mRNA_P-lacustris_contig100.101.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig100.101.1
Unique NamemRNA_P-lacustris_contig100.101.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: D7FVI2_ECTSI (Peroxin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI2_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 5.080e-109
Identity = 190/254 (74.80%), Postives = 206/254 (81.10%), Query Frame = 2 
Query:   74 MVRAMVRLVKTKNCFVNLPAHVARGLAGASEGAVILRLSWDAS----PSTTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGA-AAACVRLTADTEVAVSPKPRRRTRLREGGERQQRFRSSGLLRVAPPPPGWQADGAAARGDC--SGCARPYLLVHPLLSQESTG 814
            MVRA VRLVKTKNCFVN+PAHVARGL GASEGAVILRLSWD +     +TT+PSW F SWNGG+SDAQSGAIEVPLALA+V GLAAALD+D+YLSV  EPAGYVPTASRVCLEPLS DDWEILEANAEHLEG ML QVCVAYTGQ+MPIWVHNTSLI+L+VVS ETP GA AA CVRLTADTEVAVSPK         G  R+QRFRSSGLLRVAPPPPGW+ +  A   +   SGC RPY+L HP    E  G
Sbjct:    1 MVRATVRLVKTKNCFVNIPAHVARGLDGASEGAVILRLSWDGAVAEAAATTTPSWAFASWNGGISDAQSGAIEVPLALAQVLGLAAALDADSYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVCVAYTGQVMPIWVHNTSLISLQVVSVETPGGAPAAGCVRLTADTEVAVSPKXXXXXXXXXGEPRRQRFRSSGLLRVAPPPPGWKLEETALARNSGGSGCGRPYVLAHPATLTEIDG 254
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A6H5L6R6_9PHAE (Peroxin-1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R6_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 3.430e-73
Identity = 140/189 (74.07%), Postives = 149/189 (78.84%), Query Frame = 2 
Query:  257 DAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGA-AAACVRLTADTEVAVSPKPRRRTRLREGGERQQRFRSSGLLRVAPPPPGWQADGAAAR--GDCSGCARPYLLVHPLLSQESTG 814
            D+ SGAIEVPLALA+V GLAAALDSDAYLSV  EPAGYVPTASRVCLEPLS DDWEILEANAEHLEG ML QVCVAYTGQ+MPIWVHNT LI+L+VVS E P GA AA CVRLTADTEVAVSPK        EG  RQ+RFRSSGLLRVA PPPGW+ +G A    G  SGC RPY+L HP    E  G
Sbjct:    6 DSSSGAIEVPLALAQVMGLAAALDSDAYLSVAAEPAGYVPTASRVCLEPLSCDDWEILEANAEHLEGHMLTQVCVAYTGQVMPIWVHNTLLISLQVVSVEIPGGAPAAGCVRLTADTEVAVSPKXXXXXXXXEGEPRQERFRSSGLLRVASPPPGWKLEGTALGRIGGGSGCGRPYVLAHPATLTEIDG 194
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A7S2SM78_9STRA (Peroxin-1 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SM78_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.000e-22
Identity = 72/196 (36.73%), Postives = 106/196 (54.08%), Query Frame = 2 
Query:   89 VRLVKTKNCFVNLPAHVARGLAGA----SEGAVILRLSWDASPSTTS-----PSWTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALD------SDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 631
            V +V   N FV +P+   + +  +    S G V LR+ W   P+ +S     PS +F  W   ++D     ++VP+ALA   GL  A+D       D+ L V V    Y P ASRV ++P+++DDWEIL+ +A  +E ++L Q+CV   GQ  P+W+H  + I L+V S        A CVRL  +TEV V+PK R
