prot_P-lacustris_contig982.16138.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig982.16138.1
Unique Name	prot_P-lacustris_contig982.16138.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	209

Homology

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: D7FSF1_ECTSI (Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF1_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 4.410e-145
Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNYNNVPPPAERSSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNYNNV PPA++SSCC
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNYNNVAPPADKSSCC 208

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: A0A835Z1V8_9STRA (Rab2A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V8_9STRA)

HSP 1 Score: 359 bits (922), Expect = 1.360e-124
Identity = 179/197 (90.86%), Postives = 186/197 (94.42%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNYNN 197
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQP+HDLTIGVEFGARMI++D RQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDL  RRAV+TKEGEQFA ENGLIFLETSAK A NVE AFI+TA KIY NI SGVYDPTNEAHG+KLGPAASLNY N
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPLHDLTIGVEFGARMINVDARQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLEHRRAVSTKEGEQFAAENGLIFLETSAKTAANVEAAFIQTAEKIYGNIQSGVYDPTNEAHGVKLGPAASLNYGN 197

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: A0A7S2CHD5_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2CHD5_9STRA)

HSP 1 Score: 347 bits (891), Expect = 6.470e-120
Identity = 175/208 (84.13%), Postives = 185/208 (88.94%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNYNNVPPPAERSSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM++IDNRQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEA+QNSN NMVIMLIGNKSDL  RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+ ILSGVYD TNEAHGIK+G       +N    +   +CC
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEAKQNSNPNMVIMLIGNKSDLDHRRAVSTKEGEQFAEENGLIFLETSAKTAANVEQAFIKTAEKIYEKILSGVYDVTNEAHGIKIGMNQHSGPDNNSGRSSNKACC 208

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: A0A7S2V0L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L3_9STRA)

HSP 1 Score: 345 bits (886), Expect = 1.150e-118
Identity = 174/192 (90.62%), Postives = 183/192 (95.31%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAAS 192
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+ID++Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TF+HLTRWLEEARQNSNSNMVIMLIGNKSDL  RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+NILSGVYD TNEAHGIK+G A S
Sbjct:   31 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTRWLEEARQNSNSNMVIMLIGNKSDLEHRRAVSTKEGEQFAEENGLIFLETSAKTAENVEAAFIKTAEKIYENILSGVYDVTNEAHGIKVGMAGS 222

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: M4B5K5_HYAAE (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=M4B5K5_HYAAE)

HSP 1 Score: 342 bits (876), Expect = 1.290e-117
Identity = 175/211 (82.94%), Postives = 187/211 (88.63%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLN---YNNVPPPAERSSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+I+N+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTA+KIY NI SGV D TNEAHGIK+G   S     + N  PPA +S CC
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTNEAHGIKMGMTGSPGPGGFGNSNPPA-KSGCC 210

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: A0A6V1NY85_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NY85_HETAK)

HSP 1 Score: 336 bits (861), Expect = 2.490e-115
Identity = 170/196 (86.73%), Postives = 180/196 (91.84%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNYN 196
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID+R++KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNK+DL  RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+NILSGVYD  +E+ GIK+G +     N
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIDIDSRKIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKADLEHRRAVSTKEGEQFAEENGLIFLETSAKTAQNVEDAFIKTAEKIYENILSGVYDIQSESSGIKVGMSGGQGGN 196

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: A0A485LBB8_9STRA (Aste57867_18783 protein n=7 Tax=Oomycota TaxID=4762 RepID=A0A485LBB8_9STRA)

HSP 1 Score: 335 bits (860), Expect = 3.660e-115
Identity = 174/215 (80.93%), Postives = 184/215 (85.58%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASL-------NYNNVPPPAERSSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDN+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNEAHGIK+G   S        N NN    A +  CC
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEAHGIKVGMTGSATPTGFGGNANN----ANKGGCC 211

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: A0A2D4BXC9_PYTIN (Rab2 family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXC9_PYTIN)

HSP 1 Score: 337 bits (864), Expect = 7.310e-114
Identity = 170/192 (88.54%), Postives = 178/192 (92.71%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAAS 192
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+IDN+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTAAKIY NI SGV D TNEAHGIK+G   S
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFVKTAAKIYSNIQSGVCDVTNEAHGIKVGMTGS 192

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: A0A024UMG6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMG6_9STRA)

HSP 1 Score: 332 bits (851), Expect = 2.290e-113
Identity = 172/215 (80.00%), Postives = 184/215 (85.58%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASL-------NYNNVPPPAERSSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+ID++Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNEAHGIK+G   S        N NN    A +  CC
Sbjct:   29 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEAHGIKVGMTGSATPTGFGGNGNN----ANKGGCC 239

[Close]

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Match: A0A8J5J3E0_9STRA (SWIB/MDM2 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J3E0_9STRA)

HSP 1 Score: 339 bits (869), Expect = 1.020e-112
Identity = 173/208 (83.17%), Postives = 185/208 (88.94%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLN---YNNVPPPAERS 205
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+I+N+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTA+KIY NI SGV D TNEAHGIK+G   S     + N  PPA R+
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTNEAHGIKVGMTGSPGPGGFGNSNPPANRA 208

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig982.16138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSF1_ECTSI	4.410e-145	98.56	Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835Z1V8_9STRA	1.360e-124	90.86	Rab2A, rab family GTPase n=1 Tax=Tribonema minus T...	[more]
A0A7S2CHD5_9STRA	6.470e-120	84.13	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
A0A7S2V0L3_9STRA	1.150e-118	90.63	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
M4B5K5_HYAAE	1.290e-117	82.94	Uncharacterized protein n=26 Tax=Oomycota TaxID=47...	[more]
A0A6V1NY85_HETAK	2.490e-115	86.73	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A485LBB8_9STRA	3.660e-115	80.93	Aste57867_18783 protein n=7 Tax=Oomycota TaxID=476...	[more]
A0A2D4BXC9_PYTIN	7.310e-114	88.54	Rab2 family GTPase, putative n=1 Tax=Pythium insid...	[more]
A0A024UMG6_9STRA	2.290e-113	80.00	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A8J5J3E0_9STRA	1.020e-112	83.17	SWIB/MDM2 domain-containing protein n=1 Tax=Phytop...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 30..46 score: 32.76 coord: 145..167 score: 44.2 coord: 7..28 score: 51.86 coord: 48..70 score: 50.19 coord: 110..123 score: 50.42
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..207 e-value: 5.1E-6 score: 35.9
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 9..167 e-value: 1.8E-10 score: 15.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 1.3E-102 score: 356.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 1.4E-31 score: 120.9
None	No IPR available	GENE3D	3.40.50.300		coord: 1..186 e-value: 2.4E-65 score: 221.7
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 3..192
None	No IPR available	PANTHER	PTHR24073:SF996		coord: 3..192
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..208 score: 34.828
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 2.3E-60 score: 202.9
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 1.9E-31 score: 107.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..178

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig982	contig	P-lacustris_contig982:49791..55840 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig982.16138.1	mRNA_P-lacustris_contig982.16138.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig982 49611..58094 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig982.16138.1 ID=prot_P-lacustris_contig982.16138.1|Name=mRNA_P-lacustris_contig982.16138.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=209bp
MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISI
DNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRW
LEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSA
KMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNYNNVPP
PAERSSCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase