prot_P-lacustris_contig108.682.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig108.682.1
Unique Name	prot_P-lacustris_contig108.682.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	156

Homology

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A6H5KUS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS8_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 1.480e-76
Identity = 120/155 (77.42%), Postives = 135/155 (87.10%), Query Frame = 0

Query:    1 MGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 155
            MGKKAKLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV+D KSFKNVGNWMRQI+ NA+PDVNVT+VGNK DV++++R VS EQGQRLAA HG+ VRFFETSARSNVNVTEAFEGLATDVI RL++QDEASL  V  L+L  E+P   +K   CC
Sbjct:   56 MGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDLKSFKNVGNWMRQIELNAAPDVNVTLVGNKSDVAEEERVVSLEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQAQDEASLARVAPLKLGQEEP---TKKSDCC 207

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: D7FME1_ECTSI (Rab8B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME1_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 2.770e-76
Identity = 121/155 (78.06%), Postives = 136/155 (87.74%), Query Frame = 0

Query:    1 MGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 155
            MGKKAKLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV+D KSF+NVGNWMRQI+ NA+PDVNVT+VGNK DV++ +R VSFEQGQRLAA HG+ VRFFETSARSNVNVTEAFEGLATDVI RL++QDEASL  V  L+L  E+  S  K+D CC
Sbjct:    1 MGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDVKSFRNVGNWMRQIELNAAPDVNVTLVGNKSDVAEAERVVSFEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQTQDEASLARVAPLKLGQEE--STEKSD-CC 152

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A1J3ISU9_NOCCA (Ras-related protein RAB1BV (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ISU9_NOCCA)

HSP 1 Score: 174 bits (442), Expect = 2.660e-53
Identity = 90/154 (58.44%), Postives = 116/154 (75.32%), Query Frame = 0

Query:    2 GKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 155
            GK+ KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF+NV NWMRQI+ +ASP+VN  ++GNKCDV   +R V+ EQG+ LAA +G  V+FFETSA+SN+NV EAF  +A DV KRL   D   L      R++ ++ +S   ++GCC
Sbjct:    2 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALAAEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECDSDRLDVANESRIKLDE-QSARPSEGCC 152

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC)

HSP 1 Score: 175 bits (444), Expect = 7.150e-53
Identity = 89/154 (57.79%), Postives = 116/154 (75.32%), Query Frame = 0

Query:    2 GKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 155
            GK+ KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF+NV NWMRQI+ +ASP+VN  ++GNKCDV   +R V+ +QG+ LAA +G  V+FFETSA+SN+NV EAF  +A DV KRL   +   L      +++ +D  +D  +DGCC
Sbjct:   56 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERVVTTQQGEELAAEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRLDVANERKIKLDD-HADRTSDGCC 206

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A485LS68_9STRA (Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LS68_9STRA)

HSP 1 Score: 173 bits (438), Expect = 6.170e-52
Identity = 87/154 (56.49%), Postives = 114/154 (74.03%), Query Frame = 0

Query:    2 GKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 155
            GK+ KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF+NV NWMRQI+ +ASP+VN  ++GNKCDV   +R V+ EQG+ LA  +G  V+FFETSA+SN+NV EAF  +A DV KRL   +          R++ ++  S + ++GCC
Sbjct:   57 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALANEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRSDVANQTRIKLDEQNSRAASEGCC 208

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A484DYW2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYW2_BRELC)

HSP 1 Score: 166 bits (419), Expect = 6.470e-49
Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 0

Query:    2 GKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 155
            GK+ KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF+N+ NWM QI+ NAS +VN  ++GNKCDV   +R V+ +QGQ LA   G  V+FFETSA+SN N+ EAF  +A D+ KRL   +   L      +   ++ +   K DGCC
Sbjct:   68 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDSSERAVTTQQGQDLADEFG--VKFFETSAKSNQNIEEAFRSIAMDIQKRLAESEHDRLDVANGSKFHVDESQDQGK-DGCC 218

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: H3G925_PHYRM (Uncharacterized protein n=19 Tax=Oomycota TaxID=4762 RepID=H3G925_PHYRM)

HSP 1 Score: 165 bits (417), Expect = 9.090e-49
Identity = 83/154 (53.90%), Postives = 109/154 (70.78%), Query Frame = 0

Query:    2 GKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 155
            GK+ KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF+N+ NWM QI+ NAS +VN  ++GNKCDV   +R V+ +QGQ LA   G  ++FFETSA+SN N+ EAF  +A D+ KRL   +   L      + R ++ +  +K D CC
Sbjct:   56 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFG--IKFFETSAKSNKNIDEAFRSIAVDIQKRLAESEHDRLDVANGSKFRVDESQEQAK-DSCC 206

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: W7U3B0_9STRA (Rab8-family small gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3B0_9STRA)

HSP 1 Score: 160 bits (406), Expect = 4.600e-47
Identity = 80/132 (60.61%), Postives = 103/132 (78.03%), Query Frame = 0

Query:    3 KKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQG 134
            KK KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+DE+SF NV NWMRQI+ +AS  VN  ++GNKCDV   DR VS EQG++LA  +  +++FFETSA+ NVNV EAF  +A D+  R++++ + +  G
Sbjct:   63 KKLKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANVKNWMRQIEQHASESVNKILIGNKCDVDPADRRVSLEQGRKLAEEY--RIKFFETSAKENVNVDEAFYTVARDIALRIDNEVDLTASG 192

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: UPI0019633F59 (ras-related protein Rab-13 n=2 Tax=Polypteridae TaxID=8289 RepID=UPI0019633F59)

HSP 1 Score: 158 bits (400), Expect = 2.600e-46
Identity = 77/126 (61.11%), Postives = 103/126 (81.75%), Query Frame = 0

Query:    2 GKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQ 127
            GKK KLQ+WDTAGQERF+ IT+AYYRG+MGI+LVYD++DEKSF+N+ NWM+ IK NAS  VN  ++GNKCD+ +  R+VS E G++LA  HG  +RFFETSA+S++NV EAF GLA D++++ E +
Sbjct:   54 GKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVNQMLLGNKCDI-ESRRKVSKEVGEKLAKDHG--IRFFETSAKSSLNVEEAFLGLARDILQKNEKK 176

[Close]

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Match: A0A024GI55_9STRA (Ion_trans domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GI55_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.070e-46
Identity = 83/154 (53.90%), Postives = 110/154 (71.43%), Query Frame = 0

Query:    2 GKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNWMRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFETSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSKADGCC 155
            GK+ KLQIWDTAGQERFR IT+AYYRG+MGIL+VYDV+D+ SF+N+ NWM QIK NAS +VN  ++GNKCDV   +R V+ +QGQ LA   G  + FFETSA+SN+N+  AF  +A D+ +RL   D+  L      + R ++ +S+   DGCC
Sbjct:  485 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIGNKCDVDSSERAVTTQQGQELADEFG--IHFFETSAKSNINIDAAFHAIAVDIQQRLAEGDQDRLDVANGTKFRVDE-QSEESNDGCC 635

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig108.682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KUS8_9PHAE	1.480e-76	77.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FME1_ECTSI	2.770e-76	78.06	Rab8B, RAB family GTPase n=1 Tax=Ectocarpus silicu...	[more]
A0A1J3ISU9_NOCCA	2.660e-53	58.44	Ras-related protein RAB1BV (Fragment) n=1 Tax=Nocc...	[more]
A0A067CHF2_SAPPC	7.150e-53	57.79	Uncharacterized protein n=5 Tax=Saprolegniaceae Ta...	[more]
A0A485LS68_9STRA	6.170e-52	56.49	Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=...	[more]
A0A484DYW2_BRELC	6.470e-49	54.55	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
H3G925_PHYRM	9.090e-49	53.90	Uncharacterized protein n=19 Tax=Oomycota TaxID=47...	[more]
W7U3B0_9STRA	4.600e-47	60.61	Rab8-family small gtpase n=2 Tax=Monodopsidaceae T...	[more]
UPI0019633F59	2.600e-46	61.11	ras-related protein Rab-13 n=2 Tax=Polypteridae Ta...	[more]
A0A024GI55_9STRA	3.070e-46	53.90	Ion_trans domain-containing protein n=1 Tax=Albugo...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 98..120 score: 39.64 coord: 60..73 score: 42.48
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 1..123 e-value: 1.4E-5 score: -46.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..123 e-value: 1.1E-43 score: 161.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 2..123 e-value: 4.8E-10 score: 27.2
None	No IPR available	GENE3D	3.40.50.300		coord: 1..138 e-value: 1.1E-44 score: 154.1
None	No IPR available	PANTHER	PTHR24073:SF510	RAS-RELATED PROTEIN RAB-13	coord: 2..136
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 2..136
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..155 score: 25.175
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 2..121 e-value: 3.3E-40 score: 137.3
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 2..114 e-value: 8.0E-17 score: 59.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..136

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig108	contig	P-lacustris_contig108:136910..142564 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig108.682.1	mRNA_P-lacustris_contig108.682.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig108 135683..143930 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig108.682.1 ID=prot_P-lacustris_contig108.682.1|Name=mRNA_P-lacustris_contig108.682.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=156bp
MGKKAKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDEKSFKNVGNW
MRQIKANASPDVNVTVVGNKCDVSDDDREVSFEQGQRLAAGHGEQVRFFE
TSARSNVNVTEAFEGLATDVIKRLESQDEASLQGVPALRLRPEDPKSDSK
ADGCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase