contig9.15460.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length715
Homology
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BLAST of mRNA_P-lacustris_contig9.15460.1 vs. uniprot
Match: A0A6H5JJD6_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJD6_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 5.490e-116
Identity = 385/802 (48.00%), Postives = 447/802 (55.74%), Query Frame = 0 
Query:    7 EAAFQAAREGDVDGVRACLEGGIEADMVNPRTGRTLLHVACRQGYPEVASLLLSNGANPGAVTLRHLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNARVSDRRDNVTPXXXXXXXXXXXXXXXXXXXXXDSSAKDSNGAFPDGVIGDGSPSTVDPACARQLSEVVAGHRSRIKGAPSSLECVVDSLRSKVSELEDQLERSRRNRLEVMAYASDENRSTFSAALRPECPVCQVEVKEAVLDPCRHLAACASCADSLQSCSFCSCPVRGYQLLESRQVYERKLAWEDEVAGLRAQSERFSRRVRDLVAGNGRLKLDVRRARAEVLVLIAERQGLEQRFLLRTPSPPSTSHEVDTASIITDNSVGGFEGGEGNKPHSKFILTREESTGAKISGDGGVSGKEWQRKLGVVRSGGGSSAGASLDESNVVVHDCSVPDDAGDISVLRSPFVCAMGNGRIGRV-ESNRSQFSTEGANTRLKLGDVGASSNDDLSNTER--------------DGENDARSCISPNRFTG----------------------------------------------STAAFNTGHATDGAV---------------DVDIRLDLDLARLA----------------QSERAFSSRSLRPSRTYSGSDENLGVASVGSSGVSAETMRPVGFPGPSSVAGEGVDIVTNSRNSRTDMSNAG-EVNRADVDSTSDDGDRNDRTIICEIRSEMWPSASFIDARA 715
            +A   A ++GDVD VR  LE G++A++ NP TGRTLLH+ACRQGYP +ASLLLSNGANPGA TLR LTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +ARV+                             DSSAKD NG+FPD VIG G+P  VDPACA +LSEVV GHR RIK                                               +A++PECPVCQVEVKEAVLDPCRHLA CASCA+SLQSC  CSCPVRGY+LLESRQVYER  A EDE AG+RAQS RFSRRVRDLVA N  LKLDV+R RAE+ V+ AER+GLE+RFLLRTPSP  T   V++ SI   +SV  FEGG   KP  +F LT E STG   + D G+      ++ GVV SGGG SA  SLDE  + V D   P D    S L        G G+ G   +S+ S+   EGAN+         SS+ D S T                DG+ DA  C  P+R  G                                              S  A  T  A  G+                  D  LD                        S+R   S+S+RP+R  S S + +G A +  SG +AET  P   PG   +AG   +  TNS  S  D+SN+G +V   D +S SDDGD +  T IC   S +WPS+SFI A++
Sbjct:    8 DAVRHAVKDGDVDAVREYLESGVDANLANPNTGRTLLHIACRQGYPAMASLLLSNGANPGATTLRQLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDARVAK---------------------VLLEYGADSSAKDCNGSFPDHVIGAGAPDYVDPACAHELSEVVVGHRRRIK-----------------------------------------------SAVKPECPVCQVEVKEAVLDPCRHLATCASCANSLQSCPLCSCPVRGYRLLESRQVYERISALEDESAGMRAQSLRFSRRVRDLVAENADLKLDVQRTRAELSVVTAERRGLEERFLLRTPSPEPTPPVVESGSIAAGSSVASFEGGGAEKPRGRFTLTSENSTGTSGACDDGI---HRMQRPGVVFSGGGFSA-PSLDEPELAVLDRPRPSDG---SYLSGRPASGEGKGQAGSSSKSSCSELIAEGANS---------SSDGDPSKTTTTVETGVRVDASEGGDGQ-DAGRCFFPDRTVGDGDAAPTPVKATCGMDDQKCERQEELHACTLGTLAELKDGAGGGSESATALATVQAARGSAADDPPGLEDACLDEPTADSHLDXXXXXXXXXXXXXXXXXXXXXXEDSDRVAFSQSVRPTRACSVSVKIVGGACMDCSGSTAETTHPANLPGALFLAGRDGEEDTNSTRSPMDVSNSGNQVVERDTNSASDDGDWSISTSICGDTSGLWPSSSFILAQS 724
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig9.15460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJD6_9PHAE5.490e-11648.00RING-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 250..270
NoneNo IPR availableCOILSCoilCoilcoord: 382..402
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 292..333
e-value: 1.4E-7