Sbjct:   14 VVVVNGTNNFVGIPSRFCQNIRASFPQKSHGVVALRIGWLGPPNNSSGGLARPSQSFVGWTSQVADGHF--LQVPVALAESIGLKDAVDFATKTAPDSPLVVSVAVIPYAPVASRVDVDPVTADDWEILQLHANFVESELLSQICVLGPGQQFPMWIHGRTRINLQVSSIALVEKGQALCVRLARNTEVVVAPKLR 207
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: D3B6L3_POLPP (Peroxin-1 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B6L3_POLPP)

HSP 1 Score: 103 bits (256), Expect = 5.410e-20
Identity = 74/182 (40.66%), Postives = 102/182 (56.04%), Query Frame = 2 
Query:  110 NCFVNLPAHVARGLAGASE------GAVILRLSWDASPSTTSPSWTFTSWNGGLSDAQSG--AIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 631
            NCFV LP  +   L   +E       ++ L LSW    ST         W+GG SD  SG  AIE+   L    G+A        ++V+ +  G VP A+ V +EPL+SDDWEILE + E+LE Q+L QV V   GQI+PIW+H++++I L++V       A +  VRLT   E+AV+PKPR
Sbjct:   12 NCFVCLPPKIVHSLFLLAEKNAISVNSLTLELSW-YDKSTKKERKINVGWSGGASDPSSGPDAIEMNAELGDAIGIA----DHTRVTVKAQ-IGSVPQATSVQVEPLTSDDWEILELHQEYLEQQILNQVNVMTRGQIVPIWIHHSTIIKLKIVDT-----APSEIVRLTNQVEIAVAPKPR 182
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: F4PSY5_CAVFA (Peroxin-1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PSY5_CAVFA)

HSP 1 Score: 99.8 bits (247), Expect = 7.490e-19
Identity = 69/196 (35.20%), Postives = 106/196 (54.08%), Query Frame = 2 
Query:   89 VRLVKTKNCFVNLPAHVARGLAGASEGA-VILRLSWDASPSTTSPSWTFTSWNGGLSDAQ--------SGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAA------ACVRLTADTEVAVSPKPR 631
            V L  + NCFVNLP  +A  LA  +E   +IL L W    +     + F  W+GG             + ++E+   +A+  GL         + ++   A  V  A+ V +EP++SDDWEILE +AE+LE Q+L Q+ V  +GQI+PIW+H   +I LRV+   TP  ++       + V+L+ D+E+ V+PKPR
Sbjct:    5 VTLRHSPNCFVNLPLKIAHTLAQRNESTQLILELKW-YDKANKEDKYAFVGWSGGXXXXXXXXXXXXXNDSLEMSQEMAQCLGLV----EGQMIRLKAASASAVQKATTVEVEPVTSDDWEILEVHAEYLEEQLLNQINVVSSGQIIPIWIHQKIVIHLRVIDV-TPKSSSXXXXNQPSAVKLSNDSEIIVAPKPR 194
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A8J4PXJ1_9MYCE (Peroxin-1 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PXJ1_9MYCE)

HSP 1 Score: 98.6 bits (244), Expect = 1.820e-18
Identity = 62/180 (34.44%), Postives = 100/180 (55.56%), Query Frame = 2 
Query:  110 NCFVNLPAHVARGLAGASE------GAVILRLSWDASPSTTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 631
            +CFV+LP  + + L   SE      G++ L L W    +       +  W G  S   SG     + ++   G A  L S   + V+V  +  + +A+ + +EPL+SDDWEILE N+ +LE Q+L QV + + GQI+PIW+H+ ++I LRV+  +      A  V+L+ ++E+ V+PKPR
Sbjct:   12 DCFVSLPPQIIQSLLAHSEKNSRSLGSLSLELGWYDKENKQDKK-VYVGWAGSASSVTSGGNSRCIEMSPQMGAALNLKSGQVVKVKVNTS--ISSATSIQVEPLTSDDWEILEVNSSYLEEQLLNQVNILFVGQIVPIWIHHKTMIQLRVLETQP-----ADVVKLSPNSEIIVAPKPR 183
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A3M6T6L0_POCDA (Peroxin-1 n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6T6L0_POCDA)

