mRNA_P-lacustris_contig100.104.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig100.104.1
Unique NamemRNA_P-lacustris_contig100.104.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE)

HSP 1 Score: 560 bits (1443), Expect = 8.780e-177
Identity = 375/713 (52.59%), Postives = 417/713 (58.49%), Query Frame = 2 
Query:  929 VKTATFLRSVYCDEHFKEMGGGVGKRKGAAGKKKRKSSKVCKPVVLDEVDLSVSPGSDSKASGPAGSSHNPAPSPSTGGKIKAGWYRRLLGEALLKVELDRVERSKGLEVANALSAPWRKEFVKNAKTIYALTPSGHWMAAKLERAIAEGSRHGASAN---------------------------------------------------------STATASPILNRSS--------------------------------------------------------------------------------------------------YASFSETDGGXXXXTAASPHNGHSPLAPTRAGGGAKPGVRLLIDNREKRGATKNSQISHMTSFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQGFKIVRHRNFCDFSVYLADATQALQKVFDAKSLDFESFVTWQNFIRFSKGQIPLTPKGAAXXXXXXXXXXXXXXXXXXKRGRPPISXXXXXXXXXXXXXXAAASEVGAGLRQRTLDGVFGIAGRSRGAEDGGGDSGGGSFSKPTVSWRENAI-------------AVDADGVLPPDSGAGCDSSSDDCSIVEVVRRGASGGPGS 2563
            VK ATFLRSVYCDEH+ EMGGG  KRK AAGK K KS K C P+ LDE+DLS    SD  A   AGS+H+P PSP  GGKIKAGWYRRLLGEALLKVEL RVE+ KG +VAN L+A WRKEFVKNAKTIY+LTP+G WMA +LERAI EG   GAS+                                                          S  T S +L R                                                                                                    YAS SE DG XXXXTAAS  NGHSPLAPTRA G AKPGVRLLIDNREKRG T NSQISH+T++LNSRGVPYEVREWK+GDYGW+VQPDAGKPP+AGEVGYEREFVVPRLLERKRVDDLAES+KDGRL RQK AMLRAK+EGV +EVE+H+EGDT D R+ DEIYRRGLTP+DLD+AL Q+E QGFK+VRH +F  FS YLADATQ+LQ  F+A+SLDFESF TWQN IRFSKGQ+P+TP  A XXXXXXXXXXXXXXXXXX+RGRPP S               A      GLRQRTLDG FG+A R      G G + G   +      RE +              A+D DG   PD GA  DSS D CS+VEVV R   GG GS
Sbjct:  199 VKPATFLRSVYCDEHYTEMGGGXXKRKKAAGKDKGKSGKACDPMALDELDLSPLE-SDRNA---AGSAHDPPPSPPKGGKIKAGWYRRLLGEALLKVELHRVEKWKGPDVANGLTALWRKEFVKNAKTIYSLTPNGEWMATRLERAIGEGPGSGASSGNVNATTFDLAPLQWWDGAVCRVFAGPGYVSEGMNQKLAIILSFAGEGGDRGVGAKCISLETWSLLLGRGPLSDWGMHIRSSDCPKTCSNCHAVVKSRAEAHQYQESYGNFVFCTWRGGGGGRPWSDRRKPVRPSDPKKTRSDCDRSLPPYSCHRPVNITDDKDNDNDRYASCSERDGXXXXXTAASTRNGHSPLAPTRANGAAKPGVRLLIDNREKRGVTSNSQISHLTNYLNSRGVPYEVREWKIGDYGWVVQPDAGKPPAAGEVGYEREFVVPRLLERKRVDDLAESMKDGRLVRQKKAMLRAKSEGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFASFSAYLADATQSLQIQFEARSLDFESFFTWQNLIRFSKGQVPVTPTSAXXXXXXXXXXXXXXXXXXXRRGRPPTSAVAGGCGRPPLASRPACG----GLRQRTLDGAFGVARRGEDIARGSGKAEGDCAAVGDARVREESAESRAPKAASTWEGAIDIDG--SPDPGAASDSS-DGCSVVEVVVRPIDGGGGS 900
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BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: D7FIK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK4_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 1.360e-118
Identity = 201/260 (77.31%), Postives = 215/260 (82.69%), Query Frame = 3 
Query:  159 MASNWGPDPRMLAFPITKPPPTRWEDVSRVHGRCSRHWGLIRGLIVEQKKARNNRSSSSARLTATLFREVVTRLSLSLEAVDTKDKFNSTPGVGEMIHKMGEKYLVAQVTARNPKHQPSAKMFVASPAAILVAMSREGKRRATASDVAGATDGD-GTTAXXXATVWLREKEIRALAAPLCEEDLTHRGDEIVLGEVENFAWSSMAHLISNTKFDCVMRKDLDEKSAIAQLEEHRERPVCNSLACVAFATKSMGDLSEESK 935
            MAS+W  DPRMLAFPITKPPPTRWEDVS VHGRCSRHWGLIRGL+ EQKKAR NR SSSARLTATLFREVV RLSLSLEAVDTKDKF+ TPGVGEMI KMG K+L AQVTARNPKHQPS K FVAS AAILVAMSRE KRRAT  DV   ++G  G  A      W  EKEIR LAAPLCEEDLTHRGDEIVLGEVENFAW SMA+L ++ KFDCV RKDLDEK+ IAQL+E  ERP+C+S  C A+ATKSMGDLSE  K
Sbjct:    1 MASDWALDPRMLAFPITKPPPTRWEDVSCVHGRCSRHWGLIRGLMEEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMIQKMGAKHLAAQVTARNPKHQPSNKTFVASAAAILVAMSREVKRRATVVDVTSESNGGKGPPAAAAPAAWFTEKEIRRLAAPLCEEDLTHRGDEIVLGEVENFAWCSMAYLTNHNKFDCVARKDLDEKATIAQLQELGERPICSSPGCNAYATKSMGDLSERVK 260
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BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: D7FIK5_ECTSI (ERCC4 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK5_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 2.900e-60
Identity = 162/265 (61.13%), Postives = 187/265 (70.57%), Query Frame = 2 
Query: 1805 IKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQGFKIVRHRNFCDFSVYLADATQALQKVFDAKSLDFESFVTWQNFIRFSKGQIPLTPKGAAXXXXXXXXXXXXXXXXXXKRGRPPISXXXXXXXXXXXXXXAAASEVGAGLRQRTLDGVFGIAGRSRGAEDGGGDSGGG---------------SFSKPTVSWRENAIAVDADGVLPPDSGAGCDSSSDDCSIVEVVRRGASGG 2554
