prot_P-lacustris_contig100.104.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig100.104.1
Unique Nameprot_P-lacustris_contig100.104.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length573
Homology
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE)

HSP 1 Score: 525 bits (1351), Expect = 8.650e-171
Identity = 360/695 (51.80%), Postives = 401/695 (57.70%), Query Frame = 0
Query:    1 MGGGVGKRKGAAGKKKRKSSKVCKPVVLDEVDLSVSPGSDSKASGPAGSSHNPAPSPSTGGKIKAGWYRRLLGEALLKVELDRVERSKGLEVANALSAPWRKEFVKNAKTIYALTPSGHWMAAKLERAIAEGSRHGASAN---------------------------------------------------------STATASPILNRSS--------------------------------------------------------------------------------------------------YASFSETDGGXXXXTAASPHNGHSPLAPTRAGGGAKPGVRLLIDNREKRGATKNSQISHMTSFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQGFKIVRHRNFCDFSVYLADATQALQKVFDAKSLDFESFVTWQNFIRFSKGQIPLTPKGAAXXXXXXXXXXXXXXXXXXKRGRPPISXXXXXXXXXXXXXXAAASEVGAGLRQRTLDGVFGIAGRSRGAEDGGGDSGGGSFSKPTVSWRENAI-------------AVDADGVLPPDSGAGCDSSSDDCSIVEVVRRGASGGPGS 527
            MGGG  KRK AAGK K KS K C P+ LDE+DLS    SD  A   AGS+H+P PSP  GGKIKAGWYRRLLGEALLKVEL RVE+ KG +VAN L+A WRKEFVKNAKTIY+LTP+G WMA +LERAI EG   GAS+                                                          S  T S +L R                                                                                                    YAS SE DG XXXXTAAS  NGHSPLAPTRA G AKPGVRLLIDNREKRG T NSQISH+T++LNSRGVPYEVREWK+GDYGW+VQPDAGKPP+AGEVGYEREFVVPRLLERKRVDDLAES+KDGRL RQK AMLRAK+EGV +EVE+H+EGDT D R+ DEIYRRGLTP+DLD+AL Q+E QGFK+VRH +F  FS YLADATQ+LQ  F+A+SLDFESF TWQN IRFSKGQ+P+TP  A XXXXXXXXXXXXXXXXXX+RGRPP S               A      GLRQRTLDG FG+A R      G G + G   +      RE +              A+D DG   PD GA  DSS D CS+VEVV R   GG GS
Sbjct:  217 MGGGXXKRKKAAGKDKGKSGKACDPMALDELDLSPLE-SDRNA---AGSAHDPPPSPPKGGKIKAGWYRRLLGEALLKVELHRVEKWKGPDVANGLTALWRKEFVKNAKTIYSLTPNGEWMATRLERAIGEGPGSGASSGNVNATTFDLAPLQWWDGAVCRVFAGPGYVSEGMNQKLAIILSFAGEGGDRGVGAKCISLETWSLLLGRGPLSDWGMHIRSSDCPKTCSNCHAVVKSRAEAHQYQESYGNFVFCTWRGGGGGRPWSDRRKPVRPSDPKKTRSDCDRSLPPYSCHRPVNITDDKDNDNDRYASCSERDGXXXXXTAASTRNGHSPLAPTRANGAAKPGVRLLIDNREKRGVTSNSQISHLTNYLNSRGVPYEVREWKIGDYGWVVQPDAGKPPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLVRQKKAMLRAKSEGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFASFSAYLADATQSLQIQFEARSLDFESFFTWQNLIRFSKGQVPVTPTSAXXXXXXXXXXXXXXXXXXXRRGRPPTSAVAGGCGRPPLASRPACG----GLRQRTLDGAFGVARRGEDIARGSGKAEGDCAAVGDARVREESAESRAPKAASTWEGAIDIDG--SPDPGAASDSS-DGCSVVEVVVRPIDGGGGS 900          