HSP 1 Score: 98.6 bits (244), Expect = 1.870e-18
Identity = 67/186 (36.02%), Postives = 101/186 (54.30%), Query Frame = 2 
Query:   83 AMVRLVKTKNCFVNLPAHVARGLAGASEGAVI-LRLSWDASPSTTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAG--LAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 631
            A VR   +KNCFV+L   +A  +    +G    L+L W+   +       F SW+G ++  + G I    +     G   A  L  D    V VEP   +P+ +R+ ++P+S++DWEILE +A ++E Q+L QV V + GQI+PIW+ N   + +++V+ E      A CVRL   TEV VSPK R
Sbjct:    7 ACVRTNSSKNCFVSLSGDLAEAIGLRIQGQPFALQLQWENGKA-------FASWSGEVTRGKRGVILNDSSSIVQLGKKFADGLGLDDNQQVLVEPVVGIPSCNRINVDPVSANDWEILELHAGYIESQLLNQVRVVFPGQILPIWIENNMCVVVQIVNLEPD----ANCVRLDEFTEVIVSPKTR 181
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A5J4YGC6_9CHLO (Peroxin-1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGC6_9CHLO)

HSP 1 Score: 97.4 bits (241), Expect = 4.160e-18
Identity = 68/180 (37.78%), Postives = 99/180 (55.00%), Query Frame = 2 
Query:  107 KNCFVNLP-AHVARGLAGASEGAVILRLSWDASP---STTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPRR 634
            K+C+V LP A V++  + ++    +L L   A+    ST +P     SW G  S  Q   +E+P ALA   G+A  +      +V V+    +P A  VC+EPLS DDWE++E NA H+E Q+L QV V   GQ  P W    + + L+V +A       A+ V+L  D+EVAV+P+PRR
Sbjct:   27 KSCWVALPPALVSKLYSESASLRAVLELKRSATGRDRSTNAPESWHVSWGGAASKGQH--LEIPAALAGCLGIAQGI------TVSVQVVTDIPEAIGVCVEPLSVDDWEVVEQNAGHMEEQILSQVGVVQAGQAFPFWARQQTKLLLKVTTAHP-----ASLVQLARDSEVAVAPRPRR 193
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: F2E3I9_HORVV (Peroxin-1 n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2E3I9_HORVV)

HSP 1 Score: 96.7 bits (239), Expect = 7.630e-18
Identity = 68/178 (38.20%), Postives = 99/178 (55.62%), Query Frame = 2 
Query:  110 NCFVNLPAHVARGL---AGASEGAVILRLSWDASPSTTSPSWTFTSWNGGLSDAQSG-AIEVPLALARVAGLAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 631
            +C+VNLPAH    +     A+  A+IL +S       +  +  F  W GG   A++G  IE     A   G          +SVR   A  VP A+RV +EPLSSDDWEILEA++E+LE Q+L QVCV + G++ P+W+ + ++  +++V       A A  VRL  D+E  ++PKPR
Sbjct:   12 SCYVNLPAHAVGQIFDQQDANYSALILEVSGINEDGRSVRA--FVGWTGGF--AKNGKTIEFSGPFALTLGFR----ERQKVSVRSSAAKDVPLATRVHVEPLSSDDWEILEAHSEYLEEQILNQVCVVFEGEVFPLWIRHQTMAKIKIVQT-----APAKLVRLANDSEFVIAPKPR 176
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BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Match: A0A2B4RQK6_STYPI (Peroxin-1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQK6_STYPI)

HSP 1 Score: 95.5 bits (236), Expect = 1.940e-17
Identity = 67/186 (36.02%), Postives = 103/186 (55.38%), Query Frame = 2 
