Homology
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE)
HSP 1 Score: 560 bits (1443), Expect = 8.780e-177
Identity = 375/713 (52.59%), Postives = 417/713 (58.49%), Query Frame = 2
Query: 929 VKTATFLRSVYCDEHFKEMGGGVGKRKGAAGKKKRKSSKVCKPVVLDEVDLSVSPGSDSKASGPAGSSHNPAPSPSTGGKIKAGWYRRLLGEALLKVELDRVERSKGLEVANALSAPWRKEFVKNAKTIYALTPSGHWMAAKLERAIAEGSRHGASAN---------------------------------------------------------STATASPILNRSS--------------------------------------------------------------------------------------------------YASFSETDGGXXXXTAASPHNGHSPLAPTRAGGGAKPGVRLLIDNREKRGATKNSQISHMTSFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQGFKIVRHRNFCDFSVYLADATQALQKVFDAKSLDFESFVTWQNFIRFSKGQIPLTPKGAAXXXXXXXXXXXXXXXXXXKRGRPPISXXXXXXXXXXXXXXAAASEVGAGLRQRTLDGVFGIAGRSRGAEDGGGDSGGGSFSKPTVSWRENAI-------------AVDADGVLPPDSGAGCDSSSDDCSIVEVVRRGASGGPGS 2563
VK ATFLRSVYCDEH+ EMGGG KRK AAGK K KS K C P+ LDE+DLS SD A AGS+H+P PSP GGKIKAGWYRRLLGEALLKVEL RVE+ KG +VAN L+A WRKEFVKNAKTIY+LTP+G WMA +LERAI EG GAS+ S T S +L R YAS SE DG XXXXTAAS NGHSPLAPTRA G AKPGVRLLIDNREKRG T NSQISH+T++LNSRGVPYEVREWK+GDYGW+VQPDAGKPP+AGEVGYEREFVVPRLLERKRVDDLAES+KDGRL RQK AMLRAK+EGV +EVE+H+EGDT D R+ DEIYRRGLTP+DLD+AL Q+E QGFK+VRH +F FS YLADATQ+LQ F+A+SLDFESF TWQN IRFSKGQ+P+TP A XXXXXXXXXXXXXXXXXX+RGRPP S A GLRQRTLDG FG+A R G G + G + RE + A+D DG PD GA DSS D CS+VEVV R GG GS
Sbjct: 199 VKPATFLRSVYCDEHYTEMGGGXXKRKKAAGKDKGKSGKACDPMALDELDLSPLE-SDRNA---AGSAHDPPPSPPKGGKIKAGWYRRLLGEALLKVELHRVEKWKGPDVANGLTALWRKEFVKNAKTIYSLTPNGEWMATRLERAIGEGPGSGASSGNVNATTFDLAPLQWWDGAVCRVFAGPGYVSEGMNQKLAIILSFAGEGGDRGVGAKCISLETWSLLLGRGPLSDWGMHIRSSDCPKTCSNCHAVVKSRAEAHQYQESYGNFVFCTWRGGGGGRPWSDRRKPVRPSDPKKTRSDCDRSLPPYSCHRPVNITDDKDNDNDRYASCSERDGXXXXXTAASTRNGHSPLAPTRANGAAKPGVRLLIDNREKRGVTSNSQISHLTNYLNSRGVPYEVREWKIGDYGWVVQPDAGKPPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLVRQKKAMLRAKSEGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFASFSAYLADATQSLQIQFEARSLDFESFFTWQNLIRFSKGQVPVTPTSAXXXXXXXXXXXXXXXXXXXRRGRPPTSAVAGGCGRPPLASRPACG----GLRQRTLDGAFGVARRGEDIARGSGKAEGDCAAVGDARVREESAESRAPKAASTWEGAIDIDG--SPDPGAASDSS-DGCSVVEVVVRPIDGGGGS 900
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
D7FIK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK4_ECTSI)
HSP 1 Score: 384 bits (987), Expect = 1.360e-118
Identity = 201/260 (77.31%), Postives = 215/260 (82.69%), Query Frame = 3
Query: 159 MASNWGPDPRMLAFPITKPPPTRWEDVSRVHGRCSRHWGLIRGLIVEQKKARNNRSSSSARLTATLFREVVTRLSLSLEAVDTKDKFNSTPGVGEMIHKMGEKYLVAQVTARNPKHQPSAKMFVASPAAILVAMSREGKRRATASDVAGATDGD-GTTAXXXATVWLREKEIRALAAPLCEEDLTHRGDEIVLGEVENFAWSSMAHLISNTKFDCVMRKDLDEKSAIAQLEEHRERPVCNSLACVAFATKSMGDLSEESK 935
MAS+W DPRMLAFPITKPPPTRWEDVS VHGRCSRHWGLIRGL+ EQKKAR NR SSSARLTATLFREVV RLSLSLEAVDTKDKF+ TPGVGEMI KMG K+L AQVTARNPKHQPS K FVAS AAILVAMSRE KRRAT DV ++G G A W EKEIR LAAPLCEEDLTHRGDEIVLGEVENFAW SMA+L ++ KFDCV RKDLDEK+ IAQL+E ERP+C+S C A+ATKSMGDLSE K
Sbjct: 1 MASDWALDPRMLAFPITKPPPTRWEDVSCVHGRCSRHWGLIRGLMEEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMIQKMGAKHLAAQVTARNPKHQPSNKTFVASAAAILVAMSREVKRRATVVDVTSESNGGKGPPAAAAPAAWFTEKEIRRLAAPLCEEDLTHRGDEIVLGEVENFAWCSMAYLTNHNKFDCVARKDLDEKATIAQLQELGERPICSSPGCNAYATKSMGDLSERVK 260
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
D7FIK5_ECTSI (ERCC4 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK5_ECTSI)
HSP 1 Score: 226 bits (577), Expect = 2.900e-60
Identity = 162/265 (61.13%), Postives = 187/265 (70.57%), Query Frame = 2