            +KDGRL RQK AMLRAK++GV +EVE+H+EGDT D R+ DEIYRRGLTP+DLD+AL Q+E QGFK+VRH +F  FS YLADATQ+LQ+ F+A+SLDFESF TWQN IRFSKGQ+PLTPK AAXXXXXXXXXXXXXXXXXX  GRPP S   XXXXXXXX    A+   G GLRQRTLDGVFG+A        GGG++ G                S +    S RE AI +D      PD G+  DSS D CS+VEVV R   GG
Sbjct:    1 MKDGRLVRQKKAMLRAKSDGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFAAFSAYLADATQSLQRQFEARSLDFESFFTWQNLIRFSKGQVPLTPKSAAXXXXXXXXXXXXXXXXXXXXGRPPTSAAAXXXXXXXX----ASRPAGDGLRQRTLDGVFGVARSGEDGASGGGEAEGNCPAVGGARGREETAESHAPKAASTREGAIDIDGS----PDPGSASDSS-DGCSVVEVVVRPIDGG 256
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BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: UPI0007E7B1B1 (crossover junction endonuclease MUS81 n=1 Tax=Drosophila eugracilis TaxID=29029 RepID=UPI0007E7B1B1)

HSP 1 Score: 86.7 bits (213), Expect = 5.470e-14
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 2 
Query: 1562 LLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
            LL+D +E  G  KN ++   T S+L S GV YEVR   +GD+ W+ Q   G            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++  + ++  VE +  GD E         + GL  + L +AL  ++ Q G ++VR  N      YLA  +++L ++F +K L
Sbjct:  155 LLVDTQETSG--KNKRVLDQTGSYLESLGVRYEVRRLTVGDFLWVAQDKQGN-----------ELVLPYIIERKRMDDLASSIRDGRFHEQKHRLQQSGLKKIIYLVEDY--GDNE---------QLGLPLESLQQALANAKVQSGVQVVRTENHYRSMSYLAGMSRSLDQIFSSKRL 308
[Close]
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: B3MYD5_DROAN (ERCC4 domain-containing protein n=3 Tax=ananassae subgroup TaxID=32347 RepID=B3MYD5_DROAN)

HSP 1 Score: 86.3 bits (212), Expect = 7.570e-14
Identity = 64/180 (35.56%), Postives = 95/180 (52.78%), Query Frame = 2 
Query: 1556 VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
            + LL+D +E  G  KN ++   T S+L S G  +EVR   +GD+ WI +  AG            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++    V+  VE +  GD E         + GL    L +AL  +  Q G ++VR  N      YLA  T++LQ++F  K+L
Sbjct:  158 ILLLVDTQETSG--KNKRVLDQTRSYLESFGAKHEVRRLTIGDFLWIAKDRAGN-----------ELVLPYIIERKRMDDLASSIRDGRFHEQKHRLKQSGLRHVIYLVEDY--GDNE---------QLGLPLDSLQQALANARVQTGVQVVRTENHYRSMSYLASMTRSLQQIFARKTL 313
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BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: A0A6P4J586_DROKI (crossover junction endonuclease MUS81 n=2 Tax=montium subgroup TaxID=32352 RepID=A0A6P4J586_DROKI)

HSP 1 Score: 83.2 bits (204), Expect = 7.150e-13
Identity = 62/180 (34.44%), Postives = 95/180 (52.78%), Query Frame = 2 
Query: 1556 VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
            + LL+D +E  G  KN ++   T S+L S G  +EVR   +GD+ WI +  AG            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++  + V+  VE +  GD E         + GL    L +AL  +  Q G ++VR  N      YLA  +++L ++F  K+L
Sbjct:  154 ILLLVDIQETSG--KNKRVLDQTRSYLESLGAQHEVRRLTIGDFLWIAKDPAGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLKQSGLKHVIYLVEDY--GDNE---------QLGLPLDSLQQALANARVQNGVQVVRTENHFRSMAYLASMSRSLAQIFGQKTL 309
[Close]
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: A0A1W4VFN3_DROFC (crossover junction endonuclease MUS81 n=1 Tax=Drosophila ficusphila TaxID=30025 RepID=A0A1W4VFN3_DROFC)

HSP 1 Score: 82.4 bits (202), Expect = 1.250e-12
Identity = 62/178 (34.83%), Postives = 92/178 (51.69%), Query Frame = 2 
Query: 1562 LLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
            LL+D +E  G  KN ++   T ++L S GV +EVR   +GD+ WI Q   G            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++    +V  VE +  GD E         + GL    L +AL  +  Q G ++VR  N      YLA   ++L ++F +K L
Sbjct:  154 LLVDTQETSG--KNKRVLDQTRNYLESLGVRHEVRRLTIGDFLWIAQDQKGN-----------ELVLPHIIERKRMDDLASSIRDGRFHEQKHRLQQSGLRNIVYLVEDY--GDNE---------QLGLPLDSLQQALANARVQTGIQVVRTENHYRSMSYLAGMGRSLGQIFASKRL 307
[Close]
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: Q29FN3_DROPS (ERCC4 domain-containing protein n=8 Tax=obscura group TaxID=32355 RepID=Q29FN3_DROPS)

HSP 1 Score: 82.4 bits (202), Expect = 1.540e-12
Identity = 64/180 (35.56%), Postives = 95/180 (52.78%), Query Frame = 2 
Query: 1556 VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
            V LL+D +E  G  KN ++   T S+L S GV +EVR   +GD+ WI +   G            E V+P ++ERKR+DDLA SI+DGR   QK+ + +     V+  +E +  GD E         + GL    L +AL  +  Q G ++VR  N      YLA  ++AL+++F +KSL
Sbjct:  184 VLLLVDTQETSG--KNKRVLDQTRSYLQSLGVDHEVRRLTVGDFLWIARDADGS-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLRQCGLLNVIYLIEDY--GDNE---------QLGLPLDSLLQALANTRIQSGIQVVRTENHYRSMCYLAGMSRALRQIFLSKSL 339
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BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: Q9V3T1_DROME (EG:BACR7A4.16 protein n=8 Tax=melanogaster subgroup TaxID=32351 RepID=Q9V3T1_DROME)

HSP 1 Score: 80.9 bits (198), Expect = 4.000e-12
Identity = 63/186 (33.87%), Postives = 94/186 (50.54%), Query Frame = 2 
Query: 1547 KPG---VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
            KPG   + LL+D +E  G  KN ++   T S+L S G  +EVR   +GD+ W+ Q   G            E V+P ++ERKR+DDLA SI+DGR   QK+ +     + ++  VE +  GD E         + GL    L +AL  ++ Q G ++VR  N      YLA  ++ L ++F  K L
Sbjct:  147 KPGQFQLLLLVDTQETSG--KNKRVLDQTRSYLESLGARHEVRRLTIGDFLWVAQDQEGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLQHCGLQHIIYLVEDY--GDNE---------QLGLPLDSLQQALTNAKVQTGVRVVRTANHYRSMSYLAGMSRTLGQIFAGKKL 308
[Close]
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Match: UPI0018A129DB (crossover junction endonuclease MUS81 n=3 Tax=suzukii subgroup TaxID=32353 RepID=UPI0018A129DB)

HSP 1 Score: 80.1 bits (196), Expect = 6.930e-12
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 2 
Query: 1547 KPG---VRLLIDNREKRGATKNSQISHMT-SFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGEVGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVELHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQ-GFKIVRHRNFCDFSVYLADATQALQKVFDAKSL 2089
            KPG   + LL+D +E  G  KN ++   T S+L S G  +EVR   +GD+ W+ Q   G            E V+P ++ERKR+DDLA SI+DGR   QK+ + ++    ++  VE +  GD E         + GL    L +AL  ++ Q G ++VR  N      YLA  +++L ++F  K L
Sbjct:  144 KPGAFQLLLLVDTQETSG--KNKRVLDQTRSYLESLGARHEVRRLTIGDFLWVAQDPEGN-----------ELVLPYIVERKRMDDLASSIRDGRFHEQKHRLQQSGLRNIIYLVEDY--GDNE---------QLGLPLDSLQQALANAKVQTGVQVVRTENHFRSMSYLAAMSRSLGQIFANKRL 305
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF35_9PHAE8.780e-17752.59ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIK4_ECTSI1.360e-11877.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FIK5_ECTSI2.900e-6061.13ERCC4 domain containing protein n=1 Tax=Ectocarpus... [more]
UPI0007E7B1B15.470e-1434.83crossover junction endonuclease MUS81 n=1 Tax=Dros... [more]
B3MYD5_DROAN7.570e-1435.56ERCC4 domain-containing protein n=3 Tax=ananassae ... [more]
A0A6P4J586_DROKI7.150e-1334.44crossover junction endonuclease MUS81 n=2 Tax=mont... [more]
A0A1W4VFN3_DROFC1.250e-1234.83crossover junction endonuclease MUS81 n=1 Tax=Dros... [more]
Q29FN3_DROPS1.540e-1235.56ERCC4 domain-containing protein n=8 Tax=obscura gr... [more]
Q9V3T1_DROME4.000e-1233.87EG:BACR7A4.16 protein n=8 Tax=melanogaster subgrou... [more]
UPI0018A129DB6.930e-1233.87crossover junction endonuclease MUS81 n=3 Tax=suzu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:108890..118602 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score87.8
Seed ortholog evalue1.8e-14
Seed eggNOG ortholog7217.FBpp0125310
Preferred namemus81
KEGG koko:K08991
KEGG Pathwayko03440,ko03460,map03440,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000280,GO:0000712,GO:0000724,GO:0000725,GO:0000727,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007093,GO:0007127,GO:0007131,GO:0007346,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0022402,GO:0022414,GO:0031297,GO:0031570,GO:0031573,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0044773,GO:0044774,GO:0045005,GO:0045132,GO:0045786,GO:0045930,GO:0046483,GO:0048256,GO:0048257,GO:0048285,GO:0048476,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051304,GO:0051307,GO:0051321,GO:0051716,GO:0051726,GO:0061982,GO:0065007,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901576,GO:1903046,GO:1903047
EggNOG free text desc.It is involved in the biological process described with DNA metabolic process
EggNOG OGs39FPI@33154,3BGR6@33208,3CVZN@33213,3SHUA@50557,41U8G@6656,4517T@7147,45SH7@7214,COG1948@1,KOG2379@2759
Ec32 ortholog descriptionERCC4 domain containing protein
Ec32 orthologEc-27_000090.1
COG Functional cat.L
Best tax levelDrosophilidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons14
Model size3419
Cds size1719