Query:   83 AMVRLVKTKNCFVNLPAHVARGLAGASEGAVI-LRLSWDASPSTTSPSWTFTSWNGGLSDAQSGAIEVPLALARVAG--LAAALDSDAYLSVRVEPAGYVPTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNTSLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPR 631
            A VR   +KNCFV+L   +A  +    +G    L+L W+   +       FTSW+G +  ++ G I    +     G   A AL  D    V VEP   + + +R+ ++P+S++DWEILE +A ++E Q+L QV V + GQ++PIW+ N   + +++V  E P+   A CVRL   TEV V+PK R
Sbjct:    7 ASVRTNSSKNCFVSLSGDLAEAVGLRIQGQPFALQLEWENGKA-------FTSWSGEVIHSRRGDILNDSSSIVQLGKKFADALGLDDEQQVLVEPVVGIASCNRISVDPVSANDWEILELHAGYIESQLLNQVRVVFPGQLLPIWIENNMCVVVQIVDLE-PN---ANCVRLDEFTEVIVTPKTR 181
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVI2_ECTSI5.080e-10974.80Peroxin-1 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5L6R6_9PHAE3.430e-7374.07Peroxin-1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxI... [more]
A0A7S2SM78_9STRA2.000e-2236.73Peroxin-1 n=1 Tax=labyrinthulid quahog parasite QP... [more]
D3B6L3_POLPP5.410e-2040.66Peroxin-1 n=1 Tax=Polysphondylium pallidum (strain... [more]
F4PSY5_CAVFA7.490e-1935.20Peroxin-1 n=1 Tax=Cavenderia fasciculata (strain S... [more]
A0A8J4PXJ1_9MYCE1.820e-1834.44Peroxin-1 n=1 Tax=Polysphondylium violaceum TaxID=... [more]
A0A3M6T6L0_POCDA1.870e-1836.02Peroxin-1 n=2 Tax=Pocillopora damicornis TaxID=467... [more]
A0A5J4YGC6_9CHLO4.160e-1837.78Peroxin-1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996... [more]
F2E3I9_HORVV7.630e-1838.20Peroxin-1 n=1 Tax=Hordeum vulgare subsp. vulgare T... [more]
A0A2B4RQK6_STYPI1.940e-1736.02Peroxin-1 n=2 Tax=Stylophora pistillata TaxID=5042... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:45755..49041 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.0
Seed ortholog evalue2.2e-96
Seed eggNOG ortholog2880.D7FVI2
Preferred namePEX1
KEGG koko:K05093,ko:K13338,ko:K13525
KEGG TC3.A.16.1,3.A.20.1
KEGG Pathwayko01521,ko04010,ko04014,ko04015,ko04141,ko04144,ko04146,ko04151,ko04550,ko04810,ko05134,ko05200,ko05215,ko05226,ko05230,map01521,map04010,map04014,map04015,map04141,map04144,map04146,map04151,map04550,map04810,map05134,map05200,map05215,map05226,map05230
KEGG ModuleM00400,M00403
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0000166,GO:0001881,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005829,GO:0006605,GO:0006625,GO:0006810,GO:0006886,GO:0006996,GO:0007017,GO:0007031,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007417,GO:0007422,GO:0008022,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0010001,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016043,GO:0016462,GO:0016558,GO:0016562,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017076,GO:0017111,GO:0019953,GO:0021782,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0030154,GO:0030554,GO:0031