mRNA_P-lacustris_contig988.16170.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.260e-35 Identity = 140/409 (34.23%), Postives = 189/409 (46.21%), Query Frame = 3
Query: 39 MHIYPELTCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFL----ANVSAGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALY--SVPGNFLRALRRCPAFGCRRCRRELPRFYAQQQ*FCPQNDCSWRP*PARQRLGDRWDQP*LAGRFRCN-------PLHEAAENGLDKVVASLMLKGV-DKDALDLSGNSPLMAAIQYGHLVVVETVLVADAHVTVRFEG*------------------------REGSESDSWTCGGM*LWLYSPHRPAHRCTT*PGRCR*IADPGRGGCRAHRGQSGRTPLLEAADQSNSKAMLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVNDEKMIPADV 1151
MH+YP+ L+G E EIFKL+ AT EQW LRA HAAAR N+ L AN AGWRG RGRT+LD AALGGN +V++ LL G SDVNVVS +SS+ SAL+ SV G+ A ++L A P + C R GD D + G + PLH AA +G ++VV++L+ + D DALD G SPLM A + GH VE +L A A + +R G G + G+ ++ A G AD C A G TPL ++ +A++ALL+RG V + G L+L +G++ D+LLRWGA E+AVN + P+D+
Sbjct: 1 MHLYPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLE--HAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVAT-LLASGCASDVNVVS-LSSRRSALHVASVCGHEAAA-------------KKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARGAQAVDVLLDAG-----ADVNAKACPALH---GFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDI 384
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.480e-27 Identity = 95/241 (39.42%), Postives = 120/241 (49.79%), Query Frame = 3
Query: 39 MHIYPELTCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFL----ANVSAGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALYSVPGNFLRALRRCPAFGCRRCRRELPRFYAQQQ*FCPQNDCSWRP*PARQRLGDRWDQP*LAGRFRCNPLHEAAENGLDKVVASLMLKGVDKDALDLSGNSPLMAAIQYGHLVVVETVLVADAHVTV 749
M++YP+ LQGMESEI+KLVS+ AT +QW LR HAAAR N++ N L A+ SAGWRG RTL+D AALGG+ +VS ALLR GAQ DVN VS +SSK SALY+ + G HE A GLD++V++L+L+G DA D SG +PL+ A GHL VV T+L A A V +
Sbjct: 1 MYVYPKRRLLQGMESEIWKLVSYGATPQQWKEWLRVPLE--HAAARGNLNLVNSLLEAGADGSAGWRGCLDRTLIDAAALGGSEPVVS-ALLRAGAQPDVNTVS-ISSKRSALYTAT---------------------------------------------------------VCG-------HEHAARGLDRIVSALLLRGAYTDAQDTSGATPLIYACGSGHLSVVNTLLAAGADVDI 173
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.080e-24 Identity = 129/399 (32.33%), Postives = 168/399 (42.11%), Query Frame = 3
Query: 60 TCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFLANVS----AGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALYSVPGNFLRALRRCPAFGCR-----RCRRELPRFYAQQQ*FCPQNDCSWRP*PARQRLGDRWDQP*LAGRFRCN---PLHEAAENGL-------------DK-----VVASLMLKGVDKDALDLSGNSPLMAAIQYGHLVVVETVLVADAHVTVRFEG*REGSESDSWTCGGM*LWLYSPHRPAHRCTT*PGRCR*IADPGRGGCRAHRGQSGRTPLLEAADQSNSKAMLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVNDEKMIPADVDSQLR 1166
T G E EIFK+VS AT EQW LRA HAAA N++ + L AGWRG RGR+LLD AALGGN ++S ALL+ G DVNVV+ + + + SV G A R+ G R + P F A + C L P + R PLH AA+ GL DK V L+ G D D DL +S L+ A QY + V++ +L V V D W H A +T G + D G GRT L AA+ N++A+LALL+RGA V DG L+L S + D+LLR GA E AV+ P D+ +++
Sbjct: 6 TSPSGEEVEIFKIVSEGATPEQWARWLRAPLE--HAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMS-ALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKA------GCD----DLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVDVNVG---------EDHWN---------PLHWAAQFNST--GCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQ 371
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 114 bits (284), Expect = 1.390e-23 Identity = 124/387 (32.04%), Postives = 151/387 (39.02%), Query Frame = 3
Query: 39 MHIYPELTCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFL----ANVSAGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALYSVPG-NFLRALRRCPAFGCRRCRRELPRFYAQQQ*FCPQNDCSWRP*PARQRLGDRWDQP*LAGRFRCNPLHEAAENGLDKVVASLMLKGVDKDALDLSGNSPLMAAIQYGHLVVVETVLVADAHVTVRFEG*REGSESDSWTCGGM*LWLYSPHRPAHRCTT*PGRCR*IADPGRGGC-------------RAHRGQSGRTPLLEAADQSNSKAMLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVNDEKMIPA 1145