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.104.1prot_P-lacustris_contig100.104.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig100 109608..114453 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815265.877974-UTR-P-lacustris_contig100:108889..1096071622815265.877974-UTR-P-lacustris_contig100:108889..109607Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 108890..109607 -
1693493438.4399953-UTR-P-lacustris_contig100:108889..1096071693493438.4399953-UTR-P-lacustris_contig100:108889..109607Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 108890..109607 -
1622815266.0233686-UTR-P-lacustris_contig100:114453..1144841622815266.0233686-UTR-P-lacustris_contig100:114453..114484Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 114454..114484 -
1693493438.5545292-UTR-P-lacustris_contig100:114453..1144841693493438.5545292-UTR-P-lacustris_contig100:114453..114484Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 114454..114484 -
1622815266.0360312-UTR-P-lacustris_contig100:114837..1149401622815266.0360312-UTR-P-lacustris_contig100:114837..114940Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 114838..114940 -
1693493438.5683587-UTR-P-lacustris_contig100:114837..1149401693493438.5683587-UTR-P-lacustris_contig100:114837..114940Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 114838..114940 -
1622815266.0463905-UTR-P-lacustris_contig100:115423..1155361622815266.0463905-UTR-P-lacustris_contig100:115423..115536Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 115424..115536 -
1693493438.5775187-UTR-P-lacustris_contig100:115423..1155361693493438.5775187-UTR-P-lacustris_contig100:115423..115536Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 115424..115536 -
1622815266.0556781-UTR-P-lacustris_contig100:115931..1161041622815266.0556781-UTR-P-lacustris_contig100:115931..116104Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 115932..116104 -
1693493438.5855436-UTR-P-lacustris_contig100:115931..1161041693493438.5855436-UTR-P-lacustris_contig100:115931..116104Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 115932..116104 -
1622815266.066876-UTR-P-lacustris_contig100:116629..1167451622815266.066876-UTR-P-lacustris_contig100:116629..116745Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 116630..116745 -
1693493438.59642-UTR-P-lacustris_contig100:116629..1167451693493438.59642-UTR-P-lacustris_contig100:116629..116745Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 116630..116745 -
1622815266.0761259-UTR-P-lacustris_contig100:117262..1174151622815266.0761259-UTR-P-lacustris_contig100:117262..117415Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 117263..117415 -
1693493438.6055565-UTR-P-lacustris_contig100:117262..1174151693493438.6055565-UTR-P-lacustris_contig100:117262..117415Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 117263..117415 -
1622815266.085732-UTR-P-lacustris_contig100:118309..1186021622815266.085732-UTR-P-lacustris_contig100:118309..118602Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 118310..118602 -
1693493438.6150181-UTR-P-lacustris_contig100:118309..1186021693493438.6150181-UTR-P-lacustris_contig100:118309..118602Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 118310..118602 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815265.890687-CDS-P-lacustris_contig100:109607..1099331622815265.890687-CDS-P-lacustris_contig100:109607..109933Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 109608..109933 -
1693493438.4513319-CDS-P-lacustris_contig100:109607..1099331693493438.4513319-CDS-P-lacustris_contig100:109607..109933Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 109608..109933 -
1622815265.90462-CDS-P-lacustris_contig100:110015..1103911622815265.90462-CDS-P-lacustris_contig100:110015..110391Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 110016..110391 -
1693493438.4604163-CDS-P-lacustris_contig100:110015..1103911693493438.4604163-CDS-P-lacustris_contig100:110015..110391Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 110016..110391 -
1622815265.9156299-CDS-P-lacustris_contig100:110670..1108541622815265.9156299-CDS-P-lacustris_contig100:110670..110854Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 110671..110854 -
1693493438.4697464-CDS-P-lacustris_contig100:110670..1108541693493438.4697464-CDS-P-lacustris_contig100:110670..110854Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 110671..110854 -
