prot_P-lacustris_contig100.116.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig100.116.1
Unique Nameprot_P-lacustris_contig100.116.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length316
Homology
[Close]
BLAST of mRNA_P-lacustris_contig100.116.1 vs. uniprot
Match: D8LEF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF4_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 5.430e-48
Identity = 133/243 (54.73%), Postives = 156/243 (64.20%), Query Frame = 0 
Query:    1 MEGDRNLVPAGDGIGCGASR--PSNDSFKDDIQAIGRAVERLREGFAST-ISSPKPAPGHDSAQWDAELSSSMLGSGFGGRGDESDLLPSGEGTKGQQM--SSSRPLVRELVSASGGVSESFVEEDMTVESSALDRTRNSNGRLSLRELRSADEARRFYSDERARARGESDADQNSAASATTPPAASAAGVETAEAGTRVSSEKG-------------SSRTRSRVNGVGRPSSPVESRVERA 225
            ME DR  VP+ D  G GA R  P NDSFKDDIQAIGRAVERLR+GFA T  SSP PAPGHDSAQWD  LSSSML SG    GDES    SG+G  GQ    ++SRPLVREL+ A  GVS  F E D +V    L+RTR S+GRLSLRELRSAD++R  YSDERAR R +   DQ++ A A    AA+  G E A  GT+VS ++G              S +R R N VG PSSP  ++ E++
Sbjct:    1 MEEDRPWVPSSDNAGSGAGRASPLNDSFKDDIQAIGRAVERLRDGFAGTDSSSPAPAPGHDSAQWDGGLSSSMLASG---PGDESGRPSSGDGVGGQPTLGNNSRPLVRELLPARAGVSGIFAEGDTSV----LERTRYSDGRLSLRELRSADKSRTHYSDERARPRPDDAGDQSTTAVA----AAAEGGGEMAGTGTQVSDQEGLFNKGGSSGSTHSGSTSRRRANDVGGPSSPGGAQREQS 232
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEF4_ECTSI5.430e-4854.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:235697..237912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.116.1mRNA_P-lacustris_contig100.116.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig100 235665..248987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig100.116.1 ID=prot_P-lacustris_contig100.116.1|Name=mRNA_P-lacustris_contig100.116.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=316bp
MEGDRNLVPAGDGIGCGASRPSNDSFKDDIQAIGRAVERLREGFASTISS
PKPAPGHDSAQWDAELSSSMLGSGFGGRGDESDLLPSGEGTKGQQMSSSR
PLVRELVSASGGVSESFVEEDMTVESSALDRTRNSNGRLSLRELRSADEA
RRFYSDERARARGESDADQNSAASATTPPAASAAGVETAEAGTRVSSEKG
SSRTRSRVNGVGRPSSPVESRVERAAAAAALASEEGQEKRPDEQGQGGRG
GRQEHICVVCRAIRNRPFRQGTAPPLPQSRRCSRYRTWGRRDRPRWVVEE
RGGGKLGDESARWKR*
back to top