prot_P-lacustris_contig988.16170.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig988.16170.1
Unique Nameprot_P-lacustris_contig988.16170.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length113
Homology
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: A0A6H5JWW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW4_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 4.790e-8
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 MLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVNDEKMIPADV 60
            M  LL  GA + A+D DG+  L+LA  R   GLEA  D+LLRWGADE+A+N++   PAD+
Sbjct:  536 MNTLLGHGASLTAQDVDGNTPLHLACYRQDSGLEAPVDLLLRWGADETALNNDGKTPADL 595          
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 4.030e-7
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    1 MLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVNDEKMIPA 58
            M  LL  GA + A+D++G+  L++A  R  KGLEA  D+LLRWGADE+A+N+    PA
Sbjct:  322 MHTLLWHGASLTAQDTEGNTPLHVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPA 379          
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D7FYG4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG4_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 3.580e-6
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    1 MLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVNDEKMIPAD 59
            MLALLQ+GA   A D DGH  L+L     +    A AD+LLRWGA+E+A +++   PAD
Sbjct:  342 MLALLQKGANANAPDDDGHGPLHLVCKYPKARSVAVADLLLRWGAEETATDNDGNTPAD 400          
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D7FYF9_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF9_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 1.240e-5
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    1 MLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVNDEKMIPADV 60
            MLALLQ+GA   ARD DG   L L  + T+    A AD+LLRWGADE+A +++    AD+
Sbjct:   27 MLALLQKGANANARDDDGRGSLLLVCN-TKASSVAMADLLLRWGADETAADNDGNTAADL 85          
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 5.390e-5
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 0
Query:    1 MLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVNDEKMIPAD 59
            M AL Q GA V  R + G+  L+       +GLEAA D+LLRWGADE+ +N     PAD
Sbjct:    1 MHALFQHGAQVGVRGNQGYTPLHETCWERHEGLEAAVDMLLRWGADETTLNYGGASPAD 59          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JWW4_9PHAE4.790e-851.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS36_ECTSI4.030e-750.00Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FYG4_ECTSI3.580e-649.15Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FYF9_ECTSI1.240e-550.00EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LNI8_ECTSI5.390e-547.46EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..65
e-value: 8.9E-6
score: 27.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..52
score: 10.498

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig988contigP-lacustris_contig988:46591..46929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig988.16170.1mRNA_P-lacustris_contig988.16170.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig988 45620..47138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig988.16170.1 ID=prot_P-lacustris_contig988.16170.1|Name=mRNA_P-lacustris_contig988.16170.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=113bp
MLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAV
NDEKMIPADVDSQLRWFLGQPVFVGRARADAATAGSGSGRQGLASPRLAG
HASVARRESHER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom