prot_P-lacustris_contig981.16135.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig981.16135.1
Unique Nameprot_P-lacustris_contig981.16135.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length52
Homology
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BLAST of mRNA_P-lacustris_contig981.16135.1 vs. uniprot
Match: A0A6H5JU34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU34_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 2.890e-8
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:    4 LEHNHPVEKDAVDEVRRQNKPLDTPTKEACEALTG 38
            L HNHPV K  VDEVRRQ KPLDTPTK+AC  LTG
Sbjct:  272 LNHNHPVNKGVVDEVRRQTKPLDTPTKDACVKLTG 306
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig981.16135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JU34_9PHAE2.890e-877.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig981contigP-lacustris_contig981:73263..74223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig981.16135.1mRNA_P-lacustris_contig981.16135.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig981 73204..74265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig981.16135.1 ID=prot_P-lacustris_contig981.16135.1|Name=mRNA_P-lacustris_contig981.16135.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=52bp
MNNLEHNHPVEKDAVDEVRRQNKPLDTPTKEACEALTGGKRCTTLTSCCK
R*
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