Query: 1805 IKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQGFKIVRHRNFCDFSVYLADATQALQKVFDAKSLDFESFVTWQNFIRFSKGQIPLTPKGAAXXXXXXXXXXXXXXXXXXKRGRPPISXXXXXXXXXXXXXXAAASEVGAGLRQRTLDGVFGIAGRSRGAEDGGGDSGGG---------------SFSKPTVSWRENAIAVDADGVLPPDSGAGCDSSSDDCSIVEVVRRGASGG 2554
+KDGRL RQK AMLRAK++GV +EVE+H+EGDT D R+ DEIYRRGLTP+DLD+AL Q+E QGFK+VRH +F FS YLADATQ+LQ+ F+A+SLDFESF TWQN IRFSKGQ+PLTPK AAXXXXXXXXXXXXXXXXXX GRPP S XXXXXXXX A+ G GLRQRTLDGVFG+A GGG++ G S + S RE AI +D PD G+ DSS D CS+VEVV R GG
Sbjct: 1 MKDGRLVRQKKAMLRAKSDGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFAAFSAYLADATQSLQRQFEARSLDFESFFTWQNLIRFSKGQVPLTPKSAAXXXXXXXXXXXXXXXXXXXXGRPPTSAAAXXXXXXXX----ASRPAGDGLRQRTLDGVFGVARSGEDGASGGGEAEGNCPAVGGARGREETAESHAPKAASTREGAIDIDGS----PDPGSASDSS-DGCSVVEVVVRPIDGG 256
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
UPI0007E7B1B1 (crossover junction endonuclease MUS81 n=1 Tax=Drosophila eugracilis TaxID=29029 RepID=UPI0007E7B1B1)
HSP 1 Score: 86.7 bits (213), Expect = 5.470e-14
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 2
Query: 1562 LLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
LL+D +E G KN ++ T S+L S GV YEVR +GD+ W+ Q G E V+P ++ERKR+DDLA SI+DGR QK+ + ++ + ++ VE + GD E + GL + L +AL ++ Q G ++VR N YLA +++L ++F +K L
Sbjct: 155 LLVDTQETSG--KNKRVLDQTGSYLESLGVRYEVRRLTVGDFLWVAQDKQGN-----------ELVLPYIIERKRMDDLASSIRDGRFHEQKHRLQQSGLKKIIYLVEDY--GDNE---------QLGLPLESLQQALANAKVQSGVQVVRTENHYRSMSYLAGMSRSLDQIFSSKRL 308
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
B3MYD5_DROAN (ERCC4 domain-containing protein n=3 Tax=ananassae subgroup TaxID=32347 RepID=B3MYD5_DROAN)
HSP 1 Score: 86.3 bits (212), Expect = 7.570e-14
Identity = 64/180 (35.56%), Postives = 95/180 (52.78%), Query Frame = 2
Query: 1556 VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
+ LL+D +E G KN ++ T S+L S G +EVR +GD+ WI + AG E V+P ++ERKR+DDLA SI+DGR QK+ + ++ V+ VE + GD E + GL L +AL + Q G ++VR N YLA T++LQ++F K+L
Sbjct: 158 ILLLVDTQETSG--KNKRVLDQTRSYLESFGAKHEVRRLTIGDFLWIAKDRAGN-----------ELVLPYIIERKRMDDLASSIRDGRFHEQKHRLKQSGLRHVIYLVEDY--GDNE---------QLGLPLDSLQQALANARVQTGVQVVRTENHYRSMSYLASMTRSLQQIFARKTL 313
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
A0A6P4J586_DROKI (crossover junction endonuclease MUS81 n=2 Tax=montium subgroup TaxID=32352 RepID=A0A6P4J586_DROKI)
HSP 1 Score: 83.2 bits (204), Expect = 7.150e-13
Identity = 62/180 (34.44%), Postives = 95/180 (52.78%), Query Frame = 2
Query: 1556 VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
+ LL+D +E G KN ++ T S+L S G +EVR +GD+ WI + AG E V+P ++ERKR+DDLA SI+DGR QK+ + ++ + V+ VE + GD E + GL L +AL + Q G ++VR N YLA +++L ++F K+L
Sbjct: 154 ILLLVDIQETSG--KNKRVLDQTRSYLESLGAQHEVRRLTIGDFLWIAKDPAGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLKQSGLKHVIYLVEDY--GDNE---------QLGLPLDSLQQALANARVQNGVQVVRTENHFRSMAYLASMSRSLAQIFGQKTL 309
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
A0A1W4VFN3_DROFC (crossover junction endonuclease MUS81 n=1 Tax=Drosophila ficusphila TaxID=30025 RepID=A0A1W4VFN3_DROFC)
HSP 1 Score: 82.4 bits (202), Expect = 1.250e-12
Identity = 62/178 (34.83%), Postives = 92/178 (51.69%), Query Frame = 2
Query: 1562 LLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
LL+D +E G KN ++ T ++L S GV +EVR +GD+ WI Q G E V+P ++ERKR+DDLA SI+DGR QK+ + ++ +V VE + GD E + GL L +AL + Q G ++VR N YLA ++L ++F +K L
Sbjct: 154 LLVDTQETSG--KNKRVLDQTRNYLESLGVRHEVRRLTIGDFLWIAQDQKGN-----------ELVLPHIIERKRMDDLASSIRDGRFHEQKHRLQQSGLRNIVYLVEDY--GDNE---------QLGLPLDSLQQALANARVQTGIQVVRTENHYRSMSYLAGMGRSLGQIFASKRL 307
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
Q29FN3_DROPS (ERCC4 domain-containing protein n=8 Tax=obscura group TaxID=32355 RepID=Q29FN3_DROPS)
HSP 1 Score: 82.4 bits (202), Expect = 1.540e-12
Identity = 64/180 (35.56%), Postives = 95/180 (52.78%), Query Frame = 2
Query: 1556 VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
V LL+D +E G KN ++ T S+L S GV +EVR +GD+ WI + G E V+P ++ERKR+DDLA SI+DGR QK+ + + V+ +E + GD E + GL L +AL + Q G ++VR N YLA ++AL+++F +KSL
Sbjct: 184 VLLLVDTQETSG--KNKRVLDQTRSYLQSLGVDHEVRRLTVGDFLWIARDADGS-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLRQCGLLNVIYLIEDY--GDNE---------QLGLPLDSLLQALANTRIQSGIQVVRTENHYRSMCYLAGMSRALRQIFLSKSL 339
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
Q9V3T1_DROME (EG:BACR7A4.16 protein n=8 Tax=melanogaster subgroup TaxID=32351 RepID=Q9V3T1_DROME)
HSP 1 Score: 80.9 bits (198), Expect = 4.000e-12
Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 2
Query: 1547 KPG---VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
KPG + LL+D +E G KN ++ T S+L S G +EVR +GD+ W+ Q G E V+P ++ERKR+DDLA SI+DGR QK+ + + ++ VE + GD E + GL L +AL ++ Q G ++VR N YLA ++ L ++F K L
Sbjct: 147 KPGQFQLLLLVDTQETSG--KNKRVLDQTRSYLESLGARHEVRRLTIGDFLWVAQDQEGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLQHCGLQHIIYLVEDY--GDNE---------QLGLPLDSLQQALTNAKVQTGVRVVRTANHYRSMSYLAGMSRTLGQIFAGKKL 308
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match:
UPI0018A129DB (crossover junction endonuclease MUS81 n=3 Tax=suzukii subgroup TaxID=32353 RepID=UPI0018A129DB)
HSP 1 Score: 80.1 bits (196), Expect = 6.930e-12
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 2
Query: 1547 KPG---VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
KPG + LL+D +E G KN ++ T S+L S G +EVR +GD+ W+ Q G E V+P ++ERKR+DDLA SI+DGR QK+ + ++ ++ VE + GD E + GL L +AL ++ Q G ++VR N YLA +++L ++F K L
Sbjct: 144 KPGAFQLLLLVDTQETSG--KNKRVLDQTRSYLESLGARHEVRRLTIGDFLWVAQDPEGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLQQSGLRNIIYLVEDY--GDNE---------QLGLPLDSLQQALANAKVQTGVQVVRTENHFRSMSYLAAMSRSLGQIFANKRL 305
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 8.78e-177 / Id = 52.59 Expect = 1.36e-118 / Id = 77.31 Expect = 2.90e-60 / Id = 61.13 Expect = 5.47e-14 / Id = 34.83 Expect = 7.57e-14 / Id = 35.56 Expect = 7.15e-13 / Id = 34.44 Expect = 1.25e-12 / Id = 34.83 Expect = 1.54e-12 / Id = 35.56 Expect = 4.00e-12 / Id = 33.87 Expect = 6.93e-12 / Id = 33.87 Sequence A0A6H5KF35_9PHAE D7FIK4_ECTSI D7FIK5_ECTSI UPI0007E7B1B1 B3MYD5_DROAN A0A6P4J586_DROKI A0A1W4VFN3_DROFC Q29FN3_DROPS Q9V3T1_DROME UPI0018A129DB Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Arthropoda Seed ortholog score 87.8 Seed ortholog evalue 1.8e-14 Seed eggNOG ortholog 7217.FBpp0125310 Preferred name mus81 KEGG ko ko:K08991 KEGG Pathway ko03440,ko03460,map03440,map03460 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000280,GO:0000712,GO:0000724,GO:0000725,GO:0000727,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007093,GO:0007127,GO:0007131,GO:0007346,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0022402,GO:0022414,GO:0031297,GO:0031570,GO:0031573,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0044773,GO:0044774,GO:0045005,GO:0045132,GO:0045786,GO:0045930,GO:0046483,GO:0048256,GO:0048257,GO:0048285,GO:0048476,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051304,GO:0051307,GO:0051321,GO:0051716,GO:0051726,GO:0061982,GO:0065007,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901576,GO:1903046,GO:1903047 EggNOG free text desc. It is involved in the biological process described with DNA metabolic process