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: D7FIK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK4_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 5.360e-67
Identity = 143/212 (67.45%), Postives = 154/212 (72.64%), Query Frame = 0
Query:    1 MGGGVGKRKGAAGKKKRKSSKVCKPVVLDEVDLSVSPGSDSKASGPAGSSHNPAPSPSTGGKIKAGWYRRLLGEALLKVELDRVERSKGLEVANALSAPWRKEFVKNAKTIYALTPSGHWMAAKLERAIAEGS---RHGASANSTATASPILNRSSYASFSETDGGXXXXTAASPHNGHSPLAPTRAGGGAKPGVRLLIDNREKRGATKNSQ 209
            MGGG        GK K KSSK C P+ L E+DLS   G D KA   A S+H+P PSP  GGKIKAGWYRRLLGEALLKVEL RVE+ KG + AN L+A WRKEF KNAKTIY+LTP+G WMA +LERAI EG              TASPILNRSSYAS SE DG XXXXTAAS HNGHSPLAPTRA G AKPGVRLLIDNRE+RG T NSQ
Sbjct:  277 MGGGXXXXXXXXGKGKGKSSKACDPMALHELDLSPL-GGDYKA---APSAHDPPPSPPKGGKIKAGWYRRLLGEALLKVELHRVEKWKGPDAANGLTALWRKEFAKNAKTIYSLTPNGEWMATRLERAIGEGPGSXXXXXXXXXXXTASPILNRSSYASCSERDGXXXXXTAASTHNGHSPLAPTRANGAAKPGVRLLIDNRERRGVTSNSQ 484          
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: D7FIK5_ECTSI (ERCC4 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK5_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 2.300e-63
Identity = 162/265 (61.13%), Postives = 187/265 (70.57%), Query Frame = 0
Query:  275 IKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQGFKIVRHRNFCDFSVYLADATQALQKVFDAKSLDFESFVTWQNFIRFSKGQIPLTPKGAAXXXXXXXXXXXXXXXXXXKRGRPPISXXXXXXXXXXXXXXAAASEVGAGLRQRTLDGVFGIAGRSRGAEDGGGDSGGG---------------SFSKPTVSWRENAIAVDADGVLPPDSGAGCDSSSDDCSIVEVVRRGASGG 524
            +KDGRL RQK AMLRAK++GV +EVE+H+EGDT D R+ DEIYRRGLTP+DLD+AL Q+E QGFK+VRH +F  FS YLADATQ+LQ+ F+A+SLDFESF TWQN IRFSKGQ+PLTPK AAXXXXXXXXXXXXXXXXXX  GRPP S   XXXXXXXX    A+   G GLRQRTLDGVFG+A        GGG++ G                S +    S RE AI +D      PD G+  DSS D CS+VEVV R   GG
Sbjct:    1 MKDGRLVRQKKAMLRAKSDGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFAAFSAYLADATQSLQRQFEARSLDFESFFTWQNLIRFSKGQVPLTPKSAAXXXXXXXXXXXXXXXXXXXXGRPPTSAAAXXXXXXXX----ASRPAGDGLRQRTLDGVFGVARSGEDGASGGGEAEGNCPAVGGARGREETAESHAPKAASTREGAIDIDGS----PDPGSASDSS-DGCSVVEVVVRPIDGG 256          
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: UPI0007E7B1B1 (crossover junction endonuclease MUS81 n=1 Tax=Drosophila eugracilis TaxID=29029 RepID=UPI0007E7B1B1)