score: 31.3
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 98..172
coord: 23..108
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 146..208
coord: 74..142
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 98..172
coord: 146..208
coord: 23..108
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 74..142
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 187..201
score: 38.63
coord: 105..120
score: 33.98
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 137..166
e-value: 0.044
score: 22.9
coord: 71..100
e-value: 0.031
score: 23.4
coord: 4..33
e-value: 2700.0
score: 1.8
coord: 104..133
e-value: 0.0083
score: 25.3
coord: 171..200
e-value: 7.1E-6
score: 35.5
coord: 38..67
e-value: 1.1E-4
score: 31.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 137..169
score: 11.087
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 71..103
score: 11.568
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 171..203
score: 13.971
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 104..136
score: 14.212
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 38..70
score: 11.541
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 265..337
e-value: 2.0E-9
score: 38.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 140..214
e-value: 2.6E-20
score: 74.3
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..139
e-value: 4.9E-39
score: 135.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 9..208
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 71..134
e-value: 1.5E-11
score: 44.7
coord: 135..202
e-value: 1.2E-10
score: 41.8
coord: 8..66
e-value: 2.9E-7
score: 31.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 12..208
score: 58.705
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 294..329
score: 9.214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig9contigP-lacustris_contig9:220173..224779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig9.15460.1mRNA_P-lacustris_contig9.15460.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig9 220173..224779 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig9.15460.1 ID=prot_P-lacustris_contig9.15460.1|Name=mRNA_P-lacustris_contig9.15460.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=715bp
MEAVKCEAAFQAAREGDVDGVRACLEGGIEADMVNPRTGRTLLHVACRQG
YPEVASLLLSNGANPGAVTLRHLTPLHLACHQGHLKVARLLLEAWAPVDD
RDIAGTAPLHLSAQMGHIDVVRLLLQCGAERDAQDESGWTPIFFASWKGH
AAVVHMLLQAGSNARVSDRRDNVTPLHLACCWGHLEVAKVLLEFGADSSA
KDSNGAFPDGVIGDGSPSTVDPACARQLSEVVAGHRSRIKGAPSSLECVV
DSLRSKVSELEDQLERSRRNRLEVMAYASDENRSTFSAALRPECPVCQVE
VKEAVLDPCRHLAACASCADSLQSCSFCSCPVRGYQLLESRQVYERKLAW
EDEVAGLRAQSERFSRRVRDLVAGNGRLKLDVRRARAEVLVLIAERQGLE
QRFLLRTPSPPSTSHEVDTASIITDNSVGGFEGGEGNKPHSKFILTREES
TGAKISGDGGVSGKEWQRKLGVVRSGGGSSAGASLDESNVVVHDCSVPDD
AGDISVLRSPFVCAMGNGRIGRVESNRSQFSTEGANTRLKLGDVGASSND
DLSNTERDGENDARSCISPNRFTGSTAAFNTGHATDGAVDVDIRLDLDLA
RLAQSERAFSSRSLRPSRTYSGSDENLGVASVGSSGVSAETMRPVGFPGP
SSVAGEGVDIVTNSRNSRTDMSNAGEVNRADVDSTSDDGDRNDRTIICEI
RSEMWPSASFIDARA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR013083Znf_RING/FYVE/PHD
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR001841Znf_RING