prot_P-lacustris_contig108.675.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig108.675.1
Unique Nameprot_P-lacustris_contig108.675.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length598
Homology
BLAST of mRNA_P-lacustris_contig108.675.1 vs. uniprot
Match: A0A6H5L010_9PHAE (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L010_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 7.560e-135
Identity = 298/552 (53.99%), Postives = 327/552 (59.24%), Query Frame = 0
Query:    6 SRASRSDH---LAERHPDRHDCRGGAEEETARRAFSRSQDLPQDPAFDAPPPQASPVAASALCRVFTFLRNSCVGCPANNRALRHTGLAEAASAALQFAVDQAPFACGAATSHPAA-TMDCNRGVGGTSDVRLAVRAGLQFACNYCVGGEENKALLWADWFPRGLMELVNGLKTDRGLLSLAVALIHTCCASPPPCEGRGDGCGDRGSTAEHGEGIXXXXXXXXXXXXXXRERLGRLVADRAFCCLLVKVV----------VPRSASNSVV---GELDHDPAREWLYLLFCSLVQEGLCRDVFDNVGIRAGGRQRQPRPRRPQSGGAVVEPSTEEMVVERREEGHDAVDVGGSARVSTGAAGLEGLDGKERKGGRGDEEAEAEEDDFFF------PVTPEQLIVLNLAEIAA------ADEAVTGGERPNALQRQACAALLGWLAGLLSAMPLSQTLLPPTDTSP---------------VPPAVKKPAAELPQRTTPSPTSTEGQNEDVVVDEVSDVETERVRRSMREEARSATLRALAALLSGCGDETRQ 513
            SR  R+DH     +R  +  DCRGG  +E A RA     DLPQDP FD  PP+  P AA AL R FTFLRN+C GCP NN ALRHTGLAEAASA LQFAVDQA FAC A TSHPAA T +C   VGGTSDVRLAVRAGLQFA NYC G EE+K  LWA WFPRGLMELVN LKTDRGLLSLAVALIH CC SP P E   D   DRGS  ++G G   X           RERL  L AD+AFC                 V  S S+S     GE D DPA EWLYLLFC  VQE LCR V+DNVGIRAG  +R+ RPRR    GAVV  S    V +   E   A    GS R  +G    E   G+  KG R DE                 PVTPEQLIVLNLAE+A       +DE VTGGE P+  QRQAC+AL  WL GLLSAMPLSQ+LLP T T+                      KP          SP+S+ G +ED      +D ETERVRRSMREEARSA LR LAALL+GC DETRQ
Sbjct:   34 SREPRNDHDGGHTDRQQNGQDCRGGVGDEAATRAVLPGGDLPQDPPFDTAPPRTPPAAARALRRAFTFLRNACAGCPGNNHALRHTGLAEAASA-LQFAVDQALFAC-ATTSHPAASTAECQSEVGGTSDVRLAVRAGLQFAYNYCAGSEESKVSLWAAWFPRGLMELVNELKTDRGLLSLAVALIHNCCISPRPREPGEDDGSDRGSNRDNGAGEAGXEEADGGERSRGRERLALLSADKAFCXXXXXXXXXXXXXXXXXVGASGSHSRERSGGEPDDDPAAEWLYLLFCCFVQERLCRRVYDNVGIRAG--KRRKRPRRRGGCGAVVVDSA--RVAQSGGEEDGAAGGSGSVRAISGVGRGEEEWGEGGKG-RVDEXXXXXXXXXXXXXXXXXPVTPEQLIVLNLAELATGKCGWNSDEVVTGGECPSPRQRQACSALASWLTGLLSAMPLSQSLLPRTGTAQPXXXXXXXXXXXXXXXXXXXXKPL---------SPSSSAG-DEDRGDGVAADAETERVRRSMREEARSAALRGLAALLAGCSDETRQ 568          
BLAST of mRNA_P-lacustris_contig108.675.1 vs. uniprot
Match: D8LJX9_ECTSI (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX9_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 2.610e-81
Identity = 201/431 (46.64%), Postives = 217/431 (50.35%), Query Frame = 0