EggNOG OGs 39FPI@33154,3BGR6@33208,3CVZN@33213,3SHUA@50557,41U8G@6656,4517T@7147,45SH7@7214,COG1948@1,KOG2379@2759 Ec32 ortholog description ERCC4 domain containing protein Ec32 ortholog Ec-27_000090.1 COG Functional cat. L Best tax level Drosophilidae Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko03400 Exons 14 Model size 3419 Cds size 1719 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815265.877974-UTR-P-lacustris_contig100:108889..109607 1622815265.877974-UTR-P-lacustris_contig100:108889..109607 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 108890..109607 - 1693493438.4399953-UTR-P-lacustris_contig100:108889..109607 1693493438.4399953-UTR-P-lacustris_contig100:108889..109607 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 108890..109607 - 1622815266.0233686-UTR-P-lacustris_contig100:114453..114484 1622815266.0233686-UTR-P-lacustris_contig100:114453..114484 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 114454..114484 - 1693493438.5545292-UTR-P-lacustris_contig100:114453..114484 1693493438.5545292-UTR-P-lacustris_contig100:114453..114484 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 114454..114484 - 1622815266.0360312-UTR-P-lacustris_contig100:114837..114940 1622815266.0360312-UTR-P-lacustris_contig100:114837..114940 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 114838..114940 - 1693493438.5683587-UTR-P-lacustris_contig100:114837..114940 1693493438.5683587-UTR-P-lacustris_contig100:114837..114940 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 114838..114940 - 1622815266.0463905-UTR-P-lacustris_contig100:115423..115536 1622815266.0463905-UTR-P-lacustris_contig100:115423..115536 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 115424..115536 - 1693493438.5775187-UTR-P-lacustris_contig100:115423..115536 1693493438.5775187-UTR-P-lacustris_contig100:115423..115536 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 115424..115536 - 1622815266.0556781-UTR-P-lacustris_contig100:115931..116104 1622815266.0556781-UTR-P-lacustris_contig100:115931..116104 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 115932..116104 - 1693493438.5855436-UTR-P-lacustris_contig100:115931..116104 1693493438.5855436-UTR-P-lacustris_contig100:115931..116104 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 115932..116104 - 1622815266.066876-UTR-P-lacustris_contig100:116629..116745 1622815266.066876-UTR-P-lacustris_contig100:116629..116745 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 116630..116745 - 1693493438.59642-UTR-P-lacustris_contig100:116629..116745 1693493438.59642-UTR-P-lacustris_contig100:116629..116745 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 116630..116745 - 1622815266.0761259-UTR-P-lacustris_contig100:117262..117415 1622815266.0761259-UTR-P-lacustris_contig100:117262..117415 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 117263..117415 - 1693493438.6055565-UTR-P-lacustris_contig100:117262..117415 1693493438.6055565-UTR-P-lacustris_contig100:117262..117415 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 117263..117415 - 1622815266.085732-UTR-P-lacustris_contig100:118309..118602 1622815266.085732-UTR-P-lacustris_contig100:118309..118602 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 118310..118602 - 1693493438.6150181-UTR-P-lacustris_contig100:118309..118602 1693493438.6150181-UTR-P-lacustris_contig100:118309..118602 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 118310..118602 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815265.890687-CDS-P-lacustris_contig100:109607..109933 1622815265.890687-CDS-P-lacustris_contig100:109607..109933 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 109608..109933 - 1693493438.4513319-CDS-P-lacustris_contig100:109607..109933 1693493438.4513319-CDS-P-lacustris_contig100:109607..109933 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 109608..109933 - 1622815265.90462-CDS-P-lacustris_contig100:110015..110391 1622815265.90462-CDS-P-lacustris_contig100:110015..110391 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 110016..110391 - 1693493438.4604163-CDS-P-lacustris_contig100:110015..110391 1693493438.4604163-CDS-P-lacustris_contig100:110015..110391 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 110016..110391 - 1622815265.9156299-CDS-P-lacustris_contig100:110670..110854 1622815265.9156299-CDS-P-lacustris_contig100:110670..110854 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 110671..110854 - 1693493438.4697464-CDS-P-lacustris_contig100:110670..110854 1693493438.4697464-CDS-P-lacustris_contig100:110670..110854 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 110671..110854 - 1622815265.9323177-CDS-P-lacustris_contig100:111618..111701 1622815265.9323177-CDS-P-lacustris_contig100:111618..111701 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 111619..111701 - 1693493438.4888968-CDS-P-lacustris_contig100:111618..111701 1693493438.4888968-CDS-P-lacustris_contig100:111618..111701 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 111619..111701 - 1622815265.9450371-CDS-P-lacustris_contig100:111956..112079 1622815265.9450371-CDS-P-lacustris_contig100:111956..112079 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 111957..112079 - 1693493438.5035903-CDS-P-lacustris_contig100:111956..112079 1693493438.5035903-CDS-P-lacustris_contig100:111956..112079 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 111957..112079 - 1622815265.9544637-CDS-P-lacustris_contig100:112730..113027 1622815265.9544637-CDS-P-lacustris_contig100:112730..113027 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 112731..113027 - 1693493438.513406-CDS-P-lacustris_contig100:112730..113027 1693493438.513406-CDS-P-lacustris_contig100:112730..113027 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 112731..113027 - 1622815265.9657524-CDS-P-lacustris_contig100:113527..113782 1622815265.9657524-CDS-P-lacustris_contig100:113527..113782 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 113528..113782 - 1693493438.5236616-CDS-P-lacustris_contig100:113527..113782 1693493438.5236616-CDS-P-lacustris_contig100:113527..113782 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 113528..113782 - 1622815265.976033-CDS-P-lacustris_contig100:114378..114453 1622815265.976033-CDS-P-lacustris_contig100:114378..114453 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 114379..114453 - 1693493438.5430324-CDS-P-lacustris_contig100:114378..114453 1693493438.5430324-CDS-P-lacustris_contig100:114378..114453 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 114379..114453 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig100.104.1
>prot_P-lacustris_contig100.104.1 ID=prot_P-lacustris_contig100.104.1|Name=mRNA_P-lacustris_contig100.104.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=573bp
