prot_P-lacustris_contig99.16178.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig99.16178.1
Unique Nameprot_P-lacustris_contig99.16178.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length148
Homology
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: D8LNR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR1_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 3.360e-72
Identity = 116/149 (77.85%), Postives = 132/149 (88.59%), Query Frame = 0
Query:    1 MDVSSHTVPAAFCFIAVKLTWQSVQSCTPKRSKRGKLKGQGTTQ-QQQATQGSA-DSQGVHLSTDVSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLACERFL 147
            M+ SS+T+PAAFCFIAV+LT+Q+ +  TPKR KRGK+KG GTTQ QQQA QGSA  SQGV+L TDV+FK+ IL A+K LHGEVGS AYPVDVLSWDAV+GEGRLRVPARS+VPIRAALS VGSCG+VPCAIDV EVSPFLAGLACER+L
Sbjct:    1 MEASSYTLPAAFCFIAVQLTFQATRQATPKRPKRGKVKGGGTTQRQQQAPQGSAATSQGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSFVGSCGDVPCAIDVREVSPFLAGLACERYL 149          
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: A0A8J6EM83_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EM83_ELECQ)

HSP 1 Score: 67.8 bits (164), Expect = 1.010e-11
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   64 VSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLA 142
            V  KSLIL+ALK LHGEVG+ +YP+DVL +D       LR+ +  +V +  +L++VG      C+I V++ SPFL  LA
Sbjct:   43 VQLKSLILSALKELHGEVGA-SYPLDVLKFDGKTSSAILRIKSSGLVKLWTSLTMVGQYQGQLCSIRVLQTSPFLLALA 120          
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: Q07G50_XENTR (Ribonuclease P 14kDa subunit n=3 Tax=Xenopus TaxID=8353 RepID=Q07G50_XENTR)

HSP 1 Score: 65.1 bits (157), Expect = 1.290e-10
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   56 QGVHLSTDVSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLA 142
            +G  LS    FK L+++ALK LHGEVGS + P+D+LS+D       LRV +R +V + ++L+L+G   N  C+I V++ SPFL  LA
Sbjct:   43 EGAQLSA-TQFKLLVVSALKNLHGEVGS-SLPLDLLSFDEKTLCAVLRVCSRGLVKLWSSLTLLGHYKNHECSIRVIQTSPFLLALA 127          
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: A0A7D9IBD1_PARCT (Ribonuclease P subunit p14 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IBD1_PARCT)

HSP 1 Score: 64.7 bits (156), Expect = 1.770e-10
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   64 VSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLACE 144
            V  KSLI+ ALK LHG VG+ A  VDVL  +  +GE  LRV +  ++ +R++L+++ +    PC  +V +VSP+L  LA +
Sbjct:   36 VKLKSLIVNALKQLHGLVGA-AITVDVLKCEKTSGEIILRVKSSDLIKLRSSLTILNNYNGTPCRCNVKQVSPYLMSLAAD 115          
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: A0A0E9XE39_ANGAN (Uncharacterized protein n=1 Tax=Anguilla anguilla TaxID=7936 RepID=A0A0E9XE39_ANGAN)

HSP 1 Score: 63.5 bits (153), Expect = 4.300e-10
Identity = 33/77 (42.86%), Postives = 53/77 (68.83%), Query Frame = 0
Query:   66 FKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLA 142
            FK ++++AL+ L+GE+G+ A+P DVL ++       LRV    +V + +AL+L+GS  + PCA+ VV+VSPFL  L+
Sbjct:   45 FKQIVISALRDLYGEIGA-AFPFDVLKFEEDTLTAVLRVYNSGLVKLWSALTLLGSYHSEPCAVRVVQVSPFLLALS 120          
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: UPI001AACA93D (ribonuclease P protein subunit p14-like isoform X2 n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AACA93D)

HSP 1 Score: 63.2 bits (152), Expect = 6.040e-10
Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   56 QGVHLSTDVSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLA 142
            +GV L T   +KSLI++A+K LHGEVG+ + P+D+L +D       LR+ +   V +  +L+L+G   N  C+I V++VSPFL  LA
Sbjct:   36 EGVKL-TAAQYKSLIVSAVKELHGEVGA-SCPLDLLKYDDKTLSAILRINSSGFVKLWTSLTLLGHYQNQECSIRVLQVSPFLLALA 120          
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: UPI0008550BAE (ribonuclease P protein subunit p14 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008550BAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.190e-9
Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   56 QGVHLSTDVSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLA 142
            +GV L T   +KSLI++A+K LHGEVG+ + P+D+L ++       LR+ +   V +  +L+L+G   N  C++ V++VSPFL  LA
Sbjct:   36 EGVKL-TAAQYKSLIVSAVKELHGEVGA-SCPLDLLKYEEKTLSAILRIRSSGFVKLWTSLTLLGQYQNQACSVCVIQVSPFLLALA 120          
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: A0A2B4T178_STYPI (Ribonuclease P protein subunit p14 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4T178_STYPI)

HSP 1 Score: 60.1 bits (144), Expect = 8.770e-9
Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   64 VSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLACE 144
            V+FKS+++  L ALHG+VGS A  VD++ ++A   E  LRV    +V + +AL+L+    +  CAI V++VSP+L  L  +
Sbjct:   35 VTFKSILIQTLDALHGKVGS-AISVDIIKFEASLKEAILRVKESGLVKLWSALTLLSYYKDKRCAIYVIQVSPYLLSLGAD 114          
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: A0A1A8LBW7_9TELE (Uncharacterized protein n=8 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8LBW7_9TELE)

HSP 1 Score: 59.7 bits (143), Expect = 1.280e-8
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0
Query:   64 VSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGL 141
            V  KSLI+T LK LHGEVG+ A P DVL +D  +    LRV +  +V + ++L+L G   +  CA  V++VSPFL  L
Sbjct:   43 VELKSLIITGLKDLHGEVGA-ALPFDVLKFDEGSLTAVLRVCSGGLVKLWSSLTLQGYYQSQACAFRVLQVSPFLLAL 119          
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Match: UPI001F047F46 (ribonuclease P protein subunit p14-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F047F46)

HSP 1 Score: 58.2 bits (139), Expect = 4.770e-8
Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   64 VSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEGRLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLA 142
            V  KS I++A+K LHG VGS +  +D+L  D  NGE  LRV + ++V + ++L+L+    +  C  +V +VSP+L  LA
Sbjct:   37 VQLKSFIVSAVKQLHGSVGS-STVIDILKVDKRNGEIILRVKSSNLVKLWSSLTLINKYNDNACRFNVQQVSPYLMSLA 114          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig99.16178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LNR1_ECTSI3.360e-7277.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J6EM83_ELECQ1.010e-1145.57Uncharacterized protein n=1 Tax=Eleutherodactylus ... [more]
Q07G50_XENTR1.290e-1044.83Ribonuclease P 14kDa subunit n=3 Tax=Xenopus TaxID... [more]
A0A7D9IBD1_PARCT1.770e-1041.98Ribonuclease P subunit p14 n=3 Tax=Paramuricea cla... [more]
A0A0E9XE39_ANGAN4.300e-1042.86Uncharacterized protein n=1 Tax=Anguilla anguilla ... [more]
UPI001AACA93D6.040e-1042.53ribonuclease P protein subunit p14-like isoform X2... [more]
UPI0008550BAE1.190e-940.23ribonuclease P protein subunit p14 n=1 Tax=Nanoran... [more]
A0A2B4T178_STYPI8.770e-940.74Ribonuclease P protein subunit p14 n=1 Tax=Styloph... [more]
A0A1A8LBW7_9TELE1.280e-846.15Uncharacterized protein n=8 Tax=Nothobranchius Tax... [more]
UPI001F047F464.770e-840.51ribonuclease P protein subunit p14-like n=1 Tax=Xe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002759Ribonuclease P/MRP protein subunitPFAMPF01900RNase_P_Rpp14coord: 61..135
e-value: 6.8E-6
score: 26.3
IPR038085Rnp2-like domain superfamilyGENE3D3.30.70.3250coord: 54..147
e-value: 3.2E-6
score: 29.2
IPR038085Rnp2-like domain superfamilySUPERFAMILY160350Rnp2-likecoord: 62..140
NoneNo IPR availablePANTHERPTHR15441FAMILY NOT NAMEDcoord: 61..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig99contigP-lacustris_contig99:51915..53440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig99.16178.1mRNA_P-lacustris_contig99.16178.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig99 51606..53440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig99.16178.1 ID=prot_P-lacustris_contig99.16178.1|Name=mRNA_P-lacustris_contig99.16178.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=148bp
MDVSSHTVPAAFCFIAVKLTWQSVQSCTPKRSKRGKLKGQGTTQQQQATQ
GSADSQGVHLSTDVSFKSLILTALKALHGEVGSWAYPVDVLSWDAVNGEG
RLRVPARSIVPIRAALSLVGSCGNVPCAIDVVEVSPFLAGLACERFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002759RNase_P/MRP_subunit
IPR038085Rnp2-like_sf