1622815265.9323177-CDS-P-lacustris_contig100:111618..1117011622815265.9323177-CDS-P-lacustris_contig100:111618..111701Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 111619..111701 -
1693493438.4888968-CDS-P-lacustris_contig100:111618..1117011693493438.4888968-CDS-P-lacustris_contig100:111618..111701Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 111619..111701 -
1622815265.9450371-CDS-P-lacustris_contig100:111956..1120791622815265.9450371-CDS-P-lacustris_contig100:111956..112079Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 111957..112079 -
1693493438.5035903-CDS-P-lacustris_contig100:111956..1120791693493438.5035903-CDS-P-lacustris_contig100:111956..112079Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 111957..112079 -
1622815265.9544637-CDS-P-lacustris_contig100:112730..1130271622815265.9544637-CDS-P-lacustris_contig100:112730..113027Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 112731..113027 -
1693493438.513406-CDS-P-lacustris_contig100:112730..1130271693493438.513406-CDS-P-lacustris_contig100:112730..113027Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 112731..113027 -
1622815265.9657524-CDS-P-lacustris_contig100:113527..1137821622815265.9657524-CDS-P-lacustris_contig100:113527..113782Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 113528..113782 -
1693493438.5236616-CDS-P-lacustris_contig100:113527..1137821693493438.5236616-CDS-P-lacustris_contig100:113527..113782Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 113528..113782 -
1622815265.976033-CDS-P-lacustris_contig100:114378..1144531622815265.976033-CDS-P-lacustris_contig100:114378..114453Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 114379..114453 -
1693493438.5430324-CDS-P-lacustris_contig100:114378..1144531693493438.5430324-CDS-P-lacustris_contig100:114378..114453Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 114379..114453 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig100.104.1

>prot_P-lacustris_contig100.104.1 ID=prot_P-lacustris_contig100.104.1|Name=mRNA_P-lacustris_contig100.104.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=573bp
MGGGVGKRKGAAGKKKRKSSKVCKPVVLDEVDLSVSPGSDSKASGPAGSS
HNPAPSPSTGGKIKAGWYRRLLGEALLKVELDRVERSKGLEVANALSAPW
RKEFVKNAKTIYALTPSGHWMAAKLERAIAEGSRHGASANSTATASPILN
RSSYASFSETDGGGGGGTAASPHNGHSPLAPTRAGGGAKPGVRLLIDNRE
KRGATKNSQISHMTSFLNSRGVPYEVREWKMGDYGWIVQPDAGKPPSAGE
VGYEREFVVPRLLERKRVDDLAESIKDGRLGRQKNAMLRAKNEGVVSEVE
LHLEGDTEDSRYSDEIYRRGLTPQDLDKALHQSEAQGFKIVRHRNFCDFS
VYLADATQALQKVFDAKSLDFESFVTWQNFIRFSKGQIPLTPKGAAAAAA
AEKAAAIAKAARGGKRGRPPISAVGGGGRGRPPPSTAAASEVGAGLRQRT
LDGVFGIAGRSRGAEDGGGDSGGGSFSKPTVSWRENAIAVDADGVLPPDS
GAGCDSSSDDCSIVEVVRRGASGGPGSGSATAAPTLRDGGAGAGGRKEEG
AGRGGDLAIHHRCSWRLLPRCC*
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mRNA from alignment at P-lacustris_contig100:108890..118602-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig100.104.1 ID=mRNA_P-lacustris_contig100.104.1|Name=mRNA_P-lacustris_contig100.104.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=9713bp|location=Sequence derived from alignment at P-lacustris_contig100:108890..118602- (Pleurocladia lacustris SAG_25_93)
GCATCCCCGCCTGCCCTGACTACAGCAGTTGTGGGTGGTGCTGTCCTGTG
GGCGAGGTTGCAGGCGGTAAGGTTGGTTCTGGCGGTGCGGAACTGTTCAA
CGAGAGTGCGAAGCCTCCCACACGCGCAGACACTTGCGAACTTTACTCGC
GAGAGACGATGGCTTCGAATTGGGGGCCAGACCCTCGGATGCTGGCCTTC
CCCATCACCAAGCCGCCTCCGACGAGATGGGAAGATGTATCACGTGTGCA
CGGCAGGTGTTCCCGTCACTGGGGACTTATTCGTGGTCTCATCGTGAGTC
GACGATCGCCTTATGTTTTGGCTTACCTTCGAACTTTTGCAGTGCACTAT
TTGTATATCTAGGGTGGTCCGTTGAGAAATTTGGTGCGCGCCTGAATTTG
TAGCATACAAAACGAGCTACATGTAAACTTGAACGAGGGAGCGTAGCGCG
TGATGCGATTGCGGTTCCCCGATGTAAACGGCAGACTTGACTTCTGTAGT
ACAAAGGGAAGGACACGCGTCGCGCGTAACGGTGAAAATGTTCAACAACC
GTAGTTGGTACTTTAGTGATGGCGTAAATGGCTTTTACCGTCGGATCTTG
AGCTTCAAGTGGCGAACATCGAACACCTGTTGAAACAGAAATTGATTCAT
ATATCTCGTAGCAAAACATACACCTTCTCCTTTGAAGTGCTTTCTTTTCC
TAGACCAAATCAGCAACAAGAAAATCAGGCAGATCGCCAGTTGGCGAGGG
AAAACAGATCCAGCGGCAGCAGCGCGAGAGACCAAAAAAGGCTAAAATCA
AACCAAATCAAACCAAACCAAGTCAAACCTGCAAGCGCGCCTTTTGCCGC
GATTGTCGCGACTCCTTTGTCGCATTTATACAACATCATGCATGGTGAGA
AGGGGAGACACATGCCGAAACCCTCTCGCGCGAACAGATTGACCAACGCG
TGCAACGTGGAGTTCTTCTGTGTGACCCCGGTTCGGAGGTCTTCCGCTGG
AGAGAGGAGGCCGTAGGACAGGTAAAAGGTCCAATCCACGAGCGACGATT