Query:   97 ALQFAVDQAPFACGAATSHPAA-TMDCNRGVGGTSDVRLAVRAGLQFACNYCVGGEENKALLWADWFPRGLMELVNGLKTDRGLLSLAVALIHTCCASPPPCEGRGDGCGDRGSTAEHGEGIXXXXXXXXXXXXXXRERLGRLVADRAFCCLLVKVVVPRSASNSVVGELDHDP-------------AREWLYLLFCSLVQEGLCRDVFDNVGIRAGGRQRQPRPRRPQSGGAVVEPSTEEMVVERREEGHDAVDVGGSARVSTGAAGLEGLDGKERKGGRGDEEAEAEEDDFFFPVTPEQLIVLNLAEIAAADEAVTGGERPNALQRQACAALLGWLAGLLSAMPLSQTLLPPTDTSPVPPAVKKPAAELPQRTTPSPTSTEGQNEDVVVDEVSDVETERVRRSMREEARSATLRALAALLSGCGDETRQ 513
            ALQFAVDQAPFAC A TSHPAA T +C   VG  SDVRLAVRAGLQFA NYC G EE+KA LWA WFPRGLMELVN LKTDRGLLSLAVAL+H CC SPPP E R D    R S  ++G G  XXXXXXXX     RERL  L AD+AFCC                                    A EWLYLLFC  VQE LCR V+DNVGIRAG R ++PR                                                                                        ADE VTGGERP   QRQAC AL  WL GLLSA+PLSQ+LLP T T+  P                        +E+      +D ETERVRRSMREEARSA LRALAALL+GC DETRQ
Sbjct:    3 ALQFAVDQAPFAC-ATTSHPAARTAECQSEVGDASDVRLAVRAGLQFAYNYCAGSEESKASLWAAWFPRGLMELVNELKTDRGLLSLAVALVHNCCISPPPREPREDDGSPRESNRDNGTGEAXXXXXXXXERSRGRERLDLLSADKAFCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEWLYLLFCCFVQERLCRRVYDNVGIRAGKRTKRPR--------------------------------------------------------------------------------------RQADEVVTGGERPCPRQRQACGALAAWLTGLLSAIPLSQSLLPRTGTAQPPXXXXXXXXXXXXXXXXXXXXXSAGHEERGDGVATDAETERVRRSMREEARSAALRALAALLAGCSDETRQ 346          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig108.675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L010_9PHAE7.560e-13553.99Atx10homo_assoc domain-containing protein n=1 Tax=... [more]
D8LJX9_ECTSI2.610e-8146.64Atx10homo_assoc domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13255ATAXIN-10coord: 56..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig108contigP-lacustris_contig108:9396..13055 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig108.675.1mRNA_P-lacustris_contig108.675.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig108 9255..15502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig108.675.1 ID=prot_P-lacustris_contig108.675.1|Name=mRNA_P-lacustris_contig108.675.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=598bp
MPTSQSRASRSDHLAERHPDRHDCRGGAEEETARRAFSRSQDLPQDPAFD
APPPQASPVAASALCRVFTFLRNSCVGCPANNRALRHTGLAEAASAALQF
AVDQAPFACGAATSHPAATMDCNRGVGGTSDVRLAVRAGLQFACNYCVGG
EENKALLWADWFPRGLMELVNGLKTDRGLLSLAVALIHTCCASPPPCEGR
GDGCGDRGSTAEHGEGIGAERETGKEEEGGGRERLGRLVADRAFCCLLVK
VVVPRSASNSVVGELDHDPAREWLYLLFCSLVQEGLCRDVFDNVGIRAGG
RQRQPRPRRPQSGGAVVEPSTEEMVVERREEGHDAVDVGGSARVSTGAAG
LEGLDGKERKGGRGDEEAEAEEDDFFFPVTPEQLIVLNLAEIAAADEAVT
GGERPNALQRQACAALLGWLAGLLSAMPLSQTLLPPTDTSPVPPAVKKPA
AELPQRTTPSPTSTEGQNEDVVVDEVSDVETERVRRSMREEARSATLRAL
AALLSGCGDETRQLTAAKVATSASAVAIVPSKVAVEPPPATAGFVAQHAQ
TAAEAKVVGSIDEDASAARGCRGPLEMSSAAVSHHRQNSYHRRKLRR*
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