prot_P-lacustris_contig996.16253.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig996.16253.1
Unique Nameprot_P-lacustris_contig996.16253.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length200
Homology
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BLAST of mRNA_P-lacustris_contig996.16253.1 vs. uniprot
Match: D7G0U1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U1_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.760e-64
Identity = 94/118 (79.66%), Postives = 102/118 (86.44%), Query Frame = 0 
Query:    1 MDEDGMFLMLKMCNSCSLNKGSWKKCMSRRHNPRMSTVWEGELTNGHRQCVKPDQAITIYKLRDHDTNEEYLEFDEKIIFQTPCHNCLNIRSCLSSGHKLVDWRPSFARSRVADSARP 118
            MD+DG+FLMLKMCN CS NKGSWKKCMSRRHNPRMSTV E ELT  HRQCVKPDQAITIYKL DH+TNE+YLEFDEKIIFQT C  CLNI+SCL  GHKL+DWRP+FA  RVA S+ P
Sbjct:    1 MDQDGLFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTYSHRQCVKPDQAITIYKLHDHETNEDYLEFDEKIIFQTACRMCLNIKSCLREGHKLIDWRPTFAGGRVAGSSHP 118
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BLAST of mRNA_P-lacustris_contig996.16253.1 vs. uniprot
Match: A0A6H5LER2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LER2_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.380e-48
Identity = 80/97 (82.47%), Postives = 86/97 (88.66%), Query Frame = 0 
Query:    1 MDEDGMFLMLKMCNSCSLNKGSWKKCMSRRHNPRMSTVWEGELTNGHRQCVKPDQAITIYKLRDHDTNEEYLEFDEKIIFQTPCHNCLNIRSCLSSG 97
            MD+DG+FLMLKMCN CS NKGSWKKCMSRRHNPRMSTV E ELTN HRQCVKPDQAITIYKL DH+TNE+YLEFDE+IIFQT C  CLNI+SCL  G
Sbjct:    1 MDQDGLFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTNSHRQCVKPDQAITIYKLHDHETNEDYLEFDEEIIFQTACRMCLNIKSCLRLG 97
[Close]
BLAST of mRNA_P-lacustris_contig996.16253.1 vs. uniprot
Match: D7G0T9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T9_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.020e-29
Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 0 
Query:    1 MDEDGMFLMLKMCNSCSLNKGSWKKCMSRRHNPRMSTVWEGELTNGHRQCVKPDQAITIYKLRDHDTNEEYLEFDEKIIFQTPCHNCLNIRSCLSSGHKLVDWRPSFARSRVADSAR 117
            MD DG  L++  CN+C +NK   + C+ R+HN R++ V   EL   HRQCVKPDQ +TI+KL D +T EE +E+   +IFQ PC +C+++++C+  GH+L DW P   R R + + R
Sbjct:    1 MDVDGTCLVVSPCNNCRINKNGVQACIMRKHNARLTAVKRDELAARHRQCVKPDQTMTIFKLVDRNTGEESVEYSPDMIFQRPCASCIHLKTCILGGHELTDWTPEGGRGRASQNKR 117
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig996.16253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0U1_ECTSI1.760e-6479.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LER2_9PHAE1.380e-4882.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0T9_ECTSI1.020e-2944.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig996contigP-lacustris_contig996:60815..64981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig996.16253.1mRNA_P-lacustris_contig996.16253.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig996 60815..65008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig996.16253.1 ID=prot_P-lacustris_contig996.16253.1|Name=mRNA_P-lacustris_contig996.16253.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=200bp
MDEDGMFLMLKMCNSCSLNKGSWKKCMSRRHNPRMSTVWEGELTNGHRQC
VKPDQAITIYKLRDHDTNEEYLEFDEKIIFQTPCHNCLNIRSCLSSGHKL
VDWRPSFARSRVADSARPNQPPAAASPEDTPPSPPPPPTLSAPPTPAVAG
SGGAKKGRGGGTPSRTKKTRGRSSAAAEAVAEEGLDEHDRGGGGRKVSSA
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