ACTAGACAGGCTCGATCATCATCGACGTTAAAGAAAAACGGGCCACAGCT
ATACATCCCCAAGAGCTCACCTGCCTCATGTTTTCTCAACGTACCCAATA
CGGAAACCGCCCCGCCACGAAAAAAAAAAACGAACAGGTCGAGCAAAAAA
AGGCGAGGAATAACCGAAGCAGCAGCAGTGCACGACTGACGGCGACTCTG
TTCCGAGAGGTGGTGACCCGCCTCAGCCTCTCTCTTGAAGCGGTTGATAC
CAAGGATAAGTTCAACTCCACCCCTGGGGTCGGCGAAATGGTGCGTTTCG
AGGGTCAAGTTGTGCTATCACTGTTGCCACTGTTATTACGGTTGCTGTTG
GCGGTGGTCATCGGATCGTTTGCGGTCGATGTTGTGGTGGCAGCTGGTGC
CTCTGATTTTGTTGCATCACACCGTAATTTGCGACATTGAGCGGACAAGC
CACGTCGATGGCGCCACATACCGTCCACTTGCTCGAGGTTCTCGATCTAC
GTTGGGAAAAGGTAGGCTAGGCGGAGCACTATAAGTATGGTGAAATGGAA
GCGCCATATGGAATGTGGAAGGCCTCGTGCTGGACATTTTGTTTTTTCCT
GTAACCACGGGCTACATAGGAACTGTATGGAATATCTGCACCACATTTAT
TGTTTGGCAACAGCAACACAACGACCACAACAGTAACATAACGTCTTTTT
TGTGGCACGGAAGAGGCGAGTGTCCAATCAGATCGCTTCAGAATTAAGCG
CATGCGCATATTGCCCTGCCGCCTTATAACTTGAGCCATTCGATGCACCT
CTGGCAGATCCACAAGATGGGCGAGAAGTACTTGGTGGCACAGGTCACAG
CTCGAAACCCCAAACATCAGCCATCTGCCAAGATGTTCGTGGCGTCCCCG
GCGGCCATCCTTGTCGCAATGAGGTGCGCGCCGCGAAGATGGAGTTGTGG
TGCGGGAATCGTCGCTGTTGTTCATATCGCCATTGCTTTCGTCGCACATG
TTGTTTTTGGTACATCTCCCTTTTTTTTTCCTCCACGGTCTGACTGTTTC
GGGGCTCTGCTTCCCTGTTTTGAGCCACAACCTCCGGGTGTCCCAGCAAT
TCTTTCTTTTGTTGAGGTGTTTGTATTCATTGGGTTTGATTATGTCTCCG
CTAGCGTAGACCAGACCAGACTAGACTAGAGACCGTCGTCATATCCGTCA
CGTCTAGTGAGTGGTATGCTGACCTCTCTGTCGGTGTCTACGTGGCACAG
GAATAAATTAGACTATGTCCCATCATTGGTCGAACGGGTTTGTTGTCATC
GTCAGGGATTGTACAGGCATGTAAAGACATCCGTCACTCCGCTTTTGCGT
GGCACTGACGAGGGGCTGCGATTTTAGCTGTACTTCATCTACCTAACACT
GCGCAAATGGCAACAAAAATAACGATAACGACAACAATAACGCACCAGTC
GTGAAGGGAAACGTCGAGCGACGGCCAGCGACGTCGCCGGCGCTACTGAT
GGAGACGGGACAACGGCAACAGCCACAGCAACGGTGTGGCTCAGAGAGAA
GGAGATCAGAGCTCTGGCCGCCCCCCTCTGCGAAGAGGACCTGACTCACA
GAGGAGACGAGATCGTTTTGGGTGAGAAGAGTAGCAACAAACTAGCCTTG
GGGCAAGGAAAGAGACAAGGAGAGAGTCTGGACCGGTGGGTGGAGGGAAA
GGGGGCACGTGGATGGGGGCATATCCTTTTTTACCTTCTCACGACATGCG
TGGAAGACATCTGATCGGGGAGAGTGTAAGGAGCTAGAGTTGGCGTGGTT
GCTGCGGGCAAATAGAGGCACCAGAGCGACTGTGCGTGACCGGCAGGTTC
ACACGCGTTTAGGTCGTGTTTCCTGAAGGCTGATCGCGTGGTTGCGAAGC
GTCCTCCCCGGATAATTCGTGGGTAGGTGATTGAACGGAAGGATGGAAAA
ATATATCAACACTCATATCATTCACCTTCCCCTGATGCGTGGTTTCATGT
GAACGAACACGCGCAGGAGAGGTGGAGAACTTCGCCTGGTCGTCAATGGC
CCACCTCATCAGCAACACCAAGTTCGACTGCGTCATGAGGAAGGATCTCG
ACGAGAAATCCGCAATCGCCCAGCTAGAGGTAAGGTAATCCCGAACGGAT
GTCTGTATGGTTCTTGCTGTTGGCAGGTAGATGTAGAGTGCAGGTATGGT
CTTGTTGATGGTGATGGTGGTGGTGGTGGTGGCGGCAGCGGCGGCGGTAC
TGTTGATAGTGGGGGACGGTGGGGGCATTTCGGTGAATGTTTGCGTTACC
AGTATTGTTTGGGATGTGTCCCTGCTGGTGCTGGTGCTATTTGTCCTGAG
TCGTGTTGTGCCCTCAGTTTGTCTCACCTGCTCCTGACATTTTATCACCG
CTGTCGTCGCCGCCACTACTCCTACAGCTATTGCGACTACCGTCGGTAAC
TATTAGCTGGTATATTCGCACGGTCTAATCTAACTTGCTGCGCCTTGATT
ATCTCTCAGCAAGAGTCGAGAGAGGACGTCGTCGCTGACGACTTGACTTC
CAATGCCTTGATTAGCGTACCGACAATGCTGTTTGGCTTGGGTGCGATTT
GCATTGTTGCAGGAACATCGAGAGCGGCCGGTGTGCAACAGCCTTGCCTG
CGTGGCTTTCGCCACGAAGAGCATGGGGGACCTCAGTGAGGAGTCAAAAC
CGCCACGTTCCTAAGGTGATGCTATTAGTGTTGTTTCGAAAGTCGTGCTG
GTACACGAGACATTAGTTACCACCGCTTCTGCTTGTTGGTACTGTTGACT
TTGTGTTCTTTATTCCTGTAAGATTTTCTCTTGTCTCTTTCAGTATGATG
CGTTATGTTTGTGTCGAAAGCGTCGGCCTATGGGTTGCTACTATGGTTTA
CAGAATCGGAGCATGCGAACCCCCCAAACAAATCTACCGCCGCCAGCACG
ACTCACCATGACCATCACCCATTATTTGGCAGTTTGTCAGCCGTCATAGC
CCACGTACGTTTTTCTTTGCATGCTTTTACTGTTGACACATGTTTTGGGC
CGCTCGTATCCGCGGCAGGAGCGTTTACTGCGACGAGCACTTCAAGGAGA
TGGGAGGCGGCGTGGGTAAGCGAAAGGGAGCCGCTGGAAAGAAAAAAAGG
AAGTCCAGCAAGGTGTGCAAACCTGTAAGAGCATGCTCCTATTGAAGATT
GTGAAATTTCTTCGAGATAGGATCGGTTCATGGTACAGAATCGTGTAGAC
CGACGGCCGTCGCTCGAGAACCCGTGTGGTGGAATCTTTCATCATCACCT
TGTTTCAAACGTTTTTTGTTCCATGTCTAGCTCTGAGTTGTTGTGCCATG
TCTAGTGCTGAGTTGTTGTGTGTCTCCGACGCGTTGGAGAGCCATACGTC
CAGCGAAAATTGTGCAAGGATTACCGTGATTTGTGCGCTCAAAACCGGGT
GTGGACGAGGTCCTGTCTCGCCTCTGTACTGTATTCGAAAGCTAGAAAAA
CCGTCATAGGCAACATAGGTTAGGGTAAGGGTGACTCTTTGTCTTTGTCT
ACTCCCATGTTGAATGCTATTTTGCGATACACGCAGGGTAGCTTGTGATG
AAGGAAACTGAATTAGTGGCTTCGCCTTGCAGAACGTGAGAGGAGGTGCT
GGAAAGGATAGAGGGGCAGAAGTGTTTTACAGAGTTAAGGCGACAATAGC
GACATTGACAAGGATGAGCCTTGGTGTCTATTGTTTTCACAACTGCAGCC
GCGCCACCCAACGCCCCCAGGTGGTACTGGACGAGGTCGACCTATCGGTA
TCCCCCGGGAGCGACTCCAAAGCATCAGGGCCGGCGGGTAGTTCTCACAA
CCCTGCTCCCTCTCCTTCGACTGGCGGCAAGATTAAGGCCGGCTGGTATC
GTCGACTTCTGGGAGAGGCCTTGCTCAAGGTAGAGCTGGATCGGGTGGAA
CGGTCGAAAGGGCTGGAAGTTGCCAACGCGCTCTCGGCGCCGTGGCGAAA
AGAGTTCGTCAAAAATGCCAAGACCGTGAGTCGTATGGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGGAGGAGGGAGGGAGAGAGAGAGAGAGATGT
CGGGAGTGTGACCATTTTAGATCCCGGCTCAAATGTATGCGAAGCTTTCG
AGGTCTTGATCATGGGGGCCTTGCTGGGAAGCATCCCCGTGAACAGACAT