MH+YPE LQGMESEI+KLVS+SAT +QW LR HAAAR N++ + L A+ SAGWRG RGRTL+D AALGG+ +VS+ LLR GAQ DVNVVS VSSK SALY+ A RR A G E P L A A VT+R +S S + G S PL A D N KAM LL GA + A+D++G+ L++A R KGLEA D+LLRWGADE+A+N+ PA
Sbjct: 1 MHVYPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLE--HAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVST-LLRAGAQWDVNVVS-VSSKRSALYTATMCGHEDAARRLVAAGAD-VDFEDP---VHGNPVLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAGADVTIRDNCDHSALDSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSEGGSLAPPLFSATDPRNLKAMHTLLWHGASLTAQDTEGNTPLHVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPA 379
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 112 bits (281), Expect = 2.750e-23 Identity = 70/115 (60.87%), Postives = 82/115 (71.30%), Query Frame = 3
Query: 39 MHIYPELTCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFL----ANVSAGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALYS 371
MH+YPE QGM SEI+KLVSHSAT +QW LR HAAAR N++ N L A+ SAGW+G RGRTL+D AALGG+ +VS ALLR GAQ DVNVVS VSSK S+LY+
Sbjct: 1 MHVYPERRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLE--HAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVS-ALLRAGAQPDVNVVS-VSSKRSSLYT 111
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 111 bits (278), Expect = 6.230e-23 Identity = 121/383 (31.59%), Postives = 156/383 (40.73%), Query Frame = 3
Query: 39 MHIYPELTCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFL----ANVSAGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALYSVPGNFLRALRRCPAFGCRRCRRELPRFYAQQQ*FCPQNDCSWRP*PARQRLGDRWDQP*LAG-------RFRCNPLHEAAENGLDKVVASLMLK-GVDKDALDLSGNSPLMAAIQYGHLVVVETVLVADAHVTVRFEG*REGSESDSWTCGGM*LWLYSPHRPAHRCTT*PGRCR*IADPGRGGCRAHRGQSGRTPLLEAADQSNSKAMLALLQRGAIVPARDSDGHLLLNLASSRTRKGL-EAAADVLLRWGADESAVNDEKMIPAD 1148
MH+YP+ L+G E EIFKL+S AT EQW LRA HAAAR N+ L A+ AGWRG RGRT+LD AA G DVNVVS VSSK SAL+ G R L A + P + C A GD + G RF PLH AA G +VV++L+ +A D +SPLM A GH VE +L A A T+R + GG + + G PL +A + + M+ALL+R +D+ G L+ A G A D+LLRWGA E+A++ P+D
Sbjct: 1 MHLYPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLE--HAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLD-AAXXXXXXXXXXXXXXSGCAPDVNVVS-VSSKRSALHLAV-----------VCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGRTPLHVAAAVGNSRVVSTLLGDTSTSINARDNDLHSPLMLASANGHRSTVEALLRAGADTTLRCYSGGVSDMAALEMAGGEVVDVXXXXXXXXXXXX---------------------AGGSIPLHASAVHGHDETMVALLKREGNFDEQDNAGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETPSD 347
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 111 bits (277), Expect = 1.250e-22 Identity = 129/411 (31.39%), Postives = 174/411 (42.34%), Query Frame = 3
Query: 39 MHIYPELTCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFL----ANVSAGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALYSVPGNFLRALRRCPAFGCRRCRRELPRFYAQQQ*FCPQNDCSWRP*PAR--------QRLGDRWDQP*LAGRFRCN--------PLHEAAENGLDKVVASLMLKGVDKDAL--DLSGNSPLMAAIQYGHLVVVETVLVADAHVTVR------FEG*REGSESDSWTCGGM*LWLYSPHRPAHRCTT*PGRCR*IADPGRGGCRAH-----------RGQSGRTPLLEAADQSNSKAMLALLQRGAIVPAR-DSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVNDEKMIPADV 1151
MHI+PE T L G+ SE+FKLVS+ A++EQW LR A+ HAA+R N+ L A+ +GWRG R RTLLD AA A +DVN V+ VSS+ SALY+ C C E A ++ +D ++R A+ Q ++ L G R N PL AA + VV++L+L D + +PLM A++ GHL +VET+L A A ++R + CT I R G H + G TPL AA+ + ALLQ A V R D+ G L+ A R+GL A+ D+LLRWGADE+A N P DV
Sbjct: 1 MHIFPERTSLDGLGSELFKLVSYGASREQWAEWLRV--ALEHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLD-AAXXXXXXXXXXXXXXXXAGADVNKVT-VSSRRSALYTAT--------------C--CGHEA----AAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGARPNIRDDCGMAPLQAAALFAEEGVVSALLLAKADVNVGLGKTMYETPLMLAVRRGHLAIVETLLEAGADCSLRQLEDYSXXXXXXXXXXXXXXXXXXXXXXXVDAQDRAGCTALHTA---ILFSDRAGPAVHMLVKARADTELKSVGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDV 384
