prot_P-lacustris_contig981.16136.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig981.16136.1
Unique Nameprot_P-lacustris_contig981.16136.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length76
Homology
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BLAST of mRNA_P-lacustris_contig981.16136.1 vs. uniprot
Match: A0A6H5JBU5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU5_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.170e-19
Identity = 51/72 (70.83%), Postives = 56/72 (77.78%), Query Frame = 0 
Query:    1 MVAL-NHSMSKDDQVRAPTVPVGSTWQAIPENATIECRLQTMAQTGQTDQNRRLLYVEMLKEGHRDRERWGA 71
            MVAL N   SKDDQVR PT  VG TWQAIPENATIE RLQ +AQTGQ+ Q+RRLL+VEMLK+    RE WGA
Sbjct:  431 MVALVNSDASKDDQVRPPTAMVGDTWQAIPENATIETRLQRVAQTGQSSQDRRLLFVEMLKKTT-CRELWGA 501
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BLAST of mRNA_P-lacustris_contig981.16136.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 6.270e-19
Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 0 
Query:    1 MVALNHS-MSKDDQVRAPTVPVGSTWQAIPENATIECRLQTMAQTGQTDQNRRLLYVEMLKE 61
            MVAL HS  SKDDQVR PTV VG TWQAIPE+ATIE RLQ +AQTGQ+ Q+RRLLYVEMLK+
Sbjct:  439 MVALVHSDASKDDQVRPPTVVVGDTWQAIPEDATIETRLQRVAQTGQSCQDRRLLYVEMLKK 500
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig981.16136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBU5_9PHAE1.170e-1970.83SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JWW3_9PHAE6.270e-1977.42MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig981contigP-lacustris_contig981:76544..76771 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig981.16136.1mRNA_P-lacustris_contig981.16136.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig981 76544..76954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig981.16136.1 ID=prot_P-lacustris_contig981.16136.1|Name=mRNA_P-lacustris_contig981.16136.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=76bp
MVALNHSMSKDDQVRAPTVPVGSTWQAIPENATIECRLQTMAQTGQTDQN
RRLLYVEMLKEGHRDRERWGADGSS*
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