CGAGTTATCAGGAAAAGCTTTATTCGAAGGTGGGGGGACTTGAACATGTC
GCACCATCCTTACGGGTCTCTGCTACTAACCTACAATCGATGCAGCAGCC
ACGTCAAGTCTTGGGGAGTGTTGCACGCGACCGGGTGGTTCGAATAATGC
ATCATTCATTTTCATAGCGGAACATGTTGCCAACCCGGGTTTGCAAAACG
GCCGGTGGTGTGCCGTCTGACGAGACCATGCCAATCCTGTGGCGCGCAAC
GCACTCGAAGCAGCAGGAAGGCTGGAGAATTCAATGCTCGCACTAAAAGA
CATTCTGTAACTGCCCCATCCCAAGATATATGCGCTCACGCCGAGCGGTC
ATTGGATGGCGGCGAAGCTGGAGCGGGCGATAGCCGAGGGATCGAGACAC
GGAGCATCCGCCAACTCAACTGCCACCGCCAGCCCTATCCTCAACCGCAG
CTCGTACGCGAGCTTCTCGGAGACGGACGGCGGGGGCGGAGGCGGGACCG
CCGCATCCCCGCACAACGGGCACTCTCCGCTGGCGCCGACGAGGGCCGGC
GGAGGCGCCAAGCCCGGTGTCAGGCTGCTGATTGATAATCGGGAGAAAAG
GGGGGCCACGAAAAACAGCCAGGTGATTTGGTCGGTTGGATGATCGAGAT
GGAGAGGTAAATTTATCTGGCGTGTTGATTGGTTGGGGTTTGCTCGGGAA
GAGTGGGGGTGGGTGAGTGTTCTGCTGGACCATGAAGCACGTTTTGATCA
TCTGTGCGACGGTATTTGCCCCGGTCGGAAGCTGATACGGTGCGTGTCCT
CGAGTAGGACGCGGTTCTCACGCGCGTTGATGTTGTACCTGGTCCAGCTT
CCCTTCTTTCAAGGTCCCGGGCCATAACCCACACATCGCGCATTTCGATA
AATGTAGCGCCCACCGGCGCTAAGAGTGAATGGCCGAACGAACCCGATGC
CGGCATAGAAACAGGGTAGGGAGGGCTCTTCGAGTTCTTCTCTCGAACAG
GAGCCACAGACGGCTTCACCCGAAAAAATGTTCAACACGGCAGGCAGGGC
CCACAGCATTCTGTTCTTCGTTCCTAGCAGGGTGACCCACTCACAGAGGC
ATGCATGTTGTTGGGGAGTTGCTCCCCTTTCTCCTCCCCCCTTCAAAGCG
AACGCTCTCGCCTCCGGACCGACAAGCTTGTAACAGATCGAGCTCGTCGA
CGTGTCCTTGGATCATATTCCCCAACGGCCGTTCCCACCCTGTGCGTGAC
CCTCTCCCGTCCCCAAAACGAAGATTTCCCACATGACAAGCTTCCTGAAC
AGCCGCGGCGTGCCGTACGAGGTGCGGGAATGGAAGATGGGGGACTACGG
ATGGATCGTGCAGCCGGACGCAGGGAAACCTCCCTCAGCAGGGGAGGTAC
GTTTTGCTCTCCAGCTTGAGATATACATGTACGCATGTACAAAGCCTCCC
GCAAATCACCACGCAGTCAGTGTAGAGACAGCGTTGTTGAAAGGTCGAGA
GTCGACCCGAGCGTCTTTGTGCGCTTTTTTTTCCGCATCTTGTTGGTCGC
CCGAACAGTCAGTCGATTTCTGCCTGTCATCTTTCAGAATTCACTCGTGG
AACCCATGTGTCTCACACTACCCCCTCACCATGCTGTATCTGATCTTGTA
GGTAGGGTACGAGAGGGAGTTCGTGGTGCCGCGGCTCCTGGAGAGGAAGC
GCGTCGATGACCTCGCCGAGTCCATCAAGGACGGGTGAGTCAGTAGATAA
CGAGGCAAAAGCGGGTTGAGGAGCGTGTGGGGTGGGGCGCGAAAGCAGTC
GAGGGGGGCTGGAGCGTAAGCCGATGGCTTCAACGAGTCCGAATAGCTGG
AAGGTGGGATGGAGGGGGAAGAGTCGGTGCCCTTGCGAGTCCATAGGGGT
GAACTCGACAAACGTACTTGGATCATGAAAGGGTAGTTAAATGCAGCCGC
CTGCATCATAACATCATAACCAAAAGGTGGAACGAAGTCAAACGTCCAGA
ACAATTTTAACAATAAAAATCGCCTACAGTATGGTAGAATGGTGAGCCTC
GCATACCTACGGACAGCCAGGTCGTGGGTTCGATTCTCGGTGAGGTAGCA
CGATCTGGGGATTTTTCTCACATGTGCGTAGCGACAAGGATTAAGGAAAG
CACCGCAGAACGAGGGCAAAGGAAAGAAAGCTCCTGATTGGCCTTCCTCC
TGATAGACCCTGGCTGGTGCGCCTGCCTGCCTACGTCAAATTCCAAATTC
CGCTTGTCTCTCTGCTTCTGTGCCGTTGCCATTGTACTCGTGAGCTCTCG
GGCCTCACGAAATAGCCATCCATTAATGTATACGTTTCATCAGCCCTCTA
CATGTAGCGAACTTTCCCCTCGTGAGTACAGACAGGCTAGCGTCCACATA
GATGGGACGAAAAAACAAAGCAAATGCCAGCGAATATGCAATGCTCAATT
AAAAAAAATTCATGCACTCCGGGATTTCAACGTATTTTCCATCTGCAGGC
GCCTAGGCCGCCAGAAAAATGCCATGCTGCGAGCCAAGAACGAAGGGGTT
GTGTCGGAGGTAGAACTGCACTTGGAGGGGGACACGGAAGATTCGCGGTA
CTCGGACGAGATTTATCGCCGAGGATTAACTCCCCAGGATCTTGACAAGG
CACTACATCAGTCGGAAGCACAGGGCTTCAAGGTGCTCCCTCGTTGTCCA
CGTTGTTGTGAACTGTTTGTCGGTTCGCGGGAACGCGGCTGCCGATCTCT
TTTGAAGTGATGCATATCAGGCTATTAGCACTTCGAGTGTTATTGTTCGA
ATGGTGAGGTGCCCAGCAAAAATTCATGTCTGTGCATCACGTAAAATCCA
ATAATTCCTCACATCAACACTCACAGTCCTACTTGCTTGTCCCCCGTCAC
ACCCCGTCCCCCGCGTACGGTTTGGGCCACGGCATCGACTTTGTATTTCT
CTTCCGTGCAGATCGTGCGCCACCGCAACTTCTGCGATTTCAGCGTCTAC
CTCGCGGATGCCACCCAAGCCCTCCAGAAAGTGTTCGACGCCAAGTCCCT
CGACTTCGAATCCTTCGTTACTTGGCAAAACTTCATCCGCTTCTCCAAGG
GCCAGATCCCTCTGACGCCCAAGGGAGCGGCTGCCGCCGCCGCCGCTGAA
AAAGCTGCCGCCATCGCCAAAGCCGCGCGCGGGGGAAAGCGAGGTCGGCC
GCCGATATCGGCGGTGGGTGGTGGAGGGCGGGGTAGACCTCCCCCCTCTA
CTGCTGCCGCTTCTGAGGTGGGGGCGGGCTTACGCCAGCGTACTCTTGAT
GGCGTTTTCGGGATCGCGGGAAGATCGAGAGGTGCTGGTGAGGGTAGCTA
GCGGGCGCGTGTATGAGGCGGAGAAATGTGACCCTTATAGCCGTGGTGGA
ATCACGCAGGGTGTGCAAGAGGACGGCGGAGGTGACAGCGGTGGGGGCTC
GTTCTCGAAACCGACGGTGTCGTGGAGAGAAAATGCAATTGCTGTGGATG
CTGATGGCGTCCTGCCTCCTGACTCTGGCGCAGGCTGTGATTCCTCTTCC
GATGACTGCAGCATCGTAGAAGTTGTTCGTCGAGGTGCTAGTGGTGGTCC
AGGTTCCGGTTCTGCTACCGCTGCTCCCACCTTGCGTGACGGTGGTGCTG
GCGCGGGCGGCAGGAAAGAGGAAGGCGCCGGCAGAGGCGGGGACCTCGCC
ATTCACCATCGCTGCAGCTGGAGGCTACTCCCCCGCTGCTGCTAGGTTTA
AAAGAGCACCACCAAAAATATTGTCGCTGTCGAAATCCGCAGTGGCAGCG
GGCTCGCCTGAACAGTTGCTTCACAAGCAACACGAGCGGAGGGATAGTTC
TCCGCTGCCCACGACGTTGGGAGGGAGGGACCGGGGAGGCGGGGAGACTC
AGAGCGGCTGGCCGGACCAGAACTCAAGCAGGCGCAGCAAGAGTCCCCAG
CCAATCGACGAGTGCGGCGGGCCTTTTTCTTCGCGGTATTGCGGCGGCGG
CGGGCTTGGCAGCGGTGACAGCAGTAGGGGAGGTTCGAGAGTGTCGGCAG
CAGCCACCAAGAAGGCGCGCTCGCTTTCGTTCGGCGACGACGATGGTGAT
GGTGAAGTTGAAGATGACCATGGCAACAACCACACAGGCGGGAATGACAG