090,GO:0031903,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0042063,GO:0042579,GO:0042623,GO:0042886,GO:0043112,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043574,GO:0044237,GO:0044260,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0044877,GO:0045184,GO:0046907,GO:0046982,GO:0046983,GO:0048137,GO:0048232,GO:0048468,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0051179,GO:0051234,GO:0051301,GO:0051640,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0060151,GO:0060152,GO:0065002,GO:0065007,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:0097159,GO:0097367,GO:0098588,GO:0098805,GO:1901265,GO:1901363
EggNOG free text desc.establishment of protein localization to peroxisome
EggNOG OGsCOG0464@1,COG0554@1,KOG0728@2759,KOG0735@2759
EC2.7.10.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko01000,ko01001,ko01020,ko03019,ko04050,ko04090,ko04131,ko04147
Exons6
Model size1197
Cds size933
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.101.1prot_P-lacustris_contig100.101.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig100 45946..48968 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815264.763864-UTR-P-lacustris_contig100:45754..459451622815264.763864-UTR-P-lacustris_contig100:45754..45945Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 45755..45945 -
1693493438.0480437-UTR-P-lacustris_contig100:45754..459451693493438.0480437-UTR-P-lacustris_contig100:45754..45945Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 45755..45945 -
1622815265.4511762-UTR-P-lacustris_contig100:48968..490411622815265.4511762-UTR-P-lacustris_contig100:48968..49041Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 48969..49041 -
1693493438.1234283-UTR-P-lacustris_contig100:48968..490411693493438.1234283-UTR-P-lacustris_contig100:48968..49041Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig100 48969..49041 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815264.7743413-CDS-P-lacustris_contig100:45945..461271622815264.7743413-CDS-P-lacustris_contig100:45945..46127Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 45946..46127 -
1693493438.0650055-CDS-P-lacustris_contig100:45945..461271693493438.0650055-CDS-P-lacustris_contig100:45945..46127Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 45946..46127 -
1622815264.7850425-CDS-P-lacustris_contig100:46400..465621622815264.7850425-CDS-P-lacustris_contig100:46400..46562Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 46401..46562 -
1693493438.074632-CDS-P-lacustris_contig100:46400..465621693493438.074632-CDS-P-lacustris_contig100:46400..46562Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 46401..46562 -