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 106 bits (264), Expect = 7.420e-22 Identity = 89/248 (35.89%), Postives = 125/248 (50.40%), Query Frame = 3
Query: 39 MHIYPELTCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFL----ANVSAGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALYSVPGNFLRALRRCPAFGCRRCRRELPRFYAQQQ*FCPQNDCSWRP*PARQRLGDRWDQP*LAGRFRCNPLHEAAENGLDKVVASLMLKGVDKDALDLSGN------SPLMAAIQYGHLVVVETVLVADAHVTVR 752
MHI+PE T L G+ SE+FKLVS+ A++EQW LR HAA+R N + L A+ AGWRG RGRTLLD AALGGN ++S AL+R GA +DVN V+ VSS+ SAL++ C C E A ++ D ++R A+ C+ L +A + ++V L + G + D G + M A++ GHL +VET+L A A ++R
Sbjct: 1 MHIFPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLE--HAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMS-ALIRGGAGADVNKVT-VSSRRSALHTAT--------------C--CGHEA----AAKRLVLTGADVNFRDPVAK-----------------CSVLSQAIQGSHTQLVNDLPIGGARPNIRDDCGLGKTTYVTTFMLAVRRGHLAIVETLLEAGADCSLR 207
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: A0A6H5JWW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW4_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 1.310e-17 Identity = 88/251 (35.06%), Postives = 117/251 (46.61%), Query Frame = 3
Query: 39 MHIYPELTCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFL----ANVSAGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALYSVPGNFLRALRRCPAFGCRRCRRELPRFYAQQQ*FCPQNDCSWRP*PARQRLGDRWDQP*LAGRFRCNP-LHEA-----AENGLDKVVASLMLKGVDKDALDLSGNSPLMAAIQYGHLVVVETVLVADAHVTVRFEG 761
M +YPE LQGMESEI+KLVS+SAT +QW LR HAAAR N++ N L A+ AGW+ GAQ DVNV+S VSSK SALY+ C D + R A + +D P C+ L+EA + GLD+VV++L+L+ DAL+ G++PL+ A + GHL VV T+L A A+VT+R G
Sbjct: 1 MRVYPERGLLQGMESEIWKLVSYSATPQQWKEWLRVPLK--HAAARGNLNRVNSLLEAGADGIAGWK---------------------------GAQWDVNVLS-VSSKRSALYTAT-------------------------------VCGHEDAARRLITAGADVN--FDDP-----VHCSHVLYEAILGGHTQLGLDRVVSTLLLRRAFTDALEKRGSTPLIYACESGHLSVVNTLLTAGANVTIRSIG 183
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 1.300e-16 Identity = 66/146 (45.21%), Postives = 80/146 (54.79%), Query Frame = 3
Query: 42 HIYPELTCLQGMESEIFKLVSHSATKEQWT*RLRATAAV*HAAARENVDHFNFLANV----SAGWRGFRGRTLLDVAALGGNVYIVSSALLREGAQSDVNVVSDVSSKGSALYS-----------------VPGNFLRALRRCPAF 416
HIYP+ L+G+E EIFKLVS+SAT EQW L+ AAA N D F L SAGWRG R R+L+D AA+GGNV +VS L GA+ DV VVS SSK SAL + NF+ +R+ PAF
Sbjct: 45 HIYPKRVLLEGLEIEIFKLVSYSATPEQWKEWLQVPLE--RAAALGNRDLFYKLLEAGAYGSAGWRGCRDRSLIDAAAVGGNVDVVSG-FLEAGAEPDVQVVS-WSSKTSALCTPVRFGHEDVARRLVTAGADVNFVDPMRKSPAF 186 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig988.16170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig988.16170.1 >prot_P-lacustris_contig988.16170.1 ID=prot_P-lacustris_contig988.16170.1|Name=mRNA_P-lacustris_contig988.16170.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=113bp MLALLQRGAIVPARDSDGHLLLNLASSRTRKGLEAAADVLLRWGADESAVback to top mRNA from alignment at P-lacustris_contig988:45620..47138+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig988.16170.1 ID=mRNA_P-lacustris_contig988.16170.1|Name=mRNA_P-lacustris_contig988.16170.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1519bp|location=Sequence derived from alignment at P-lacustris_contig988:45620..47138+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig988:45620..47138+ >mRNA_P-lacustris_contig988.16170.1 ID=mRNA_P-lacustris_contig988.16170.1|Name=mRNA_P-lacustris_contig988.16170.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=678bp|location=Sequence derived from alignment at P-lacustris_contig988:45620..47138+ (Pleurocladia lacustris SAG_25_93)back to top |