MGGGVGKRKGAAGKKKRKSSKVCKPVVLDEVDLSVSPGSDSKASGPAGSS back to top mRNA from alignment at P-lacustris_contig100:108890..118602-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig100.104.1 ID=mRNA_P-lacustris_contig100.104.1|Name=mRNA_P-lacustris_contig100.104.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=9713bp|location=Sequence derived from alignment at P-lacustris_contig100:108890..118602- (Pleurocladia lacustris SAG_25_93)GCATCCCCGCCTGCCCTGACTACAGCAGTTGTGGGTGGTGCTGTCCTGTG
GGCGAGGTTGCAGGCGGTAAGGTTGGTTCTGGCGGTGCGGAACTGTTCAA
CGAGAGTGCGAAGCCTCCCACACGCGCAGACACTTGCGAACTTTACTCGC
GAGAGACGATGGCTTCGAATTGGGGGCCAGACCCTCGGATGCTGGCCTTC
CCCATCACCAAGCCGCCTCCGACGAGATGGGAAGATGTATCACGTGTGCA
CGGCAGGTGTTCCCGTCACTGGGGACTTATTCGTGGTCTCATC GTGAGTC
GACGATCGCCTTATGTTTTGGCTTACCTTCGAACTTTTGCAGTGCACTAT
TTGTATATCTAGGGTGGTCCGTTGAGAAATTTGGTGCGCGCCTGAATTTG
TAGCATACAAAACGAGCTACATGTAAACTTGAACGAGGGAGCGTAGCGCG
TGATGCGATTGCGGTTCCCCGATGTAAACGGCAGACTTGACTTCTGTAGT
ACAAAGGGAAGGACACGCGTCGCGCGTAACGGTGAAAATGTTCAACAACC
GTAGTTGGTACTTTAGTGATGGCGTAAATGGCTTTTACCGTCGGATCTTG
AGCTTCAAGTGGCGAACATCGAACACCTGTTGAAACAGAAATTGATTCAT
ATATCTCGTAGCAAAACATACACCTTCTCCTTTGAAGTGCTTTCTTTTCC
TAGACCAAATCAGCAACAAGAAAATCAGGCAGATCGCCAGTTGGCGAGGG
AAAACAGATCCAGCGGCAGCAGCGCGAGAGACCAAAAAAGGCTAAAATCA
AACCAAATCAAACCAAACCAAGTCAAACCTGCAAGCGCGCCTTTTGCCGC
GATTGTCGCGACTCCTTTGTCGCATTTATACAACATCATGCATGGTGAGA
AGGGGAGACACATGCCGAAACCCTCTCGCGCGAACAGATTGACCAACGCG
TGCAACGTGGAGTTCTTCTGTGTGACCCCGGTTCGGAGGTCTTCCGCTGG
AGAGAGGAGGCCGTAGGACAGGTAAAAGGTCCAATCCACGAGCGACGATT
ACTAGACAGGCTCGATCATCATCGACGTTAAAGAAAAACGGGCCACAGCT
ATACATCCCCAAGAGCTCACCTGCCTCATGTTTTCTCAACGTACCCAATA
CGGAAACCGCCCCGCCACGAAAAAAAAAAACGAACAGGTCGAGCAAAAAA
AGGCGAGGAATAACCGAAGCAGCAGCAGTGCACGACTGACGGCGACTCTG
TTCCGAGAGGTGGTGACCCGCCTCAGCCTCTCTCTTGAAGCGGTTGATAC
CAAGGATAAGTTCAACTCCACCCCTGGGGTCGGCGAAATG GTGCGTTTCG
AGGGTCAAGTTGTGCTATCACTGTTGCCACTGTTATTACGGTTGCTGTTG
GCGGTGGTCATCGGATCGTTTGCGGTCGATGTTGTGGTGGCAGCTGGTGC
CTCTGATTTTGTTGCATCACACCGTAATTTGCGACATTGAGCGGACAAGC
CACGTCGATGGCGCCACATACCGTCCACTTGCTCGAGGTTCTCGATCTAC
GTTGGGAAAAGGTAGGCTAGGCGGAGCACTATAAGTATGGTGAAATGGAA
GCGCCATATGGAATGTGGAAGGCCTCGTGCTGGACATTTTGTTTTTTCCT
GTAACCACGGGCTACATAGGAACTGTATGGAATATCTGCACCACATTTAT
TGTTTGGCAACAGCAACACAACGACCACAACAGTAACATAACGTCTTTTT
TGTGGCACGGAAGAGGCGAGTGTCCAATCAGATCGCTTCAGAATTAAGCG
CATGCGCATATTGCCCTGCCGCCTTATAACTTGAGCCATTCGATGCACCT
CTGGCAGATCCACAAGATGGGCGAGAAGTACTTGGTGGCACAGGTCACAG
CTCGAAACCCCAAACATCAGCCATCTGCCAAGATGTTCGTGGCGTCCCCG
GCGGCCATCCTTGTCGCAATGAG GTGCGCGCCGCGAAGATGGAGTTGTGG
TGCGGGAATCGTCGCTGTTGTTCATATCGCCATTGCTTTCGTCGCACATG
TTGTTTTTGGTACATCTCCCTTTTTTTTTCCTCCACGGTCTGACTGTTTC
GGGGCTCTGCTTCCCTGTTTTGAGCCACAACCTCCGGGTGTCCCAGCAAT
TCTTTCTTTTGTTGAGGTGTTTGTATTCATTGGGTTTGATTATGTCTCCG
CTAGCGTAGACCAGACCAGACTAGACTAGAGACCGTCGTCATATCCGTCA
CGTCTAGTGAGTGGTATGCTGACCTCTCTGTCGGTGTCTACGTGGCACAG
GAATAAATTAGACTATGTCCCATCATTGGTCGAACGGGTTTGTTGTCATC
GTCAGGGATTGTACAGGCATGTAAAGACATCCGTCACTCCGCTTTTGCGT
GGCACTGACGAGGGGCTGCGATTTTAGCTGTACTTCATCTACCTAACACT
GCGCAAATGGCAACAAAAATAACGATAACGACAACAATAACGCACCAGTC
GTGAAGGGAAACGTCGAGCGACGGCCAGCGACGTCGCCGGCGCTACTGAT
GGAGACGGGACAACGGCAACAGCCACAGCAACGGTGTGGCTCAGAGAGAA
GGAGATCAGAGCTCTGGCCGCCCCCCTCTGCGAAGAGGACCTGACTCACA
GAGGAGACGAGATCGTTTTGG GTGAGAAGAGTAGCAACAAACTAGCCTTG
GGGCAAGGAAAGAGACAAGGAGAGAGTCTGGACCGGTGGGTGGAGGGAAA
GGGGGCACGTGGATGGGGGCATATCCTTTTTTACCTTCTCACGACATGCG
TGGAAGACATCTGATCGGGGAGAGTGTAAGGAGCTAGAGTTGGCGTGGTT
GCTGCGGGCAAATAGAGGCACCAGAGCGACTGTGCGTGACCGGCAGGTTC
ACACGCGTTTAGGTCGTGTTTCCTGAAGGCTGATCGCGTGGTTGCGAAGC
GTCCTCCCCGGATAATTCGTGGGTAGGTGATTGAACGGAAGGATGGAAAA
ATATATCAACACTCATATCATTCACCTTCCCCTGATGCGTGGTTTCATGT
GAACGAACACGCGCAGGAGAGGTGGAGAACTTCGCCTGGTCGTCAATGGC
CCACCTCATCAGCAACACCAAGTTCGACTGCGTCATGAGGAAGGATCTCG
ACGAGAAATCCGCAATCGCCCAGCTAGAG GTAAGGTAATCCCGAACGGAT
GTCTGTATGGTTCTTGCTGTTGGCAGGTAGATGTAGAGTGCAGGTATGGT
