prot_P-lacustris_contig987.16167.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig987.16167.1
Unique Nameprot_P-lacustris_contig987.16167.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length275
Homology
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BLAST of mRNA_P-lacustris_contig987.16167.1 vs. uniprot
Match: D8LHQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ6_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 9.470e-12
Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 0 
Query:   30 PLDLGHLLLGFFRRYCSSSEEGITPETVLHIQGLTVDLGSARRALVASTEFSEAFQTLASAIDE 93
            P DLGHLLLGFFRRY  +S+E + P TVL ++ LTVDLGSA RA+ AS +F++A Q L+ AI E
Sbjct: 1366 PRDLGHLLLGFFRRYSYTSKERLAPTTVLRVKDLTVDLGSAYRAMAASKDFAKAAQALSLAIAE 1429
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BLAST of mRNA_P-lacustris_contig987.16167.1 vs. uniprot
Match: A0A6H5JXD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD9_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.380e-10
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:   30 PLDLGHLLLGFFRRYCSSSEEGITPETVLHIQGLTVDLGSARRALVASTEFSEAFQTLASAIDE 93
            P DLG LLLGFFRRY  +S+E + P TVL ++ LTVDLGSA RA+ AS +F+ A Q L+ AI E
Sbjct: 1420 PRDLGQLLLGFFRRYSYTSKERLAPTTVLRVKDLTVDLGSAYRAMAASKDFARAAQALSLAIAE 1483
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig987.16167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHQ6_ECTSI9.470e-1260.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXD9_9PHAE1.380e-1059.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig987contigP-lacustris_contig987:68938..71128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig987.16167.1mRNA_P-lacustris_contig987.16167.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig987 68498..72889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig987.16167.1 ID=prot_P-lacustris_contig987.16167.1|Name=mRNA_P-lacustris_contig987.16167.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=275bp
MFELLVRFAFRGTTCLEPRLLLSGWCCRAPLDLGHLLLGFFRRYCSSSEE
GITPETVLHIQGLTVDLGSARRALVASTEFSEAFQTLASAIDEGSGNTGS
PDAESLADGGDWSNPMRSGDDHGFAGGAKGGRGEGGASCVGGADGNFQVS
EIAEVSADGRRPHSHPSSAVGVGVSEKRETTSWERLRGDGIGATDRPASQ
HRSGSSREPQRQRTEGDAQPRRRSILGRVIWGRTFAARGRPDSPLRAAPR
CLRVPQAQNRTGISSSRRRHAPVV*
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