HSP 1 Score: 86.7 bits (213), Expect = 1.830e-14
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 0
Query:  194 LLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 369
            LL+D +E  G  KN ++   T S+L S GV YEVR   +GD+ W+ Q   G            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++  + ++  VE +  GD E         + GL  + L +AL  ++ Q G ++VR  N      YLA  +++L ++F +K L
Sbjct:  155 LLVDTQETSG--KNKRVLDQTGSYLESLGVRYEVRRLTVGDFLWVAQDKQGN-----------ELVLPYIIERKRMDDLASSIRDGRFHEQKHRLQQSGLKKIIYLVEDY--GDNE---------QLGLPLESLQQALANAKVQSGVQVVRTENHYRSMSYLAGMSRSLDQIFSSKRL 308          
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: B3MYD5_DROAN (ERCC4 domain-containing protein n=3 Tax=ananassae subgroup TaxID=32347 RepID=B3MYD5_DROAN)

HSP 1 Score: 86.3 bits (212), Expect = 2.520e-14
Identity = 64/180 (35.56%), Postives = 95/180 (52.78%), Query Frame = 0
Query:  192 VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 369
            + LL+D +E  G  KN ++   T S+L S G  +EVR   +GD+ WI +  AG            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++    V+  VE +  GD E         + GL    L +AL  +  Q G ++VR  N      YLA  T++LQ++F  K+L
Sbjct:  158 ILLLVDTQETSG--KNKRVLDQTRSYLESFGAKHEVRRLTIGDFLWIAKDRAGN-----------ELVLPYIIERKRMDDLASSIRDGRFHEQKHRLKQSGLRHVIYLVEDY--GDNE---------QLGLPLDSLQQALANARVQTGVQVVRTENHYRSMSYLASMTRSLQQIFARKTL 313          
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: A0A6P4J586_DROKI (crossover junction endonuclease MUS81 n=2 Tax=montium subgroup TaxID=32352 RepID=A0A6P4J586_DROKI)

HSP 1 Score: 83.2 bits (204), Expect = 2.430e-13
Identity = 62/180 (34.44%), Postives = 95/180 (52.78%), Query Frame = 0
Query:  192 VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 369
            + LL+D +E  G  KN ++   T S+L S G  +EVR   +GD+ WI +  AG            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++  + V+  VE +  GD E         + GL    L +AL  +  Q G ++VR  N      YLA  +++L ++F  K+L
Sbjct:  154 ILLLVDIQETSG--KNKRVLDQTRSYLESLGAQHEVRRLTIGDFLWIAKDPAGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLKQSGLKHVIYLVEDY--GDNE---------QLGLPLDSLQQALANARVQNGVQVVRTENHFRSMAYLASMSRSLAQIFGQKTL 309          
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: A0A1W4VFN3_DROFC (crossover junction endonuclease MUS81 n=1 Tax=Drosophila ficusphila TaxID=30025 RepID=A0A1W4VFN3_DROFC)

HSP 1 Score: 82.4 bits (202), Expect = 4.270e-13
Identity = 62/178 (34.83%), Postives = 92/178 (51.69%), Query Frame = 0
Query:  194 LLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 369
            LL+D +E  G  KN ++   T ++L S GV +EVR   +GD+ WI Q   G            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++    +V  VE +  GD E         + GL    L +AL  +  Q G ++VR  N      YLA   ++L ++F +K L
Sbjct:  154 LLVDTQETSG--KNKRVLDQTRNYLESLGVRHEVRRLTIGDFLWIAQDQKGN-----------ELVLPHIIERKRMDDLASSIRDGRFHEQKHRLQQSGLRNIVYLVEDY--GDNE---------QLGLPLDSLQQALANARVQTGIQVVRTENHYRSMSYLAGMGRSLGQIFASKRL 307          
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: Q29FN3_DROPS (ERCC4 domain-containing protein n=8 Tax=obscura group TaxID=32355 RepID=Q29FN3_DROPS)

HSP 1 Score: 82.4 bits (202), Expect = 5.120e-13
Identity = 64/180 (35.56%), Postives = 95/180 (52.78%), Query Frame = 0
Query:  192 VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 369
            V LL+D +E  G  KN ++   T S+L S GV +EVR   +GD+ WI +   G            E V+P ++ERKR+DDLA SI+DGR   QK+ + +     V+  +E +  GD E         + GL    L +AL  +  Q G ++VR  N      YLA  ++AL+++F +KSL
Sbjct:  184 VLLLVDTQETSG--KNKRVLDQTRSYLQSLGVDHEVRRLTVGDFLWIARDADGS-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLRQCGLLNVIYLIEDY--GDNE---------QLGLPLDSLLQALANTRIQSGIQVVRTENHYRSMCYLAGMSRALRQIFLSKSL 339          
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: Q9V3T1_DROME (EG:BACR7A4.16 protein n=8 Tax=melanogaster subgroup TaxID=32351 RepID=Q9V3T1_DROME)