1622815264.8014212-CDS-P-lacustris_contig100:47173..473631622815264.8014212-CDS-P-lacustris_contig100:47173..47363Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 47174..47363 -
1693493438.0839102-CDS-P-lacustris_contig100:47173..473631693493438.0839102-CDS-P-lacustris_contig100:47173..47363Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 47174..47363 -
1622815264.816066-CDS-P-lacustris_contig100:47688..478931622815264.816066-CDS-P-lacustris_contig100:47688..47893Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 47689..47893 -
1693493438.0930212-CDS-P-lacustris_contig100:47688..478931693493438.0930212-CDS-P-lacustris_contig100:47688..47893Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 47689..47893 -
1622815264.8270042-CDS-P-lacustris_contig100:48162..482631622815264.8270042-CDS-P-lacustris_contig100:48162..48263Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 48163..48263 -
1693493438.1018755-CDS-P-lacustris_contig100:48162..482631693493438.1018755-CDS-P-lacustris_contig100:48162..48263Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 48163..48263 -
1622815264.8385744-CDS-P-lacustris_contig100:48875..489681622815264.8385744-CDS-P-lacustris_contig100:48875..48968Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 48876..48968 -
1693493438.1120217-CDS-P-lacustris_contig100:48875..489681693493438.1120217-CDS-P-lacustris_contig100:48875..48968Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig100 48876..48968 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig100.101.1

>prot_P-lacustris_contig100.101.1 ID=prot_P-lacustris_contig100.101.1|Name=mRNA_P-lacustris_contig100.101.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=311bp
MVRAMVRLVKTKNCFVNLPAHVARGLAGASEGAVILRLSWDASPSTTSPS
WTFTSWNGGLSDAQSGAIEVPLALARVAGLAAALDSDAYLSVRVEPAGYV
PTASRVCLEPLSSDDWEILEANAEHLEGQMLVQVCVAYTGQIMPIWVHNT
SLIALRVVSAETPHGAAAACVRLTADTEVAVSPKPRRRTRLREGGERQQR
FRSSGLLRVAPPPPGWQADGAAARGDCSGCARPYLLVHPLLSQESTGGIA
VKFEGPVALRHPRRWWPCCIPVDFTPAQRGASSSVAGRVVVQARERKGNR
HPPGRRGTTR*
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mRNA from alignment at P-lacustris_contig100:45755..49041-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig100.101.1 ID=mRNA_P-lacustris_contig100.101.1|Name=mRNA_P-lacustris_contig100.101.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3287bp|location=Sequence derived from alignment at P-lacustris_contig100:45755..49041- (Pleurocladia lacustris SAG_25_93)
GGAGCTCCCAATCACTGCAATCGTGGAAGAGCACGCACACAAGTGCAGCG
TCTGCCGACCGGCGCTGCCCACGATGGTGCGTGCGATGGTGCGGTTGGTG
AAAACCAAGAACTGCTTCGTCAATCTTCCCGCTCATGTGGCCAGGGGCCT
GGCGGGCGCATCGGAGGTGAGTTTCTTGAACTCAACTCCACCGGCTCTCA
GTCCAACTTTGCTCTCTCTCTCGGAATCACCACCACAGCGGTCGAAGCAG
TTGTGTCGTGTTATCTTGGCGACAAGTTAAGCAGAAGTATCAATCCTCCC