CTTGTTGATGGTGATGGTGGTGGTGGTGGTGGCGGCAGCGGCGGCGGTAC
TGTTGATAGTGGGGGACGGTGGGGGCATTTCGGTGAATGTTTGCGTTACC
AGTATTGTTTGGGATGTGTCCCTGCTGGTGCTGGTGCTATTTGTCCTGAG
TCGTGTTGTGCCCTCAGTTTGTCTCACCTGCTCCTGACATTTTATCACCG
CTGTCGTCGCCGCCACTACTCCTACAGCTATTGCGACTACCGTCGGTAAC
TATTAGCTGGTATATTCGCACGGTCTAATCTAACTTGCTGCGCCTTGATT
ATCTCTCAGCAAGAGTCGAGAGAGGACGTCGTCGCTGACGACTTGACTTC
CAATGCCTTGATTAGCGTACCGACAATGCTGTTTGGCTTGGGTGCGATTT
GCATTGTTGCAGGAACATCGAGAGCGGCCGGTGTGCAACAGCCTTGCCTG
CGTGGCTTTCGCCACGAAGAGCATGGGGGACCTCAGTGAGGAGTCAAAAC
CGCCACGTTCCTAAG GTGATGCTATTAGTGTTGTTTCGAAAGTCGTGCTG
GTACACGAGACATTAGTTACCACCGCTTCTGCTTGTTGGTACTGTTGACT
TTGTGTTCTTTATTCCTGTAAGATTTTCTCTTGTCTCTTTCAGTATGATG
CGTTATGTTTGTGTCGAAAGCGTCGGCCTATGGGTTGCTACTATGGTTTA
CAGAATCGGAGCATGCGAACCCCCCAAACAAATCTACCGCCGCCAGCACG
ACTCACCATGACCATCACCCATTATTTGGCAGTTTGTCAGCCGTCATAGC
CCACGTACGTTTTTCTTTGCATGCTTTTACTGTTGACACATGTTTTGGGC
CGCTCGTATCCGCGGCAGGAGCGTTTACTGCGACGAGCACTTCAAGGAG A
TGGGAGGCGGCGTGGGTAAGCGAAAGGGAGCCGCTGGAAAGAAAAAAAGG
AAGTCCAGCAAGGTGTGCAAACCT GTAAGAGCATGCTCCTATTGAAGATT
GTGAAATTTCTTCGAGATAGGATCGGTTCATGGTACAGAATCGTGTAGAC
CGACGGCCGTCGCTCGAGAACCCGTGTGGTGGAATCTTTCATCATCACCT
TGTTTCAAACGTTTTTTGTTCCATGTCTAGCTCTGAGTTGTTGTGCCATG
TCTAGTGCTGAGTTGTTGTGTGTCTCCGACGCGTTGGAGAGCCATACGTC
CAGCGAAAATTGTGCAAGGATTACCGTGATTTGTGCGCTCAAAACCGGGT
GTGGACGAGGTCCTGTCTCGCCTCTGTACTGTATTCGAAAGCTAGAAAAA
CCGTCATAGGCAACATAGGTTAGGGTAAGGGTGACTCTTTGTCTTTGTCT
ACTCCCATGTTGAATGCTATTTTGCGATACACGCAGGGTAGCTTGTGATG
AAGGAAACTGAATTAGTGGCTTCGCCTTGCAGAACGTGAGAGGAGGTGCT
GGAAAGGATAGAGGGGCAGAAGTGTTTTACAGAGTTAAGGCGACAATAGC
GACATTGACAAGGATGAGCCTTGGTGTCTATTGTTTTCACAACTGCAGCC
GCGCCACCCAACGCCCCCAGGTGGTACTGGACGAGGTCGACCTATCGGTA
TCCCCCGGGAGCGACTCCAAAGCATCAGGGCCGGCGGGTAGTTCTCACAA
CCCTGCTCCCTCTCCTTCGACTGGCGGCAAGATTAAGGCCGGCTGGTATC
GTCGACTTCTGGGAGAGGCCTTGCTCAAGGTAGAGCTGGATCGGGTGGAA
CGGTCGAAAGGGCTGGAAGTTGCCAACGCGCTCTCGGCGCCGTGGCGAAA
AGAGTTCGTCAAAAATGCCAAGACC GTGAGTCGTATGGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGGAGGAGGGAGGGAGAGAGAGAGAGAGATGT
CGGGAGTGTGACCATTTTAGATCCCGGCTCAAATGTATGCGAAGCTTTCG
AGGTCTTGATCATGGGGGCCTTGCTGGGAAGCATCCCCGTGAACAGACAT
CGAGTTATCAGGAAAAGCTTTATTCGAAGGTGGGGGGACTTGAACATGTC
GCACCATCCTTACGGGTCTCTGCTACTAACCTACAATCGATGCAGCAGCC
ACGTCAAGTCTTGGGGAGTGTTGCACGCGACCGGGTGGTTCGAATAATGC
ATCATTCATTTTCATAGCGGAACATGTTGCCAACCCGGGTTTGCAAAACG
GCCGGTGGTGTGCCGTCTGACGAGACCATGCCAATCCTGTGGCGCGCAAC
GCACTCGAAGCAGCAGGAAGGCTGGAGAATTCAATGCTCGCACTAAAAGA
CATTCTGTAACTGCCCCATCCCAAGATATATGCGCTCACGCCGAGCGGTC
ATTGGATGGCGGCGAAGCTGGAGCGGGCGATAGCCGAGGGATCGAGACAC
GGAGCATCCGCCAACTCAACTGCCACCGCCAGCCCTATCCTCAACCGCAG
CTCGTACGCGAGCTTCTCGGAGACGGACGGCGGGGGCGGAGGCGGGACCG
CCGCATCCCCGCACAACGGGCACTCTCCGCTGGCGCCGACGAGGGCCGGC
GGAGGCGCCAAGCCCGGTGTCAGGCTGCTGATTGATAATCGGGAGAAAAG
GGGGGCCACGAAAAACAGCCAG GTGATTTGGTCGGTTGGATGATCGAGAT
GGAGAGGTAAATTTATCTGGCGTGTTGATTGGTTGGGGTTTGCTCGGGAA
GAGTGGGGGTGGGTGAGTGTTCTGCTGGACCATGAAGCACGTTTTGATCA
TCTGTGCGACGGTATTTGCCCCGGTCGGAAGCTGATACGGTGCGTGTCCT
CGAGTAGGACGCGGTTCTCACGCGCGTTGATGTTGTACCTGGTCCAGCTT
CCCTTCTTTCAAGGTCCCGGGCCATAACCCACACATCGCGCATTTCGATA
AATGTAGCGCCCACCGGCGCTAAGAGTGAATGGCCGAACGAACCCGATGC
CGGCATAGAAACAGGGTAGGGAGGGCTCTTCGAGTTCTTCTCTCGAACAG
GAGCCACAGACGGCTTCACCCGAAAAAATGTTCAACACGGCAGGCAGGGC
CCACAGCATTCTGTTCTTCGTTCCTAGCAGGGTGACCCACTCACAGAGGC
ATGCATGTTGTTGGGGAGTTGCTCCCCTTTCTCCTCCCCCCTTCAAAGCG
AACGCTCTCGCCTCCGGACCGACAAGCTTGTAACAGATCGAGCTCGTCGA
CGTGTCCTTGGATCATATTCCCCAACGGCCGTTCCCACCCTGTGCGTGAC
CCTCTCCCGTCCCCAAAACGAAGATTTCCCACATGACAAGCTTCCTGAAC
AGCCGCGGCGTGCCGTACGAGGTGCGGGAATGGAAGATGGGGGACTACGG
ATGGATCGTGCAGCCGGACGCAGGGAAACCTCCCTCAGCAGGGGAG GTAC
