prot_P-lacustris_contig995.16240.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig995.16240.1
Unique Nameprot_P-lacustris_contig995.16240.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length304
Homology
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BLAST of mRNA_P-lacustris_contig995.16240.1 vs. uniprot
Match: D7FQJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ1_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 3.950e-57
Identity = 93/109 (85.32%), Postives = 100/109 (91.74%), Query Frame = 0 
Query:  195 MPDLSSRMHEAKSSPEASRELMLRIRRSNVQLGDGRIKTLTTTQRDSMDEIVEATRKMPPGFNARTKQDPRYSSIKLGNPDTKNLWTTSNKMPNWYAPETYARQATPNF 303
            MPDL SRM EA SSPEA+RELMLRIRRSNVQLGDGRIKTLTT+Q DSMDEIVEAT KM PGFNARTKQDPR+SSI+LG+P  +NLWTTSN+MPNWYAPETYARQ TPNF
Sbjct:    1 MPDLRSRMREANSSPEANRELMLRIRRSNVQLGDGRIKTLTTSQHDSMDEIVEATSKMEPGFNARTKQDPRFSSIELGDPAAENLWTTSNRMPNWYAPETYARQTTPNF 109
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig995.16240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQJ1_ECTSI3.950e-5785.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig995contigP-lacustris_contig995:48440..52242 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig995.16240.1mRNA_P-lacustris_contig995.16240.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig995 48440..52242 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig995.16240.1 ID=prot_P-lacustris_contig995.16240.1|Name=mRNA_P-lacustris_contig995.16240.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=304bp
MLPTHGNRAARRRSLEPPLRPSVLAARNMEMKKRLSASSLMLGDDGPENR
DWSLSSSQQPPDAGALDSSQREKNQALKKALKKAQIVLGNDPAEWGSSNT
MPAPTDDLSCYRGRLHVDTANFIKTSSVKMGSAYPGSQHKTSMSREGLKI
PDYDASVELFRTNRSLRNRLREAGRTTRIIDPDGEGARYQSSNTMPDLSS
RMHEAKSSPEASRELMLRIRRSNVQLGDGRIKTLTTTQRDSMDEIVEATR
KMPPGFNARTKQDPRYSSIKLGNPDTKNLWTTSNKMPNWYAPETYARQAT
PNF*
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