HSP 1 Score: 80.9 bits (198), Expect = 1.370e-12
Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 0
Query:  189 KPG---VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 369
            KPG   + LL+D +E  G  KN ++   T S+L S G  +EVR   +GD+ W+ Q   G            E V+P ++ERKR+DDLA SI+DGR   QK+ +     + ++  VE +  GD E         + GL    L +AL  ++ Q G ++VR  N      YLA  ++ L ++F  K L
Sbjct:  147 KPGQFQLLLLVDTQETSG--KNKRVLDQTRSYLESLGARHEVRRLTIGDFLWVAQDQEGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLQHCGLQHIIYLVEDY--GDNE---------QLGLPLDSLQQALTNAKVQTGVRVVRTANHYRSMSYLAGMSRTLGQIFAGKKL 308          
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: UPI0018A129DB (crossover junction endonuclease MUS81 n=3 Tax=suzukii subgroup TaxID=32353 RepID=UPI0018A129DB)

HSP 1 Score: 80.1 bits (196), Expect = 2.400e-12
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 0
Query:  189 KPG---VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 369
            KPG   + LL+D +E  G  KN ++   T S+L S G  +EVR   +GD+ W+ Q   G            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++    ++  VE +  GD E         + GL    L +AL  ++ Q G ++VR  N      YLA  +++L ++F  K L
Sbjct:  144 KPGAFQLLLLVDTQETSG--KNKRVLDQTRSYLESLGARHEVRRLTIGDFLWVAQDPEGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLQQSGLRNIIYLVEDY--GDNE---------QLGLPLDSLQQALANAKVQTGVQVVRTENHFRSMSYLAAMSRSLGQIFANKRL 305          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF35_9PHAE8.650e-17151.80ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIK4_ECTSI5.360e-6767.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FIK5_ECTSI2.300e-6361.13ERCC4 domain containing protein n=1 Tax=Ectocarpus... [more]
UPI0007E7B1B11.830e-1434.83crossover junction endonuclease MUS81 n=1 Tax=Dros... [more]
B3MYD5_DROAN2.520e-1435.56ERCC4 domain-containing protein n=3 Tax=ananassae ... [more]
A0A6P4J586_DROKI2.430e-1334.44crossover junction endonuclease MUS81 n=2 Tax=mont... [more]
A0A1W4VFN3_DROFC4.270e-1334.83crossover junction endonuclease MUS81 n=1 Tax=Dros... [more]
Q29FN3_DROPS5.120e-1335.56ERCC4 domain-containing protein n=8 Tax=obscura gr... [more]
Q9V3T1_DROME1.370e-1233.87EG:BACR7A4.16 protein n=8 Tax=melanogaster subgrou... [more]
UPI0018A129DB2.400e-1233.87crossover junction endonuclease MUS81 n=3 Tax=suzu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006166ERCC4 domainSMARTSM00891ERCC4_2coord: 193..307
e-value: 5.0E-9
score: 46.0
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 196..349
e-value: 5.3E-8
score: 33.2
NoneNo IPR availableGENE3D3.40.50.10130coord: 226..389
e-value: 9.5E-17
score: 63.4
NoneNo IPR availablePANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 134..370
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 191..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:109608..114453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.104.1mRNA_P-lacustris_contig100.104.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig100 108890..118602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig100.104.1 ID=prot_P-lacustris_contig100.104.1|Name=mRNA_P-lacustris_contig100.104.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=573bp
MGGGVGKRKGAAGKKKRKSSKVCKPVVLDEVDLSVSPGSDSKASGPAGSS
HNPAPSPSTGGKIKAGWYRRLLGEALLKVELDRVERSKGLEVANALSAPW
RKEFVKNAKTIYALTPSGHWMAAKLERAIAEGSRHGASANSTATASPILN
RSSYASFSETDGGGGGGTAASPHNGHSPLAPTRAGGGAKPGVRLLIDNRE
KRGATKNSQISHMTSFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGE
VGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVE
LHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQGFKIVRHRNFCDFS
VYLADATQALQKVFDAKSLDFESFVTWQNFIRFSKGQIPLTPKGAAAAAA
AEKAAAIAKAARGGKRGRPPISAVGGGGRGRPPPSTAAASEVGAGLRQRT
LDGVFGIAGRSRGAEDGGGDSGGGSFSKPTVSWRENAIAVDADGVLPPDS
GAGCDSSSDDCSIVEVVRRGASGGPGSGSATAAPTLRDGGAGAGGRKEEG
AGRGGDLAIHHRCSWRLLPRCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006166ERCC4_domain
IPR011335Restrct_endonuc-II-like