TCCCCCCTGTGCGTCAATGCACAGGTGTAGGACAACTCTTTCACTTCAAA
GAAGTAGTTGTACCTGCTGGCGTAGGTGTTACAACTACCAAGGAAAGAGC
TGACAACATGACCAGCCCATATGTCGTCGGGGACCAGCAGGGATGATCGC
AACCTTAGCTACGAATGCTGTTGGTCAGCTGCAACAGTTCGTATACTACT
GTGCAGGTCGGGCCCATTCGTCGCGGGCGAGCTCTCTTGCTAAGTACAGA
GTTGCCGTCTGCTTAACGTTTTTCCCTAAATACGCGGCCCTGCAATCCGC
GGCATTGTCGGCTTCCGCCATTCAGCATTGGGCAGCTTACACCGGAGCGT
TGAGGCGTTCGCACCGAGCAATGAGAGCTGTGTTACACACGACGGCTGCT
GTGTTACCTTACGTTTGTTGTTCAACGTTGGCCACTCTACTCGCGTCGAA
AAACAATTCCGCAAAATTTAAACTACAGGGCGCGGTTATCCTGCGGCTGT
CTTGGGACGCATCGCCATCTACAACATCGCCATCGTGGACGTTCACTTCT
TGGAATGGAGGTCTCAGCGACGCGCAAAGGTTTGGCCGCCGCTTTTGGAG
CGCACTTGACTCGAACAAAAAAGAAGCACCCAGAGGGCGAAATATCGCTG
CAGCCGTTGTAGCCGTTGTAGCCATTTGAAACATGTGTACGCGTTCGGTA
TCCGTCTGGTCTCTTACGGACAGCTTGGCGGCGCATGTTGGGAGCGCAGT
CTCCTTCTCTGCACAAGTCACAACTATCCCCAGTCTTTACACAGCCCTTC
CGTTGTTCGGACGAAAAATGAGGTCGTCGTTTCGCTCGACTGTCGCAGCG
GCGCGATCGAGGTTCCACTGGCGCTGGCGCGAGTAGCTGGGCTGGCCGCG
GCGCTCGACTCAGATGCATACCTGTCGGTCCGGGTAGAGCCGGCGGGGTA
CGTACCTACCGCGTCGCGCGTGTGCCTGGAGCCGCTCTCTAGCGACGACT
GGGAGATTCTGGAGGCCAACGCGGAGCATTTAGAGGGGCAGATGCTAGTG
CAGGTGGGTGGTGACGTGGGTGCTACGTGTCCGTTTCCTTCAGGACCCAA
TAAATCCCGCCCAAGACGGAGCCCCGTTATTCTCGGTCGTCCACTCGCTC
ACGGCGTGCTCGGGTAGGGACTTGGAGTTGGAGGAGGGGGGGTTGAACTT
TTTCGGTTTTTCTTTGATCAACTTATTTTGCGCGAAGGTGTCCTGGGCCG
GACGTGTGTGTGCCAGCTCAGGCAGACATGCAGAAAAAACAAAAAACTAA
TCAGGAACGTGTTCATTCCCCCTCCGCGAAGCCCTGGCTCATTTTGAACG
TACTCTCGCCGCGTGCTTGCAAAACCAGGTGTGCGTGGCCTACACGGGCC
AAATCATGCCTATCTGGGTCCACAACACGTCGCTCATCGCTCTCCGAGTC
GTGTCCGCCGAGACTCCCCACGGTGCGGCCGCTGCCTGCGTTAGGCTTAC
GGCCGACACGGAGGTGGCTGTCTCTCCAAAACCTCGACGCCGAACGCGTT
TGCGAGAAGGAGGAGAAAGTGAGCCCTCCCCCCGTTCTACCATATGCAAT
ATGCCGCTTGCCCAACGTCTCGCTGCTCTCATGGCGCTTGGGCGCGGCGC
TCTAATGGTTGGCATGCAACCATGCCGCCGGCGTATGGTGCATTGGTGTC
ATGTGGAAGATAGAGGGTGGGACCTGCTGTCTAGTTTGAAGTCAACAATA
GTAAGGGATGGTCGGGAATATGTACAGCTTTCTGTTTGCCGGGCTGCCAG
CCGAACGTAGGCGCCAGGCCGCCTTGGCACATCTGGGTGATTTGTTCGCC
TGGGACAACCGTTCGATTTATTTCCCTCGTACCTCGTGTTTATTCAGCTT
GTTGCGTGCCTAGATCCGTAGCCGGTGTGGTCCCGGCATTAGCCAGAGTG
AAAGGACTGCCCCCGGGTCCGCCCCCCCCGCCCGCCCATGCTTAACGCGG
GCCGCGTGATTCGCTTTATCCCTGCCAACGCCCCCGTGCCTATGACGCTT
TCGGCAAGGGGGAAGCTCGAGGCTTTCGGAGACACCTTGCCATTATGCCG
GGCGACGTATTCTTGGAATTGTGTCCCCATCTCTGCTTGTATGCCTGCCT
GCTTTTGTGCCGGACGCATGAAACACCAGGACAACAGCGATTTCGCTCGA
GTGGGCTCCTGAGGGTAGCCCCTCCGCCCCCCGGATGGCAAGCCGATGGA
GCGGCCGCGCGTGGCGATTGCAGCGGCTGCGCCCGCCCGTACCTGCTCGT
GCACCCGCTACTCTCGCAGGAGTCGACGGGTGGAATAGCAGGTAACCCTA
TACCTGGTTGTTGCGAATACTCAGCAGACAAAATGGAACCCTTTCCTGGG
TTTCTCTCACATGACTTCTGACGAGCAGTACACAAAACAGCCCACACGCT
TCGCTTGACCCCTGGCACTTGTTATTGCCTTTAAAAGATGGGTCTGTCTT
TCTATCGCGCGTCCCCGCACCCACGCACCCGTTATTTCCCGCCCAACGAA
ACTTTCCGAAACCAACTCAACGGCGTGACCTCGCGCGCCGCCCTCATCCC
ACCCGCTTACGAAGTCAAGTTCGAGGGCCCCGTGGCCCTCCGTCATCCTC