TGGTAGGAGCGGCGGTGGCGCCGCCCACAATGGTGTATCGGGAGTTTTGC
GGCCTCATACCTCCGGGAGCGGCAGCGGTGGCAGTCGCGTTTCTCTGCCT
GCCGGTTCGGGCCCGACGGATGACGGTGGAGTGGTGGACCTTAGTCTGGA
TAGCCCGTCGCCTCCTGTACCGCCGCGCTCTCGGCCGCGAATCGCCGTTT
CACCGCCGCCGCAACGGCAACCGAACAACTCGAACGGCGCGGGAGTGAGT
AGAGAGACCGAGGAGGATAGAGTTGTGTTGGAAGCTGGTTCGTCGGACGA
CGACTTCGCCATG
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Coding sequence (CDS) from alignment at P-lacustris_contig100:108890..118602-

>mRNA_P-lacustris_contig100.104.1 ID=mRNA_P-lacustris_contig100.104.1|Name=mRNA_P-lacustris_contig100.104.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3438bp|location=Sequence derived from alignment at P-lacustris_contig100:108890..118602- (Pleurocladia lacustris SAG_25_93)
ATGGGAGGCGGCGTGGGTAAGCGAAAGGGAGCCGCTGGAAAGAAAAAAAG
GAAGTCCAGCAAGGTGTGCAAACCTATGGGAGGCGGCGTGGGTAAGCGAA
AGGGAGCCGCTGGAAAGAAAAAAAGGAAGTCCAGCAAGGTGTGCAAACCT
GTGGTACTGGACGAGGTCGACCTATCGGTATCCCCCGGGAGCGACTCCAA
AGCATCAGGGCCGGCGGGTAGTTCTCACAACCCTGCTCCCTCTCCTTCGA
CTGGCGGCAAGATTAAGGCCGGCTGGTATCGTCGACTTCTGGGAGAGGCC
TTGCTCAAGGTAGAGCTGGATCGGGTGGAACGGTCGAAAGGGCTGGAAGT
TGCCAACGCGCTCTCGGCGCCGTGGCGAAAAGAGTTCGTCAAAAATGCCA
AGACCGTGGTACTGGACGAGGTCGACCTATCGGTATCCCCCGGGAGCGAC
TCCAAAGCATCAGGGCCGGCGGGTAGTTCTCACAACCCTGCTCCCTCTCC
TTCGACTGGCGGCAAGATTAAGGCCGGCTGGTATCGTCGACTTCTGGGAG
AGGCCTTGCTCAAGGTAGAGCTGGATCGGGTGGAACGGTCGAAAGGGCTG
GAAGTTGCCAACGCGCTCTCGGCGCCGTGGCGAAAAGAGTTCGTCAAAAA
TGCCAAGACCATATATGCGCTCACGCCGAGCGGTCATTGGATGGCGGCGA
AGCTGGAGCGGGCGATAGCCGAGGGATCGAGACACGGAGCATCCGCCAAC
TCAACTGCCACCGCCAGCCCTATCCTCAACCGCAGCTCGTACGCGAGCTT
CTCGGAGACGGACGGCGGGGGCGGAGGCGGGACCGCCGCATCCCCGCACA
ACGGGCACTCTCCGCTGGCGCCGACGAGGGCCGGCGGAGGCGCCAAGCCC
GGTGTCAGGCTGCTGATTGATAATCGGGAGAAAAGGGGGGCCACGAAAAA
CAGCCAGATATATGCGCTCACGCCGAGCGGTCATTGGATGGCGGCGAAGC
TGGAGCGGGCGATAGCCGAGGGATCGAGACACGGAGCATCCGCCAACTCA
ACTGCCACCGCCAGCCCTATCCTCAACCGCAGCTCGTACGCGAGCTTCTC
GGAGACGGACGGCGGGGGCGGAGGCGGGACCGCCGCATCCCCGCACAACG
GGCACTCTCCGCTGGCGCCGACGAGGGCCGGCGGAGGCGCCAAGCCCGGT
GTCAGGCTGCTGATTGATAATCGGGAGAAAAGGGGGGCCACGAAAAACAG
CCAGATTTCCCACATGACAAGCTTCCTGAACAGCCGCGGCGTGCCGTACG
AGGTGCGGGAATGGAAGATGGGGGACTACGGATGGATCGTGCAGCCGGAC
GCAGGGAAACCTCCCTCAGCAGGGGAGATTTCCCACATGACAAGCTTCCT
GAACAGCCGCGGCGTGCCGTACGAGGTGCGGGAATGGAAGATGGGGGACT
ACGGATGGATCGTGCAGCCGGACGCAGGGAAACCTCCCTCAGCAGGGGAG
GTAGGGTACGAGAGGGAGTTCGTGGTGCCGCGGCTCCTGGAGAGGAAGCG
CGTCGATGACCTCGCCGAGTCCATCAAGGACGGGTAGGGTACGAGAGGGA
GTTCGTGGTGCCGCGGCTCCTGGAGAGGAAGCGCGTCGATGACCTCGCCG
AGTCCATCAAGGACGGGCGCCTAGGCCGCCAGAAAAATGCCATGCTGCGA
GCCAAGAACGAAGGGGTTGTGTCGGAGGTAGAACTGCACTTGGAGGGGGA
CACGGAAGATTCGCGGTACTCGGACGAGATTTATCGCCGAGGATTAACTC
CCCAGGATCTTGACAAGGCACTACATCAGTCGGAAGCACAGGGCTTCAAG
GCGCCTAGGCCGCCAGAAAAATGCCATGCTGCGAGCCAAGAACGAAGGGG
TTGTGTCGGAGGTAGAACTGCACTTGGAGGGGGACACGGAAGATTCGCGG
TACTCGGACGAGATTTATCGCCGAGGATTAACTCCCCAGGATCTTGACAA
GGCACTACATCAGTCGGAAGCACAGGGCTTCAAGATCGTGCGCCACCGCA
ACTTCTGCGATTTCAGCGTCTACCTCGCGGATGCCACCCAAGCCCTCCAG
AAAGTGTTCGACGCCAAGTCCCTCGACTTCGAATCCTTCGTTACTTGGCA
AAACTTCATCCGCTTCTCCAAGGGCCAGATCCCTCTGACGCCCAAGGGAG
CGGCTGCCGCCGCCGCCGCTGAAAAAGCTGCCGCCATCGCCAAAGCCGCG
CGCGGGGGAAAGCGAGGTCGGCCGCCGATATCGGCGGTGGGTGGTGGAGG
GCGGGGTAGACCTCCCCCCTCTACTGCTGCCGCTTCTGAGGTGGGGGCGG
GCTTACGCCAGCGTACTCTTGATGGCGTTTTCGGGATCGCGGGAAGATCG
AGAGGTGCTGATCGTGCGCCACCGCAACTTCTGCGATTTCAGCGTCTACC
TCGCGGATGCCACCCAAGCCCTCCAGAAAGTGTTCGACGCCAAGTCCCTC
GACTTCGAATCCTTCGTTACTTGGCAAAACTTCATCCGCTTCTCCAAGGG
CCAGATCCCTCTGACGCCCAAGGGAGCGGCTGCCGCCGCCGCCGCTGAAA
AAGCTGCCGCCATCGCCAAAGCCGCGCGCGGGGGAAAGCGAGGTCGGCCG
CCGATATCGGCGGTGGGTGGTGGAGGGCGGGGTAGACCTCCCCCCTCTAC
TGCTGCCGCTTCTGAGGTGGGGGCGGGCTTACGCCAGCGTACTCTTGATG
GCGTTTTCGGGATCGCGGGAAGATCGAGAGGTGCTGAGGACGGCGGAGGT
GACAGCGGTGGGGGCTCGTTCTCGAAACCGACGGTGTCGTGGAGAGAAAA
TGCAATTGCTGTGGATGCTGATGGCGTCCTGCCTCCTGACTCTGGCGCAG
GCTGTGATTCCTCTTCCGATGACTGCAGCATCGTAGAAGTTGTTCGTCGA
GGTGCTAGTGGTGGTCCAGGTTCCGGTTCTGCTACCGCTGCTCCCACCTT
GCGTGACGGTGGTGCTGGCGCGGGCGGCAGGAAAGAGGAAGGCGCCGGCA
GAGGCGGGGACCTCGCCATTCACCATCGCTGCAGCTGGAGGCTACTCCCC
CGCTGCTGCTAGAGGACGGCGGAGGTGACAGCGGTGGGGGCTCGTTCTCG
AAACCGACGGTGTCGTGGAGAGAAAATGCAATTGCTGTGGATGCTGATGG
CGTCCTGCCTCCTGACTCTGGCGCAGGCTGTGATTCCTCTTCCGATGACT
GCAGCATCGTAGAAGTTGTTCGTCGAGGTGCTAGTGGTGGTCCAGGTTCC
GGTTCTGCTACCGCTGCTCCCACCTTGCGTGACGGTGGTGCTGGCGCGGG
CGGCAGGAAAGAGGAAGGCGCCGGCAGAGGCGGGGACCTCGCCATTCACC
ATCGCTGCAGCTGGAGGCTACTCCCCCGCTGCTGCTAG
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