GTTTTGCTCTCCAGCTTGAGATATACATGTACGCATGTACAAAGCCTCCC
GCAAATCACCACGCAGTCAGTGTAGAGACAGCGTTGTTGAAAGGTCGAGA
GTCGACCCGAGCGTCTTTGTGCGCTTTTTTTTCCGCATCTTGTTGGTCGC
CCGAACAGTCAGTCGATTTCTGCCTGTCATCTTTCAGAATTCACTCGTGG
AACCCATGTGTCTCACACTACCCCCTCACCATGCTGTATCTGATCTTGTA
GGTAGGGTACGAGAGGGAGTTCGTGGTGCCGCGGCTCCTGGAGAGGAAGC
GCGTCGATGACCTCGCCGAGTCCATCAAGGACGG GTGAGTCAGTAGATAA
CGAGGCAAAAGCGGGTTGAGGAGCGTGTGGGGTGGGGCGCGAAAGCAGTC
GAGGGGGGCTGGAGCGTAAGCCGATGGCTTCAACGAGTCCGAATAGCTGG
AAGGTGGGATGGAGGGGGAAGAGTCGGTGCCCTTGCGAGTCCATAGGGGT
GAACTCGACAAACGTACTTGGATCATGAAAGGGTAGTTAAATGCAGCCGC
CTGCATCATAACATCATAACCAAAAGGTGGAACGAAGTCAAACGTCCAGA
ACAATTTTAACAATAAAAATCGCCTACAGTATGGTAGAATGGTGAGCCTC
GCATACCTACGGACAGCCAGGTCGTGGGTTCGATTCTCGGTGAGGTAGCA
CGATCTGGGGATTTTTCTCACATGTGCGTAGCGACAAGGATTAAGGAAAG
CACCGCAGAACGAGGGCAAAGGAAAGAAAGCTCCTGATTGGCCTTCCTCC
TGATAGACCCTGGCTGGTGCGCCTGCCTGCCTACGTCAAATTCCAAATTC
CGCTTGTCTCTCTGCTTCTGTGCCGTTGCCATTGTACTCGTGAGCTCTCG
GGCCTCACGAAATAGCCATCCATTAATGTATACGTTTCATCAGCCCTCTA
CATGTAGCGAACTTTCCCCTCGTGAGTACAGACAGGCTAGCGTCCACATA
GATGGGACGAAAAAACAAAGCAAATGCCAGCGAATATGCAATGCTCAATT
AAAAAAAATTCATGCACTCCGGGATTTCAACGTATTTTCCATCTGCAGGC
GCCTAGGCCGCCAGAAAAATGCCATGCTGCGAGCCAAGAACGAAGGGGTT
GTGTCGGAGGTAGAACTGCACTTGGAGGGGGACACGGAAGATTCGCGGTA
CTCGGACGAGATTTATCGCCGAGGATTAACTCCCCAGGATCTTGACAAGG
CACTACATCAGTCGGAAGCACAGGGCTTCAAG GTGCTCCCTCGTTGTCCA
CGTTGTTGTGAACTGTTTGTCGGTTCGCGGGAACGCGGCTGCCGATCTCT
TTTGAAGTGATGCATATCAGGCTATTAGCACTTCGAGTGTTATTGTTCGA
ATGGTGAGGTGCCCAGCAAAAATTCATGTCTGTGCATCACGTAAAATCCA
ATAATTCCTCACATCAACACTCACAGTCCTACTTGCTTGTCCCCCGTCAC
ACCCCGTCCCCCGCGTACGGTTTGGGCCACGGCATCGACTTTGTATTTCT
CTTCCGTGCAGATCGTGCGCCACCGCAACTTCTGCGATTTCAGCGTCTAC
CTCGCGGATGCCACCCAAGCCCTCCAGAAAGTGTTCGACGCCAAGTCCCT
CGACTTCGAATCCTTCGTTACTTGGCAAAACTTCATCCGCTTCTCCAAGG
GCCAGATCCCTCTGACGCCCAAGGGAGCGGCTGCCGCCGCCGCCGCTGAA
AAAGCTGCCGCCATCGCCAAAGCCGCGCGCGGGGGAAAGCGAGGTCGGCC
GCCGATATCGGCGGTGGGTGGTGGAGGGCGGGGTAGACCTCCCCCCTCTA
CTGCTGCCGCTTCTGAGGTGGGGGCGGGCTTACGCCAGCGTACTCTTGAT
GGCGTTTTCGGGATCGCGGGAAGATCGAGAGGTGCTG GTGAGGGTAGCTA
GCGGGCGCGTGTATGAGGCGGAGAAATGTGACCCTTATAGCCGTGGTGGA
ATCACGCAGGGTGTGCAAGAGGACGGCGGAGGTGACAGCGGTGGGGGCTC
GTTCTCGAAACCGACGGTGTCGTGGAGAGAAAATGCAATTGCTGTGGATG
CTGATGGCGTCCTGCCTCCTGACTCTGGCGCAGGCTGTGATTCCTCTTCC
GATGACTGCAGCATCGTAGAAGTTGTTCGTCGAGGTGCTAGTGGTGGTCC
AGGTTCCGGTTCTGCTACCGCTGCTCCCACCTTGCGTGACGGTGGTGCTG
GCGCGGGCGGCAGGAAAGAGGAAGGCGCCGGCAGAGGCGGGGACCTCGCC
ATTCACCATCGCTGCAGCTGGAGGCTACTCCCCCGCTGCTGCTAG GTTTA
AAAGAGCACCACCAAAAATATTGTCGCTGTCGAAATCCGCAGTGGCAGCG
GGCTCGCCTGAACAGTTGCTTCACAAGCAACACGAGCGGAGGGATAGTTC
TCCGCTGCCCACGACGTTGGGAGGGAGGGACCGGGGAGGCGGGGAGACTC
AGAGCGGCTGGCCGGACCAGAACTCAAGCAGGCGCAGCAAGAGTCCCCAG
CCAATCGACGAGTGCGGCGGGCCTTTTTCTTCGCGGTATTGCGGCGGCGG
CGGGCTTGGCAGCGGTGACAGCAGTAGGGGAGGTTCGAGAGTGTCGGCAG
CAGCCACCAAGAAGGCGCGCTCGCTTTCGTTCGGCGACGACGATGGTGAT
GGTGAAGTTGAAGATGACCATGGCAACAACCACACAGGCGGGAATGACAG
TGGTAGGAGCGGCGGTGGCGCCGCCCACAATGGTGTATCGGGAGTTTTGC
GGCCTCATACCTCCGGGAGCGGCAGCGGTGGCAGTCGCGTTTCTCTGCCT
GCCGGTTCGGGCCCGACGGATGACGGTGGAGTGGTGGACCTTAGTCTGGA
TAGCCCGTCGCCTCCTGTACCGCCGCGCTCTCGGCCGCGAATCGCCGTTT
CACCGCCGCCGCAACGGCAACCGAACAACTCGAACGGCGCGGGAGTGAGT
AGAGAGACCGAGGAGGATAGAGTTGTGTTGGAAGCTGGTTCGTCGGACGA
CGACTTCGCCATG back to top Coding sequence (CDS) from alignment at P-lacustris_contig100:108890..118602-
>mRNA_P-lacustris_contig100.104.1 ID=mRNA_P-lacustris_contig100.104.1|Name=mRNA_P-lacustris_contig100.104.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3438bp|location=Sequence derived from alignment at P-lacustris_contig100:108890..118602- (Pleurocladia lacustris SAG_25_93) back to top