prot_P-lacustris_contig879.15258.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig879.15258.1
Unique Nameprot_P-lacustris_contig879.15258.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length639
Homology
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BLAST of mRNA_P-lacustris_contig879.15258.1 vs. uniprot
Match: D8LBB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB1_ECTSI)

HSP 1 Score: 537 bits (1383), Expect = 1.760e-182
Identity = 337/545 (61.83%), Postives = 387/545 (71.01%), Query Frame = 0 
Query:   34 SRNQAGSDASSDWGDWADAMVAQGEHLVERVAEGGDGVEGXXXXXXXXXXXXXX--EWVRSMMEQGTVGSVIEGMDSPAWDYVLQMVVDESEQRGSAATMESPTQEIEGVAATEFVSRWLRRNLPIALPALNTLALVVGGCAQQQQHQVRSSSGDGRGRQHVLAGRAVVDSVAEPSAVAVVSSSPQQRMRRVTLFSLSANSGAALAATVVQPGAVGLLAPTMGVSC--QEELDAGSLKNDT---SREFLANRVATAGDSGRGVVFESLDSRILEDALVSAMGRLGLGVKCRSRSGLWKLRPAAVLLAADASTSKAKVRPLAVEDASFIARCCANSQLGAPTTGPGRPDGAEALIHGLIRRNPSAGIRRGNQLVAWCLSFDNGLAGALHVESSTAETIFPPRPFPSFSFDPSGEKEEKGHCSPQCLVLALLASMLAQPPDTEYTVHSTLISPTACGDEEADRPASDTAIGPAEQQSGLSGSWVKSD--SVGSASVGLAAVVVDDDSPFVGLFQELDLLERVCDADWVRFEPVDR-RSNSSGTPAVV 568
            SR++A S+ASSDW DWADAMVAQGE   E           XXXXXXXX        EWVRS+MEQGTVGSVIEGM+SPAWDYVLQMVV+E E RG AAT+ESP QEI GVAATEFVSRWLR NLPI LPALN L L+ GGCAQQ Q ++ S SGDG+ ++ V  GRA+ DSVAEPS+VAVVS SP+Q M RV LFSLSANSGAALAA VVQPGAVGLL P +G +   +E +  G   NDT   S E    R    G S RGVVFESLDSRILEDALVS M RLGLG+K RSRSG+WKLRP AVL A D S + A+VRP+ +ED   IARCC        ++G G    +EAL+ GLI RNPSAGIRRG+QLVAWCLSFDNGLAGAL++   T E+  P    P  +   SG +EE G  SP+ +VLALL S+LA+PP T+   ++T   PTA  D+EA R  SD A    E+Q GLSGS +     + G  SVGL AVVVDDDSPFVGLF EL+LLERVCDADWVRFEP+    S +SG PAVV
Sbjct:   15 SRSRADSNASSDWDDWADAMVAQGEPPGESAXXXXXXXXXXXXXXXXXMAVDEQDEEWVRSLMEQGTVGSVIEGMESPAWDYVLQMVVEERE-RGGAATVESPVQEITGVAATEFVSRWLRSNLPITLPALNALKLIEGGCAQQHQ-RIGSRSGDGQEQRRVRGGRALADSVAEPSSVAVVSCSPEQGMHRVNLFSLSANSGAALAAAVVQPGAVGLLVPPVGAAALGEETVARGYNSNDTRGSSGEVSGRRSTGPGCSDRGVVFESLDSRILEDALVSTMRRLGLGLKKRSRSGMWKLRPGAVLPAGDTSITSAEVRPVTLEDVGLIARCC--------SSGLGEVGRSEALVRGLIGRNPSAGIRRGSQLVAWCLSFDNGLAGALYIAPQTTESGLPLPILPPLA---SGGQEE-GQFSPRNMVLALLGSLLARPPGTDRAANNT---PTARTDDEATRSVSDAASSTEEKQVGLSGSSLAHGRGAGGGVSVGLEAVVVDDDSPFVGLFGELELLERVCDADWVRFEPLTSCSSGASGAPAVV 542
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig879.15258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBB1_ECTSI1.760e-18261.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.630.30coord: 329..419
e-value: 9.4E-6
score: 27.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 619..636
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 578..598
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 599..618
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 637..638
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..577
NoneNo IPR availableTMHMMTMhelixcoord: 618..635
NoneNo IPR availableTMHMMTMhelixcoord: 576..598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig879contigP-lacustris_contig879:16326..24444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig879.15258.1mRNA_P-lacustris_contig879.15258.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig879 16326..24576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig879.15258.1 ID=prot_P-lacustris_contig879.15258.1|Name=mRNA_P-lacustris_contig879.15258.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=639bp
MPPDVGDKKRMRMSPPPIPNIDEMDVTTPMDGHSRNQAGSDASSDWGDWA
DAMVAQGEHLVERVAEGGDGVEGGGGSAAAAKHDEEEEWVRSMMEQGTVG
SVIEGMDSPAWDYVLQMVVDESEQRGSAATMESPTQEIEGVAATEFVSRW
LRRNLPIALPALNTLALVVGGCAQQQQHQVRSSSGDGRGRQHVLAGRAVV
DSVAEPSAVAVVSSSPQQRMRRVTLFSLSANSGAALAATVVQPGAVGLLA
PTMGVSCQEELDAGSLKNDTSREFLANRVATAGDSGRGVVFESLDSRILE
DALVSAMGRLGLGVKCRSRSGLWKLRPAAVLLAADASTSKAKVRPLAVED
ASFIARCCANSQLGAPTTGPGRPDGAEALIHGLIRRNPSAGIRRGNQLVA
WCLSFDNGLAGALHVESSTAETIFPPRPFPSFSFDPSGEKEEKGHCSPQC
LVLALLASMLAQPPDTEYTVHSTLISPTACGDEEADRPASDTAIGPAEQQ
SGLSGSWVKSDSVGSASVGLAAVVVDDDSPFVGLFQELDLLERVCDADWV
RFEPVDRRSNSSGTPAVVVNGGEGRGEWTSPVTLVSLGVAAITYSLLLCD
TRVERRAKTGTNMFKRTAVNARVVTAAVAAAGGVLSPR*
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