prot_P-lacustris_contig99.16183.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig99.16183.1
Unique Nameprot_P-lacustris_contig99.16183.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length105
Homology
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BLAST of mRNA_P-lacustris_contig99.16183.1 vs. uniprot
Match: D8LNR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR7_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 3.990e-39
Identity = 75/105 (71.43%), Postives = 86/105 (81.90%), Query Frame = 0 
Query:    1 MRVGLATARALGFLTRRARRGRGQYTLAEPHRTPNVG-GPRTAGPRTTSSSSVAQGRMFEDFVMSRSQLGATVMLATQIRTTMCAGGRGDFSLEMEEDGDDDDGT 104
            MRVGLATARALGF+TRRARRGRG  + +  HRTPN   GP+ AGPRT SSS+ +QGRM E+FVMSRSQLGA  +LATQIR  +C+ G GDFSLE+E DGDDDDGT
Sbjct:    1 MRVGLATARALGFVTRRARRGRGPCSQSGLHRTPNAAAGPQAAGPRTASSSAASQGRMVEEFVMSRSQLGAATVLATQIRGAVCSVGGGDFSLEVEGDGDDDDGT 105
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig99.16183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNR7_ECTSI3.990e-3971.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig99contigP-lacustris_contig99:124344..127067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig99.16183.1mRNA_P-lacustris_contig99.16183.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig99 122383..127112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig99.16183.1 ID=prot_P-lacustris_contig99.16183.1|Name=mRNA_P-lacustris_contig99.16183.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=105bp
MRVGLATARALGFLTRRARRGRGQYTLAEPHRTPNVGGPRTAGPRTTSSS
SVAQGRMFEDFVMSRSQLGATVMLATQIRTTMCAGGRGDFSLEMEEDGDD
DDGT*
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