GGCGATGGTGGCCCTGCTGCATCCCCGTCGACTTCACCCCCGCCCAACGA
GGCGCTAGCAGTTCTGTGGCGGGACGGGTCGTCGTGCAGGCGAGGGAGCG
GAAAGGGAACCGGCATCCGCCAGGAAGGAGAGGGACAACAAGGTAACGGC
GGCGGCGGCGGCGGTGATGGTGGCTGGTTGGCTACGGCGGTGGAGGCGGG
CCGCGGAAACGCCGGCCGCGGAAAAAGCAACGCGGAATTACCACGGGAAA
GAAAAGGAGGGCACGAGAGAGGGATCGTCGTGATCCTGAGGGAGGATGCT
AGGATTCCTCCGAGTCACGTGGCAGAGGCGGCGGGGG
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Coding sequence (CDS) from alignment at P-lacustris_contig100:45755..49041-

>mRNA_P-lacustris_contig100.101.1 ID=mRNA_P-lacustris_contig100.101.1|Name=mRNA_P-lacustris_contig100.101.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1866bp|location=Sequence derived from alignment at P-lacustris_contig100:45755..49041- (Pleurocladia lacustris SAG_25_93)
ATGGTGCGTGCGATGGTGCGGTTGGTGAAAACCAAGAACTGCTTCGTCAA
TCTTCCCGCTCATGTGGCCAGGGGCCTGGCGGGCGCATCGGAGATGGTGC
GTGCGATGGTGCGGTTGGTGAAAACCAAGAACTGCTTCGTCAATCTTCCC
GCTCATGTGGCCAGGGGCCTGGCGGGCGCATCGGAGGGCGCGGTTATCCT
GCGGCTGTCTTGGGACGCATCGCCATCTACAACATCGCCATCGTGGACGT
TCACTTCTTGGAATGGAGGTCTCAGCGACGCGCAAAGGGCGCGGTTATCC
TGCGGCTGTCTTGGGACGCATCGCCATCTACAACATCGCCATCGTGGACG
TTCACTTCTTGGAATGGAGGTCTCAGCGACGCGCAAAGCGGCGCGATCGA
GGTTCCACTGGCGCTGGCGCGAGTAGCTGGGCTGGCCGCGGCGCTCGACT
CAGATGCATACCTGTCGGTCCGGGTAGAGCCGGCGGGGTACGTACCTACC
GCGTCGCGCGTGTGCCTGGAGCCGCTCTCTAGCGACGACTGGGAGATTCT
GGAGGCCAACGCGGAGCATTTAGAGGGGCAGATGCTAGTGCAGCGGCGCG
ATCGAGGTTCCACTGGCGCTGGCGCGAGTAGCTGGGCTGGCCGCGGCGCT
CGACTCAGATGCATACCTGTCGGTCCGGGTAGAGCCGGCGGGGTACGTAC
CTACCGCGTCGCGCGTGTGCCTGGAGCCGCTCTCTAGCGACGACTGGGAG
ATTCTGGAGGCCAACGCGGAGCATTTAGAGGGGCAGATGCTAGTGCAGGT
GTGCGTGGCCTACACGGGCCAAATCATGCCTATCTGGGTCCACAACACGT
CGCTCATCGCTCTCCGAGTCGTGTCCGCCGAGACTCCCCACGGTGCGGCC
GCTGCCTGCGTTAGGCTTACGGCCGACACGGAGGTGGCTGTCTCTCCAAA
ACCTCGACGCCGAACGCGTTTGCGAGAAGGAGGAGAAAGTGTGCGTGGCC
TACACGGGCCAAATCATGCCTATCTGGGTCCACAACACGTCGCTCATCGC
TCTCCGAGTCGTGTCCGCCGAGACTCCCCACGGTGCGGCCGCTGCCTGCG
TTAGGCTTACGGCCGACACGGAGGTGGCTGTCTCTCCAAAACCTCGACGC
CGAACGCGTTTGCGAGAAGGAGGAGAAAGACAACAGCGATTTCGCTCGAG
TGGGCTCCTGAGGGTAGCCCCTCCGCCCCCCGGATGGCAAGCCGATGGAG
CGGCCGCGCGTGGCGATTGCAGCGGCTGCGCCCGCCCGTACCTGCTCGTG
CACCCGCTACTCTCGCAGGAGTCGACGGGTGGAATAGCAGGACAACAGCG
ATTTCGCTCGAGTGGGCTCCTGAGGGTAGCCCCTCCGCCCCCCGGATGGC
AAGCCGATGGAGCGGCCGCGCGTGGCGATTGCAGCGGCTGCGCCCGCCCG
TACCTGCTCGTGCACCCGCTACTCTCGCAGGAGTCGACGGGTGGAATAGC
AGTCAAGTTCGAGGGCCCCGTGGCCCTCCGTCATCCTCGGCGATGGTGGC
CCTGCTGCATCCCCGTCGACTTCACCCCCGCCCAACGAGGCGCTAGCAGT
TCTGTGGCGGGACGGGTCGTCGTGCAGGCGAGGGAGCGGAAAGGGAACCG
GCATCCGCCAGGAAGGAGAGGGACAACAAGGTAATCAAGTTCGAGGGCCC
CGTGGCCCTCCGTCATCCTCGGCGATGGTGGCCCTGCTGCATCCCCGTCG
ACTTCACCCCCGCCCAACGAGGCGCTAGCAGTTCTGTGGCGGGACGGGTC
GTCGTGCAGGCGAGGGAGCGGAAAGGGAACCGGCATCCGCCAGGAAGGAG
AGGGACAACAAGGTAA
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