prot_P-lacustris_contig1058.532.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig1058.532.1
Unique Name	prot_P-lacustris_contig1058.532.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	531

Homology

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BLAST of mRNA_P-lacustris_contig1058.532.1 vs. uniprot
Match: D8LBB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB8_ECTSI)

HSP 1 Score: 857 bits (2215), Expect = 5.770e-311
Identity = 425/529 (80.34%), Postives = 448/529 (84.69%), Query Frame = 0

Query:    1 MTNFSLEADMRRAKERCPACARQQLEIENGQYVPGNEVKGQLHATPRSGGSSRRARAAAAASSPFSPLRGWTSGSQGGGNEAGGRVNNALAQHEVRPEEIICNHCMCSNENHEDTGPNGQRCCGGLREGPWDRVCELCKNSESCRRWAR-RACSAANAPAEQAD-APCS-NTSNDTASEKPCKIEGRGKFCTHCTCPCADVNPHKFENKSTWMSSNPEIQRACGICLACWAGWCIPVSGAKRKLVGATLEPEEPFARQWRPGRDADVFVLTGLFDELTGLLPENGFPYAVFGSSLRYFKGLIGRTEAKHAMREAGVTPGNRSGAIGEAWSGGGSMYPPERPAGARKVVAAPLRQGEGANRHFSRHHGRRDHNWQWDMLQSPWSLALMAKGRLALGVSEEEASEFEEAGIIAFPGHVVKHKDSVKNGGYGKTIGTLVLRSPESAFVCVQVQGERLGKAVAAAEELGVELPPRFAEKGRFKFAINELDAWAMVGGAARNDAEHAVVCGRKAIPAGEPGEGFVRVAFNMRWG 526
            MTNFSL+ADMRRAK+RCPACARQQL IENGQYVPG+EVKGQL+ T                                G N       NALAQHE+RPEEI+C HC+CSNENHEDTGPNGQRCCGGLREG WDRVCELCK SESCR WAR RAC     PAE+A  AP   N + ++  EKPCK EGR  FC HCTCPCA V+PH FE+KS WMS+NPE+QRAC ICL CWAGWCIP+SG KRKLVGAT+EPEEPFARQWRPGRDADVFVLTGLFDELTGLLPENGFPYAVFGSSLRYFKGLIG  EAKHA++EAGVTPG+RSGAIGEAWSGGGSMYPPERPAGARKVVAAPLRQGEGANRHFSR HGRRDHNWQWDML+SPWSL LMAKGRLALGVSEEEA+EFEEAGIIAFPGHVVKHKDSVKNGGYGKTIGTLVLRSPESAFVCVQ QGERLG+AV  AEELGVELPPR AEKGRFKFAINELDAWAMVGG ARNDAEHAVVCGRK IPAGEPGEGFVRVAFNMRWG
Sbjct:    1 MTNFSLQADMRRAKDRCPACARQQLHIENGQYVPGDEVKGQLYTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSN-----AYNALAQHEIRPEEIVCTHCLCSNENHEDTGPNGQRCCGGLREGLWDRVCELCKASESCRAWARARAC-----PAEEAGRAPGEPNHAGNSTGEKPCKTEGRANFCMHCTCPCAQVHPHTFEDKSNWMSTNPEVQRACRICLPCWAGWCIPLSGTKRKLVGATMEPEEPFARQWRPGRDADVFVLTGLFDELTGLLPENGFPYAVFGSSLRYFKGLIGSAEAKHALKEAGVTPGDRSGAIGEAWSGGGSMYPPERPAGARKVVAAPLRQGEGANRHFSRVHGRRDHNWQWDMLKSPWSLGLMAKGRLALGVSEEEANEFEEAGIIAFPGHVVKHKDSVKNGGYGKTIGTLVLRSPESAFVCVQGQGERLGRAVELAEELGVELPPRVAEKGRFKFAINELDAWAMVGGTARNDAEHAVVCGRKVIPAGEPGEGFVRVAFNMRWG 519

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig1058.532.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig1058.532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LBB8_ECTSI	5.770e-311	80.34	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig1058	contig	P-lacustris_contig1058:33709..37023 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig1058.532.1	mRNA_P-lacustris_contig1058.532.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig1058 31143..38609 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig1058.532.1 ID=prot_P-lacustris_contig1058.532.1|Name=mRNA_P-lacustris_contig1058.532.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=531bp
MTNFSLEADMRRAKERCPACARQQLEIENGQYVPGNEVKGQLHATPRSGG
SSRRARAAAAASSPFSPLRGWTSGSQGGGNEAGGRVNNALAQHEVRPEEI
ICNHCMCSNENHEDTGPNGQRCCGGLREGPWDRVCELCKNSESCRRWARR
ACSAANAPAEQADAPCSNTSNDTASEKPCKIEGRGKFCTHCTCPCADVNP
HKFENKSTWMSSNPEIQRACGICLACWAGWCIPVSGAKRKLVGATLEPEE
PFARQWRPGRDADVFVLTGLFDELTGLLPENGFPYAVFGSSLRYFKGLIG
RTEAKHAMREAGVTPGNRSGAIGEAWSGGGSMYPPERPAGARKVVAAPLR
QGEGANRHFSRHHGRRDHNWQWDMLQSPWSLALMAKGRLALGVSEEEASE
FEEAGIIAFPGHVVKHKDSVKNGGYGKTIGTLVLRSPESAFVCVQVQGER
LGKAVAAAEELGVELPPRFAEKGRFKFAINELDAWAMVGGAARNDAEHAV
VCGRKAIPAGEPGEGFVRVAFNMRWGGKTT*